Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12154 Utricularia gibba HOM05D006172 ORTHO05D005515 9.1e-69 263.5 134 100.0
SGA_v2.0_scaffold4G01916 Striga asiatica HOM05D006172 ORTHO05D005515 1.3e-30 136.7 128 57.8
Oeu013635.1 Olea europaea HOM05D006172 ORTHO05D005515 1.1e-26 123.6 93 69.9
Oeu013636.1 Olea europaea HOM05D006172 ORTHO05D005515 1.1e-26 123.6 120 58.3
Migut.M01317 Erythranthe guttata HOM05D006172 ORTHO05D005515 4.3e-26 121.7 132 51.5
Lj1A1230T62 Lonicera japonica HOM05D006172 ORTHO05D005515 2.8e-25 119.0 108 59.3
Nitab4.5_0000096g0040 Nicotiana tabacum HOM05D006172 ORTHO05D005515 1.2e-23 113.6 109 60.6
Peaxi162Scf00627g00035 Petunia axillaris HOM05D006172 ORTHO05D005515 1.2e-23 113.6 105 61.0
Nitab4.5_0006322g0020 Nicotiana tabacum HOM05D006172 ORTHO05D005515 1.7e-22 109.8 119 57.1
CAN.G694.35 Capsicum annuum HOM05D006172 ORTHO05D005515 6.4e-22 107.8 125 54.4
ClCG01G022000 Citrullus lanatus HOM05D006172 ORTHO05D005515 8.3e-22 107.5 76 72.4
CAN.G694.33 Capsicum annuum HOM05D006172 ORTHO05D005515 1.4e-21 106.7 112 52.7
Eucgr.E04055 Eucalyptus grandis HOM05D006172 ORTHO05D005515 1.4e-21 106.7 113 54.0
MELO3C007389.2 Cucumis melo HOM05D006172 ORTHO05D005515 1.9e-21 106.3 64 79.7
HanXRQChr05g0129541 Helianthus annuus HOM05D006172 ORTHO05D005515 2.4e-21 105.9 77 71.4
HanXRQChr05g0129551 Helianthus annuus HOM05D006172 ORTHO05D005515 2.4e-21 105.9 77 71.4
Cc09_g01690 Coffea canephora HOM05D006172 ORTHO05D005515 3.2e-21 105.5 125 49.6
Sed0002789 Sechium edule HOM05D006172 ORTHO05D005515 3.2e-21 105.5 81 67.9
DCAR_028182 Daucus carota HOM05D006172 ORTHO05D005515 4.1e-21 105.1 109 56.9
Sopen05g034060 Solanum pennellii HOM05D006172 ORTHO05D005515 4.1e-21 105.1 82 68.3
COL.COLO4_31773 Corchorus olitorius HOM05D006172 ORTHO05D005515 7.1e-21 104.4 117 51.3
Lj4g0023330 Lotus japonicus HOM05D006172 ORTHO05D005515 7.1e-21 104.4 78 66.7
arahy.Tifrunner.gnm1.ann1.3R4FRS Arachis hypogaea HOM05D006172 ORTHO05D005515 9.2e-21 104.0 85 65.9
CANSAT56G2229 Cannabis sativa HOM05D006172 ORTHO05D005515 9.2e-21 104.0 113 56.6
Solyc05g055610.4 Solanum lycopersicum HOM05D006172 ORTHO05D005515 9.2e-21 104.0 82 67.1
AUR62021945 Chenopodium quinoa HOM05D006172 ORTHO05D005515 1.2e-20 103.6 132 49.2
ECA236G0092 Erigeron canadensis HOM05D006172 ORTHO05D005515 1.2e-20 103.6 77 68.8
Sc05g0009930 Simmondsia chinensis HOM05D006172 ORTHO05D005515 2.7e-20 102.4 87 65.5
THA.LOC104813121 Tarenaya hassleriana HOM05D006172 ORTHO05D005515 3.5e-20 102.1 119 50.4
Actinidia28669 Actinidia chinensis HOM05D006172 ORTHO05D005515 4.6e-20 101.7 98 59.2
Cpa.g.sc152.15 Carica papaya HOM05D006172 ORTHO05D005515 4.6e-20 101.7 72 76.4
Aqoxy1G02151 Aquilegia oxysepala HOM05D006172 ORTHO05D005515 6.0e-20 101.3 130 49.2
arahy.Tifrunner.gnm1.ann1.GS5NL2 Arachis hypogaea HOM05D006172 ORTHO05D005515 6.0e-20 101.3 83 65.1
PSO675G8381 Papaver somniferum HOM05D006172 ORTHO05D005515 6.0e-20 101.3 65 76.9
GSVIVG01012726001 Vitis vinifera HOM05D006172 ORTHO05D005515 6.0e-20 101.3 88 61.4
Lsat_1_v5_gn_7_15980 Lactuca sativa HOM05D006172 ORTHO05D005515 7.8e-20 100.9 76 69.7
Glyma.07G260400 Glycine max HOM05D006172 ORTHO05D005515 2.3e-19 99.4 74 64.9
VMungo1215G3219 Vigna mungo HOM05D006172 ORTHO05D005515 2.3e-19 99.4 75 66.7
Duzib192G0085 Durio zibethinus HOM05D006172 ORTHO05D005515 3.0e-19 99.0 93 57.0
TAR626G1786 Trochodendron aralioides HOM05D006172 ORTHO05D005515 3.0e-19 99.0 85 64.7
Nn1g07129 Nelumbo nucifera HOM05D006172 ORTHO05D005515 3.9e-19 98.6 63 77.8
HPP92_012316 Vanilla planifolia HOM05D006172 ORTHO05D005515 3.9e-19 98.6 83 62.7
Sc05g0009220 Simmondsia chinensis HOM05D006172 ORTHO05D005515 5.1e-19 98.2 87 65.5
Haze_06799 Corylus avellana HOM05D006172 ORTHO05D005515 6.6e-19 97.8 102 54.9
TWI38G1682 Tripterygium wilfordii HOM05D006172 ORTHO05D005515 6.6e-19 97.8 65 72.3
EL10Ac8g20057 Beta vulgaris HOM05D006172 ORTHO05D005515 8.6e-19 97.4 87 62.1
Gohir.A05G170200 Gossypium hirsutum HOM05D006172 ORTHO05D005515 8.6e-19 97.4 92 57.6
Lalb_Chr13g0304211 Lupinus albus HOM05D006172 ORTHO05D005515 8.6e-19 97.4 73 63.0
Rhsim13G0154200 Rhododendron simsii HOM05D006172 ORTHO05D005515 8.6e-19 97.4 96 59.4
MD10G1321300 Malus domestica HOM05D006172 ORTHO05D005515 1.1e-18 97.1 70 68.6
Aa31LG9G9740 Aethionema arabicum HOM05D006172 ORTHO05D005515 1.5e-18 96.7 77 68.8
AT4G04670 Arabidopsis thaliana HOM05D006172 ORTHO05D005515 1.5e-18 96.7 78 66.7
Carub.0006s3250 Capsella rubella HOM05D006172 ORTHO05D005515 1.5e-18 96.7 67 76.1
Thhalv10028391m.g Eutrema salsugineum HOM05D006172 ORTHO05D005515 1.5e-18 96.7 77 68.8
Hund21409 Selenicereus undatus HOM05D006172 ORTHO05D005515 1.5e-18 96.7 79 68.4
Gohir.D05G173300 Gossypium hirsutum HOM05D006172 ORTHO05D005515 1.9e-18 96.3 92 56.5
Gorai.009G178500 Gossypium raimondii HOM05D006172 ORTHO05D005515 1.9e-18 96.3 92 56.5
RcHm_v2.0_Chr5g0003171 Rosa chinensis HOM05D006172 ORTHO05D005515 1.9e-18 96.3 82 64.6
AL6G48130 Arabidopsis lyrata HOM05D006172 ORTHO05D005515 2.5e-18 95.9 98 58.2
Medtr4g132120 Medicago truncatula HOM05D006172 ORTHO05D005515 2.5e-18 95.9 65 72.3
Psat4g006680 Pisum sativum HOM05D006172 ORTHO05D005515 2.5e-18 95.9 65 72.3
Sp6g04230 Schrenkiella parvula HOM05D006172 ORTHO05D005515 2.5e-18 95.9 121 52.1
Ca_21083_v3 Cicer arietinum L. HOM05D006172 ORTHO05D005515 3.3e-18 95.5 124 45.2
CARHR252880 Cardamine hirsuta HOM05D006172 ORTHO05D005515 4.3e-18 95.1 78 66.7
CSS0050420 Camellia sinensis var. sinensis HOM05D006172 ORTHO05D005515 7.3e-18 94.4 133 42.9
AUR62012709 Chenopodium quinoa HOM05D006172 ORTHO05D005515 7.3e-18 94.4 79 65.8
Ah.09g234910 Amaranthus hybridus HOM05D006172 ORTHO05D005515 1.2e-17 93.6 85 61.2
BcaB01g02576 Brassica carinata HOM05D006172 ORTHO05D005515 1.6e-17 93.2 89 61.8
vmacro03686 Vaccinium macrocarpon HOM05D006172 ORTHO05D005515 2.1e-17 92.8 80 65.0
FvH4_3g02080 Fragaria vesca HOM05D006172 ORTHO05D005515 2.8e-17 92.4 70 68.6
FAN21G3941 Fragaria x ananassa HOM05D006172 ORTHO05D005515 2.8e-17 92.4 70 68.6
FAN25G0496 Fragaria x ananassa HOM05D006172 ORTHO05D005515 2.8e-17 92.4 70 68.6
PGR042G0524 Punica granatum HOM05D006172 ORTHO05D005515 2.8e-17 92.4 80 63.8
Atru.chr10.2219 Acer truncatum HOM05D006172 ORTHO05D005515 4.7e-17 91.7 75 60.0
Atru.chr10.2224 Acer truncatum HOM05D006172 ORTHO05D005515 4.7e-17 91.7 75 60.0
CSS0038964 Camellia sinensis var. sinensis HOM05D006172 ORTHO05D005515 4.7e-17 91.7 87 55.2
ATR0794G123 Amborella trichopoda HOM05D006172 ORTHO05D005515 6.2e-17 91.3 86 55.8
BraA03t12201Z Brassica rapa HOM05D006172 ORTHO05D005515 8.1e-17 90.9 111 53.2
C03p36400 Brassica napus HOM05D006172 ORTHO05D005515 1.1e-16 90.5 85 61.2
BolC3t15953H Brassica oleracea HOM05D006172 ORTHO05D005515 1.1e-16 90.5 85 61.2
A03p30170 Brassica napus HOM05D006172 ORTHO05D005515 1.4e-16 90.1 85 61.2
Potri.004G015200 Populus trichocarpa HOM05D006172 ORTHO05D005515 6.8e-16 87.8 87 54.0
Sabra04G0007400 Salix brachista HOM05D006172 ORTHO05D005515 1.5e-15 86.7 86 55.8
QL05p073195 Quercus lobata HOM05D006172 ORTHO05D005515 2.0e-15 86.3 64 71.9
AagrBONN_evm.TU.Sc2ySwM_362.1355 Anthoceros agrestis HOM05D006172 ORTHO05D005515 3.4e-15 85.5 99 48.5
SEGI_01208 Sequoiadendron giganteum HOM05D006172 ORTHO05D005515 3.4e-15 85.5 126 37.3
SHI02199 Sapria himalayana HOM05D006172 ORTHO05D005515 4.4e-15 85.1 64 67.2
SMO139G0125 Selaginella moellendorffii HOM05D006172 ORTHO05D005515 9.9e-15 84.0 115 43.5
Ciclev10018338m.g Citrus clementina HOM05D006172 ORTHO05D005515 3.2e-13 79.0 65 56.9
CBR_g49836 Chara braunii HOM05D006172 ORTHO05D004693 9.2e-13 77.4 64 53.1
Mapoly0137s0034 Marchantia polymorpha HOM05D006172 ORTHO05D005515 1.2e-12 77.0 64 56.2
Pp3c9_15020 Physcomitrium patens HOM05D006172 ORTHO05D005515 1.0e-11 73.9 71 49.3
MCO05G475 Micromonas commoda HOM05D006172 ORTHO05D005515 5.2e-08 61.6 71 43.7
Zm00001eb322630 Zea mays HOM05D006172 ORTHO05D005515 6.8e-08 61.2 55 58.2
PRCOL_00000475 Prasinoderma coloniale HOM05D006172 ORTHO05D005515 2.2e-06 56.2 64 43.8


User provided reference genes

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