Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g5878 Utricularia gibba HOM05D006543 ORTHO05D008308 6.9e-237 823.5 408 100.0
MSTRG.11294 Avicennia marina HOM05D006543 ORTHO05D008308 2.6e-151 539.3 384 66.9
Oeu045480.1 Olea europaea HOM05D006543 ORTHO05D008308 2.4e-149 532.7 384 65.4
Nitab4.5_0004750g0040 Nicotiana tabacum HOM05D006543 ORTHO05D008308 1.5e-146 523.5 385 64.9
Sopen03g030490 Solanum pennellii HOM05D006543 ORTHO05D008308 1.5e-146 523.5 387 64.1
Lj5A100T59 Lonicera japonica HOM05D006543 ORTHO05D008308 2.5e-146 522.7 385 64.4
Cc04_g10340 Coffea canephora HOM05D006543 ORTHO05D008308 4.3e-146 521.9 385 66.0
CAN.G352.10 Capsicum annuum HOM05D006543 ORTHO05D008308 7.4e-146 521.2 385 65.2
PGSC0003DMG400015239 Solanum tuberosum HOM05D006543 ORTHO05D008308 1.6e-145 520.0 387 63.8
Peaxi162Scf00089g00625 Petunia axillaris HOM05D006543 ORTHO05D008308 3.7e-145 518.8 386 66.1
Solyc03g111360.3 Solanum lycopersicum HOM05D006543 ORTHO05D008308 3.7e-145 518.8 387 63.6
Nitab4.5_0003282g0090 Nicotiana tabacum HOM05D006543 ORTHO05D008308 1.4e-144 516.9 385 64.2
Thecc.03G122600 Theobroma cacao HOM05D006543 ORTHO05D008308 5.8e-143 511.5 385 63.9
QL10p005246 Quercus lobata HOM05D006543 ORTHO05D008308 7.6e-143 511.1 385 63.1
Hma1.2p1_0046F.1_g027560 Hydrangea macrophylla HOM05D006543 ORTHO05D008308 1.3e-142 510.4 385 64.7
Actinidia37252 Actinidia chinensis HOM05D006543 ORTHO05D008308 4.9e-142 508.4 385 64.4
TAR374G1424 Trochodendron aralioides HOM05D006543 ORTHO05D008308 1.4e-141 506.9 385 63.1
CSS0036636 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 4.2e-141 505.4 383 63.4
Hund18538 Selenicereus undatus HOM05D006543 ORTHO05D008308 5.5e-141 505.0 382 62.8
TWI14G0972 Tripterygium wilfordii HOM05D006543 ORTHO05D008308 7.1e-141 504.6 383 62.7
MELO3C026233.2 Cucumis melo HOM05D006543 ORTHO05D008308 9.3e-141 504.2 385 62.9
COL.COLO4_09265 Corchorus olitorius HOM05D006543 ORTHO05D008308 4.6e-140 501.9 384 63.8
RcHm_v2.0_Chr7g0191211 Rosa chinensis HOM05D006543 ORTHO05D008308 4.6e-140 501.9 384 64.1
Prupe.5G157200 Prunus persica HOM05D006543 ORTHO05D008308 7.9e-140 501.1 381 63.5
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 1.0e-139 500.7 385 61.8
FvH4_5g07331 Fragaria vesca HOM05D006543 ORTHO05D008308 1.8e-139 500.0 383 64.0
Atru.chr9.1008 Acer truncatum HOM05D006543 ORTHO05D008308 3.0e-139 499.2 384 63.8
CiPaw.11G012100 Carya illinoinensis HOM05D006543 ORTHO05D008308 6.7e-139 498.0 385 61.6
CsaV3_1G000810 Cucumis sativus L. HOM05D006543 ORTHO05D008308 6.7e-139 498.0 385 61.8
MD14G1163800 Malus domestica HOM05D006543 ORTHO05D008308 6.7e-139 498.0 382 62.3
Manes.06G115100 Manihot esculenta HOM05D006543 ORTHO05D008308 6.7e-139 498.0 385 60.8
vmacro16708 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 6.7e-139 498.0 384 62.8
CANSAT80G2173 Cannabis sativa HOM05D006543 ORTHO05D008308 1.1e-138 497.3 386 62.7
AUR62001276 Chenopodium quinoa HOM05D006543 ORTHO05D008308 1.1e-138 497.3 385 61.0
Potri.012G092900 Populus trichocarpa HOM05D006543 ORTHO05D008308 2.5e-138 496.1 384 62.0
Sabra12G0067500 Salix brachista HOM05D006543 ORTHO05D008308 3.3e-138 495.7 384 61.5
Aqoxy5G03584 Aquilegia oxysepala HOM05D006543 ORTHO05D008308 9.6e-138 494.2 385 61.8
AUR62025730 Chenopodium quinoa HOM05D006543 ORTHO05D008308 1.3e-137 493.8 385 60.5
Ciclev10020014m.g Citrus clementina HOM05D006543 ORTHO05D008308 1.3e-137 493.8 386 62.7
Rhsim12G0172000 Rhododendron simsii HOM05D006543 ORTHO05D008308 2.8e-137 492.7 384 61.2
EL10Ac7g18072 Beta vulgaris HOM05D006543 ORTHO05D008308 6.2e-137 491.5 385 61.3
Sed0023544 Sechium edule HOM05D006543 ORTHO05D008308 1.4e-136 490.3 385 62.9
arahy.Tifrunner.gnm1.ann1.8LT8QW Arachis hypogaea HOM05D006543 ORTHO05D008308 2.4e-136 489.6 389 60.4
ECA246G2708 Erigeron canadensis HOM05D006543 ORTHO05D008308 2.4e-136 489.6 384 61.2
Duzib068G0092 Durio zibethinus HOM05D006543 ORTHO05D008308 3.1e-136 489.2 385 61.0
AL8G40370 Arabidopsis lyrata HOM05D006543 ORTHO05D008308 6.9e-136 488.0 385 59.5
AT5G63290 Arabidopsis thaliana HOM05D006543 ORTHO05D008308 1.2e-135 487.3 385 59.5
BcaNung06574 Brassica carinata HOM05D006543 ORTHO05D008308 1.5e-135 486.9 386 59.3
Sp2g26410 Schrenkiella parvula HOM05D006543 ORTHO05D008308 1.5e-135 486.9 385 59.0
Glyma.04G192800 Glycine max HOM05D006543 ORTHO05D008308 2.6e-135 486.1 393 59.0
arahy.Tifrunner.gnm1.ann1.YD5AXN Arachis hypogaea HOM05D006543 ORTHO05D008308 3.4e-135 485.7 389 60.2
PGR044G1877 Punica granatum HOM05D006543 ORTHO05D008308 4.5e-135 485.3 387 61.8
SGA_v2.0_scaffold338G49246 Striga asiatica HOM05D006543 ORTHO05D008308 4.5e-135 485.3 386 62.7
Gorai.006G270300 Gossypium raimondii HOM05D006543 ORTHO05D008308 5.8e-135 485.0 384 61.2
HanXRQChr05g0154751 Helianthus annuus HOM05D006543 ORTHO05D008308 5.8e-135 485.0 384 60.2
Thhalv10004112m.g Eutrema salsugineum HOM05D006543 ORTHO05D008308 7.6e-135 484.6 385 59.0
Gohir.A09G244900 Gossypium hirsutum HOM05D006543 ORTHO05D008308 1.3e-134 483.8 384 61.2
Lsat_1_v5_gn_5_13221 Lactuca sativa HOM05D006543 ORTHO05D008308 1.3e-134 483.8 385 60.3
GSVIVG01007545001 Vitis vinifera HOM05D006543 ORTHO05D008308 1.7e-134 483.4 384 62.8
Carub.0008s2404 Capsella rubella HOM05D006543 ORTHO05D008308 4.9e-134 481.9 385 59.0
Migut.I00467 Erythranthe guttata HOM05D006543 ORTHO05D008308 4.9e-134 481.9 392 61.0
Sc04g0000970 Simmondsia chinensis HOM05D006543 ORTHO05D008308 4.9e-134 481.9 385 60.5
Lalb_Chr08g0236931 Lupinus albus HOM05D006543 ORTHO05D008308 6.5e-134 481.5 386 60.4
Aa31LG1G18710 Aethionema arabicum HOM05D006543 ORTHO05D008308 8.4e-134 481.1 385 59.5
BolC9t53839H Brassica oleracea HOM05D006543 ORTHO05D008308 1.4e-133 480.3 385 58.7
TPR.G24245 Trifolium pratense HOM05D006543 ORTHO05D008308 1.4e-133 480.3 398 59.0
Phvul.009G169000 Phaseolus vulgaris HOM05D006543 ORTHO05D008308 2.5e-133 479.6 391 59.8
C09p09260 Brassica napus HOM05D006543 ORTHO05D008308 4.2e-133 478.8 383 59.0
A09p08200 Brassica napus HOM05D006543 ORTHO05D008308 5.5e-133 478.4 383 59.5
BraA09t36471Z Brassica rapa HOM05D006543 ORTHO05D008308 7.1e-133 478.0 383 59.5
Lj1g0002208 Lotus japonicus HOM05D006543 ORTHO05D008308 9.3e-133 477.6 392 60.5
ClCG06G017630 Citrullus lanatus HOM05D006543 ORTHO05D008308 1.2e-132 477.2 385 60.5
Medtr3g075110 Medicago truncatula HOM05D006543 ORTHO05D008308 1.2e-132 477.2 394 59.1
Psat5g141840 Pisum sativum HOM05D006543 ORTHO05D008308 1.3e-131 473.8 393 58.5
THA.LOC104818195 Tarenaya hassleriana HOM05D006543 ORTHO05D008308 1.3e-131 473.8 388 58.0
Os12g0270100 Oryza sativa ssp. japonica HOM05D006543 ORTHO05D008308 1.1e-130 470.7 385 60.5
Gohir.D09G245800 Gossypium hirsutum HOM05D006543 ORTHO05D008308 4.3e-130 468.8 374 61.0
MBI06_g38704_MAGBIO Magnolia biondii HOM05D006543 ORTHO05D008308 2.8e-129 466.1 387 60.2
Zm00001eb001600 Zea mays HOM05D006543 ORTHO05D008308 2.8e-129 466.1 385 59.0
PSO729G0022 Papaver somniferum HOM05D006543 ORTHO05D008308 1.3e-126 457.2 385 59.5
CDE04G0939 Ceratophyllum demersum HOM05D006543 ORTHO05D008308 7.2e-125 451.4 386 57.0
Dinv11106 Davidia involucrata HOM05D006543 ORTHO05D008308 5.1e-123 445.3 317 67.2
FvH4_5g07462 Fragaria vesca HOM05D006543 ORTHO05D008308 2.5e-117 426.4 378 58.7
Ah.15g095320 Amaranthus hybridus HOM05D006543 ORTHO05D008308 1.2e-116 424.1 385 54.0
Ca_16091_v3 Cicer arietinum L. HOM05D006543 ORTHO05D008308 8.8e-115 417.9 341 59.8
Lsat_1_v5_gn_4_53181 Lactuca sativa HOM05D006543 ORTHO05D008308 7.4e-114 414.8 399 53.4
SEGI_06622 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 7.0e-112 408.3 422 50.5
VMungo1309G1872 Vigna mungo HOM05D006543 ORTHO05D008308 4.5e-111 405.6 318 59.7
Pp3c13_23570 Physcomitrium patens HOM05D006543 ORTHO05D008308 6.7e-107 391.7 386 50.0
Mapoly0005s0190 Marchantia polymorpha HOM05D006543 ORTHO05D008308 1.6e-100 370.5 435 44.8
SMO364G0036 Selaginella moellendorffii HOM05D006543 ORTHO05D008308 5.2e-91 339.0 393 45.5
ATR0733G153 Amborella trichopoda HOM05D006543 ORTHO05D008308 4.1e-88 329.3 363 46.6
Cre03.g171461 Chlamydomonas reinhardtii HOM05D006543 ORTHO05D008308 2.7e-87 326.6 351 47.0
vmacro23154 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 4.2e-85 319.3 253 60.5
CBR_g58805 Chara braunii HOM05D006543 ORTHO05D008308 9.5e-85 318.2 362 45.3
AagrBONN_evm.TU.Sc2ySwM_344.2040 Anthoceros agrestis HOM05D006543 ORTHO05D008308 1.5e-82 310.8 403 40.4
PRCOL_00001606 Prasinoderma coloniale HOM05D006543 ORTHO05D008308 1.1e-80 304.7 398 41.0
CSS0033277 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 8.0e-76 288.5 297 49.5
vmacro16659 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 8.0e-76 288.5 317 50.2
Glyma.06G173133 Glycine max HOM05D006543 ORTHO05D008308 9.8e-74 281.6 244 54.5
MCO01G029 Micromonas commoda HOM05D006543 ORTHO05D008308 2.0e-71 273.9 413 39.7
BcaB04g19911 Brassica carinata HOM05D006543 ORTHO05D008308 3.2e-64 250.0 175 68.6
CARHR277150 Cardamine hirsuta HOM05D006543 ORTHO05D008308 9.2e-64 248.4 177 67.2
Nn3g16581 Nelumbo nucifera HOM05D006543 ORTHO05D008308 5.1e-62 242.7 169 68.6
CARHR277160 Cardamine hirsuta HOM05D006543 ORTHO05D008308 5.6e-61 239.2 208 51.4
Actinidia36787 Actinidia chinensis HOM05D006543 ORTHO05D008308 3.6e-60 236.5 251 51.4
MD06G1157200 Malus domestica HOM05D006543 ORTHO05D008308 5.2e-59 232.6 204 58.8
BcaB01g05367 Brassica carinata HOM05D006543 ORTHO05D008308 1.4e-51 208.0 221 47.5
Oeu045471.1 Olea europaea HOM05D006543 ORTHO05D008308 8.1e-44 182.2 118 70.3
Oeu037566.1 Olea europaea HOM05D006543 ORTHO05D008308 6.9e-43 179.1 118 70.3
SEGI_28812 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 2.7e-39 167.2 137 60.6
CAN.G352.9 Capsicum annuum HOM05D006543 ORTHO05D003127 5.1e-38 162.9 116 71.6
CAN.G352.8 Capsicum annuum HOM05D006543 ORTHO05D008308 1.7e-25 121.3 99 58.6
MD06G1156000 Malus domestica HOM05D006543 ORTHO05D008308 1.7e-25 121.3 115 53.9
Glyma.06G173067 Glycine max HOM05D006543 ORTHO05D008308 1.1e-24 118.6 100 58.0
FvH4_5g07400 Fragaria vesca HOM05D006543 ORTHO05D008308 4.2e-24 116.7 110 58.2
Cfa009975 Carpinus fangiana HOM05D006543 ORTHO05D008308 3.0e-06 57.4 44 63.6


User provided reference genes

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