Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g9755 Utricularia gibba HOM05D006110 ORTHO05D007774 0.0e+00 1169.8 585 100.0
MSTRG.16978 Avicennia marina HOM05D006110 ORTHO05D007774 1.4e-243 846.3 591 73.6
Cfa010950 Carpinus fangiana HOM05D006110 ORTHO05D007774 6.7e-233 810.8 588 70.9
Dinv11233 Davidia involucrata HOM05D006110 ORTHO05D007774 2.9e-228 795.4 566 71.7
CiPaw.06G056300 Carya illinoinensis HOM05D006110 ORTHO05D007774 8.4e-228 793.9 588 69.7
QL04p021435 Quercus lobata HOM05D006110 ORTHO05D007774 2.7e-226 788.9 586 69.6
QL07p029279 Quercus lobata HOM05D006110 ORTHO05D007774 2.7e-226 788.9 586 69.6
GSVIVG01036611001 Vitis vinifera HOM05D006110 ORTHO05D007774 6.0e-226 787.7 592 69.1
GSVIVG01036631001 Vitis vinifera HOM05D006110 ORTHO05D007774 7.9e-226 787.3 592 69.1
Sed0024249 Sechium edule HOM05D006110 ORTHO05D007774 5.1e-225 784.6 583 69.3
Manes.04G156400 Manihot esculenta HOM05D006110 ORTHO05D007774 1.9e-224 782.7 588 69.2
CAN.G134.27 Capsicum annuum HOM05D006110 ORTHO05D007774 3.3e-224 781.9 567 70.7
CANSAT56G0825 Cannabis sativa HOM05D006110 ORTHO05D007774 2.8e-223 778.9 590 69.7
Haze_02994 Corylus avellana HOM05D006110 ORTHO05D007774 3.7e-223 778.5 559 71.2
Migut.B01193 Erythranthe guttata HOM05D006110 ORTHO05D007774 1.8e-222 776.2 597 68.5
RcHm_v2.0_Chr1g0327151 Rosa chinensis HOM05D006110 ORTHO05D007774 9.0e-222 773.9 595 67.4
CsaV3_5G023770 Cucumis sativus L. HOM05D006110 ORTHO05D007774 1.5e-221 773.1 583 68.8
Prupe.7G006200 Prunus persica HOM05D006110 ORTHO05D007774 1.5e-221 773.1 590 68.5
EL10Ac7g17197 Beta vulgaris HOM05D006110 ORTHO05D007774 2.0e-221 772.7 591 68.9
ECA233G5267 Erigeron canadensis HOM05D006110 ORTHO05D007774 2.0e-221 772.7 584 68.5
Rhsim07G0069200 Rhododendron simsii HOM05D006110 ORTHO05D007774 2.6e-221 772.3 623 65.7
COL.COLO4_06638 Corchorus olitorius HOM05D006110 ORTHO05D007774 3.4e-221 771.9 596 66.8
Sopen01g040330 Solanum pennellii HOM05D006110 ORTHO05D007774 1.3e-220 770.0 570 69.1
Duzib106G1787 Durio zibethinus HOM05D006110 ORTHO05D007774 1.7e-220 769.6 603 67.2
Peaxi162Scf00220g00411 Petunia axillaris HOM05D006110 ORTHO05D007774 2.9e-220 768.8 587 67.6
Solyc01g096600.4 Solanum lycopersicum HOM05D006110 ORTHO05D007774 8.5e-220 767.3 568 68.8
MELO3C022813.2 Cucumis melo HOM05D006110 ORTHO05D007774 1.1e-219 766.9 583 68.1
Eucgr.E03954 Eucalyptus grandis HOM05D006110 ORTHO05D007774 4.2e-219 765.0 597 66.8
Potri.001G031700 Populus trichocarpa HOM05D006110 ORTHO05D007774 1.2e-218 763.5 563 70.5
HanXRQChr02g0048711 Helianthus annuus HOM05D006110 ORTHO05D007774 1.6e-218 763.1 578 68.3
FAN03G2625 Fragaria x ananassa HOM05D006110 ORTHO05D007774 2.1e-218 762.7 589 67.4
Atru.chr12.1309 Acer truncatum HOM05D006110 ORTHO05D007774 4.6e-218 761.5 589 67.7
Potri.003G194000 Populus trichocarpa HOM05D006110 ORTHO05D007774 1.3e-217 760.0 567 69.1
Actinidia07968 Actinidia chinensis HOM05D006110 ORTHO05D007774 6.7e-217 757.7 504 75.8
THA.LOC104826748 Tarenaya hassleriana HOM05D006110 ORTHO05D007774 7.4e-216 754.2 604 65.1
Glyma.04G133800 Glycine max HOM05D006110 ORTHO05D007774 1.7e-215 753.1 586 68.1
Ciclev10000631m.g Citrus clementina HOM05D006110 ORTHO05D007774 2.4e-214 749.2 583 66.7
FvH4_7g03810 Fragaria vesca HOM05D006110 ORTHO05D007774 1.5e-213 746.5 618 64.6
VMungo1080G0231 Vigna mungo HOM05D006110 ORTHO05D007774 1.5e-213 746.5 584 67.6
FAN10G4343 Fragaria x ananassa HOM05D006110 ORTHO05D007774 4.5e-213 745.0 600 65.8
arahy.Tifrunner.gnm1.ann1.Y0U2QZ Arachis hypogaea HOM05D006110 ORTHO05D007774 7.7e-213 744.2 580 67.8
Lsat_1_v5_gn_6_13001 Lactuca sativa HOM05D006110 ORTHO05D007774 7.7e-213 744.2 511 72.0
arahy.Tifrunner.gnm1.ann1.P4BN3A Arachis hypogaea HOM05D006110 ORTHO05D007774 1.0e-212 743.8 580 67.8
Gorai.012G019300 Gossypium raimondii HOM05D006110 ORTHO05D007774 1.3e-212 743.4 590 65.6
Gohir.A05G399300 Gossypium hirsutum HOM05D006110 ORTHO05D007774 1.7e-212 743.0 590 65.8
Lj3g0023685 Lotus japonicus HOM05D006110 ORTHO05D007774 2.2e-212 742.7 585 67.9
CSS0009585 Camellia sinensis var. sinensis HOM05D006110 ORTHO05D007774 3.8e-212 741.9 570 69.1
MD14G1003800 Malus domestica HOM05D006110 ORTHO05D007774 7.2e-211 737.6 589 66.9
Psat5g221960 Pisum sativum HOM05D006110 ORTHO05D007774 4.7e-210 734.9 578 68.2
Sc17g0003940 Simmondsia chinensis HOM05D006110 ORTHO05D007774 7.9e-210 734.2 505 73.7
Nn8g38623 Nelumbo nucifera HOM05D006110 ORTHO05D007774 5.1e-209 731.5 584 65.4
TPR.G7074 Trifolium pratense HOM05D006110 ORTHO05D007774 5.1e-209 731.5 573 67.5
SGA_v2.0_scaffold342G49409 Striga asiatica HOM05D006110 ORTHO05D007774 8.8e-209 730.7 619 65.1
Phvul.005G004500 Phaseolus vulgaris HOM05D006110 ORTHO05D007774 2.0e-208 729.6 560 68.8
FAN06G2813 Fragaria x ananassa HOM05D006110 ORTHO05D007774 7.4e-208 727.6 643 61.9
CARHR203490 Cardamine hirsuta HOM05D006110 ORTHO05D007774 1.3e-207 726.9 584 64.9
AL6G20270 Arabidopsis lyrata HOM05D006110 ORTHO05D007774 2.2e-207 726.1 574 64.5
AT5G09860 Arabidopsis thaliana HOM05D006110 ORTHO05D007774 6.3e-207 724.5 574 64.3
TAR625G0603 Trochodendron aralioides HOM05D006110 ORTHO05D007774 6.3e-207 724.5 561 67.2
vmacro13769 Vaccinium macrocarpon HOM05D006110 ORTHO05D007774 1.4e-206 723.4 672 58.2
Aa31LG1G21560 Aethionema arabicum HOM05D006110 ORTHO05D007774 3.1e-206 722.2 592 63.7
Gohir.D04G016600 Gossypium hirsutum HOM05D006110 ORTHO05D007774 2.6e-205 719.2 590 64.2
Lalb_Chr20g0109671 Lupinus albus HOM05D006110 ORTHO05D007774 5.9e-205 718.0 572 66.4
Lalb_Chr20g0109811 Lupinus albus HOM05D006110 ORTHO05D007774 1.7e-204 716.5 572 66.4
Aqoxy3G04239 Aquilegia oxysepala HOM05D006110 ORTHO05D007774 6.5e-204 714.5 561 66.0
ATR0618G428 Amborella trichopoda HOM05D006110 ORTHO05D007774 3.6e-202 708.8 569 64.5
A02p00200 Brassica napus HOM05D006110 ORTHO05D007774 4.7e-202 708.4 575 64.2
MBI03_g05118_MAGBIO Magnolia biondii HOM05D006110 ORTHO05D007774 4.7e-202 708.4 566 65.2
PSO782G1399 Papaver somniferum HOM05D006110 ORTHO05D007774 1.8e-201 706.4 563 66.3
BcaB05g21524 Brassica carinata HOM05D006110 ORTHO05D007774 3.0e-201 705.7 564 64.2
PSO063G0799 Papaver somniferum HOM05D006110 ORTHO05D007774 3.0e-201 705.7 563 65.9
Oeu014626.1 Olea europaea HOM05D006110 ORTHO05D007774 2.0e-200 703.0 521 70.2
SalBow5G1256 Salvia bowleyana HOM05D006110 ORTHO05D007774 2.0e-200 703.0 593 64.8
Carub.0006s0829 Capsella rubella HOM05D006110 ORTHO05D007774 2.6e-200 702.6 583 63.1
Sp6g33550 Schrenkiella parvula HOM05D006110 ORTHO05D007774 3.7e-199 698.7 509 68.6
Nn3g19142 Nelumbo nucifera HOM05D006110 ORTHO05D007774 4.8e-199 698.4 486 71.8
C02p04120 Brassica napus HOM05D006110 ORTHO05D007774 1.4e-198 696.8 593 62.1
Ah.08g212940 Amaranthus hybridus HOM05D006110 ORTHO05D007774 9.1e-198 694.1 613 62.2
BraA02t05004Z Brassica rapa HOM05D006110 ORTHO05D007774 1.6e-197 693.3 585 62.1
BolC2t06374H Brassica oleracea HOM05D006110 ORTHO05D007774 7.7e-197 691.0 597 61.3
PGR031G3177 Punica granatum HOM05D006110 ORTHO05D007774 1.6e-194 683.3 564 64.5
Thhalv10013059m.g Eutrema salsugineum HOM05D006110 ORTHO05D007774 4.7e-194 681.8 573 62.5
BcaC03g13281 Brassica carinata HOM05D006110 ORTHO05D007774 4.4e-192 675.2 577 61.5
COL.COLO4_19610 Corchorus olitorius HOM05D006110 ORTHO05D007774 9.7e-192 674.1 621 58.8
Os03g0110400 Oryza sativa ssp. japonica HOM05D006110 ORTHO05D007774 3.8e-188 662.1 576 60.9
CDE05G1199 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 5.0e-188 661.8 551 63.5
Nitab4.5_0002838g0090 Nicotiana tabacum HOM05D006110 ORTHO05D007774 5.5e-187 658.3 502 67.9
Zm00001eb000780 Zea mays HOM05D006110 ORTHO05D007774 9.8e-184 647.5 567 61.4
Sabra01G0022800 Salix brachista HOM05D006110 ORTHO05D007774 1.6e-181 640.2 625 57.6
AUR62036785 Chenopodium quinoa HOM05D006110 ORTHO05D007774 1.7e-180 636.7 594 60.3
AUR62033702 Chenopodium quinoa HOM05D006110 ORTHO05D007774 1.2e-178 630.6 722 52.2
Mapoly0007s0076 Marchantia polymorpha HOM05D006110 ORTHO05D007774 2.8e-170 602.8 551 57.0
SMO134G0202 Selaginella moellendorffii HOM05D006110 ORTHO05D007774 1.8e-169 600.1 516 60.3
Thecc.10G142600 Theobroma cacao HOM05D006110 ORTHO05D007774 3.4e-168 595.9 461 67.7
AagrBONN_evm.TU.Sc2ySwM_228.3473 Anthoceros agrestis HOM05D006110 ORTHO05D007774 5.4e-166 588.6 565 55.9
AagrBONN_evm.TU.Sc2ySwM_228.3474 Anthoceros agrestis HOM05D006110 ORTHO05D007774 1.2e-165 587.4 564 55.9
Cc00_g06110 Coffea canephora HOM05D006110 ORTHO05D007774 6.6e-164 581.6 471 66.2
Pp3c2_4660 Physcomitrium patens HOM05D006110 ORTHO05D007774 8.6e-164 581.3 538 56.3
ClCG05G014210 Citrullus lanatus HOM05D006110 ORTHO05D007774 4.7e-138 495.7 460 59.8
TPR.G1403 Trifolium pratense HOM05D006110 ORTHO05D007774 6.7e-124 448.7 390 61.5
DCAR_022366 Daucus carota HOM05D006110 ORTHO05D007774 1.6e-122 444.1 387 62.0
Lj9C658T8 Lonicera japonica HOM05D006110 ORTHO05D007774 5.5e-118 429.1 264 81.1
HPP92_005051 Vanilla planifolia HOM05D006110 ORTHO05D007774 5.5e-118 429.1 308 69.5
SEGI_32708 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 2.8e-114 416.8 277 75.1
CBR_g45491 Chara braunii HOM05D006110 ORTHO05D007774 3.3e-107 393.3 551 43.2
Cpa.g.sc51.83 Carica papaya HOM05D006110 ORTHO05D007774 2.7e-101 373.6 267 68.5
Nitab4.5_0004168g0080 Nicotiana tabacum HOM05D006110 ORTHO05D007774 5.9e-96 355.9 322 60.6
Hund24435 Selenicereus undatus HOM05D006110 ORTHO05D007774 1.7e-90 337.8 258 67.4
Sed0017067 Sechium edule HOM05D006110 ORTHO05D007774 1.6e-80 304.7 187 79.7
Hund12548 Selenicereus undatus HOM05D006110 ORTHO05D007774 2.1e-69 267.7 251 58.6
PRCOL_00001172 Prasinoderma coloniale HOM05D006110 ORTHO05D007774 4.1e-65 253.4 446 35.2
HPP92_005075 Vanilla planifolia HOM05D006110 ORTHO05D007774 4.4e-59 233.4 281 47.3
Lj9A658T58 Lonicera japonica HOM05D006110 ORTHO05D007774 2.6e-51 207.6 197 60.9
Cc00_g06120 Coffea canephora HOM05D006110 ORTHO05D007774 3.4e-43 180.6 111 80.2
CANSAT01G0073 Cannabis sativa HOM05D006110 ORTHO05D007774 7.5e-43 179.5 151 64.2
CDE05G0354 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 5.4e-41 173.3 352 35.8
Oeu014625.1 Olea europaea HOM05D006110 ORTHO05D007774 8.6e-39 166.0 162 58.6
SEGI_24206 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 2.3e-36 157.9 191 49.2
CDE05G3545 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 7.6e-35 152.9 113 66.4
ClCG05G014240 Citrullus lanatus HOM05D006110 ORTHO05D007774 2.9e-34 151.0 193 48.2
CANSAT01G1515 Cannabis sativa HOM05D006110 ORTHO05D007774 7.6e-27 126.3 110 60.0
SEGI_05467 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 4.9e-26 123.6 87 60.9
Actinidia06221 Actinidia chinensis HOM05D006110 ORTHO05D007774 1.0e-23 115.9 176 44.9
Lj9C658T10 Lonicera japonica HOM05D006110 ORTHO05D007774 1.3e-23 115.5 66 77.3
Cre16.g695300 Chlamydomonas reinhardtii HOM05D006110 ORTHO05D007774 3.0e-23 114.4 433 27.0


User provided reference genes

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