Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20911 Utricularia gibba HOM05D005064 ORTHO05D006611 0.0e+00 1750.7 887 100.0
MSTRG.18977 Avicennia marina HOM05D005064 ORTHO05D006611 2.4e-157 560.5 1079 38.8
SalBow5G0042 Salvia bowleyana HOM05D005064 ORTHO05D006611 2.3e-152 543.9 1052 38.3
SalBow5G1296 Salvia bowleyana HOM05D005064 ORTHO05D006611 2.3e-152 543.9 1052 38.3
Migut.J00101 Erythranthe guttata HOM05D005064 ORTHO05D006611 5.3e-149 532.7 1083 37.7
SGA_v2.0_scaffold85G26687 Striga asiatica HOM05D005064 ORTHO05D006611 8.5e-139 498.8 1062 36.4
CSS0042379 Camellia sinensis var. sinensis HOM05D005064 ORTHO05D006611 1.4e-120 438.3 1110 33.3
Lj2C68T2 Lonicera japonica HOM05D005064 ORTHO05D006611 2.3e-115 421.0 1045 34.0
GSVIVG01030280001 Vitis vinifera HOM05D005064 ORTHO05D006611 6.6e-115 419.5 1073 33.8
Dinv35394 Davidia involucrata HOM05D005064 ORTHO05D006611 9.5e-114 415.6 1071 34.2
Peaxi162Scf00744g00354 Petunia axillaris HOM05D005064 ORTHO05D006611 1.8e-112 411.4 1106 32.5
QL07p034075 Quercus lobata HOM05D005064 ORTHO05D006611 1.8e-112 411.4 1055 32.3
Duzib093G0745 Durio zibethinus HOM05D005064 ORTHO05D006611 4.4e-111 406.8 1099 32.0
Atru.chr8.2328 Acer truncatum HOM05D005064 ORTHO05D006611 5.4e-109 399.8 1095 32.1
vmacro04273 Vaccinium macrocarpon HOM05D005064 ORTHO05D006611 1.6e-108 398.3 1079 32.2
Haze_21075 Corylus avellana HOM05D005064 ORTHO05D006611 3.5e-108 397.1 1103 32.0
Sopen02g008440 Solanum pennellii HOM05D005064 ORTHO05D006611 3.5e-108 397.1 1077 32.2
Nitab4.5_0010437g0010 Nicotiana tabacum HOM05D005064 ORTHO05D006611 1.7e-107 394.8 1092 33.1
Cpa.g.sc5.230 Carica papaya HOM05D005064 ORTHO05D006611 3.0e-107 394.0 1061 32.8
Manes.09G111200 Manihot esculenta HOM05D005064 ORTHO05D006611 3.0e-107 394.0 1054 32.4
CAN.G989.4 Capsicum annuum HOM05D005064 ORTHO05D006611 1.2e-105 388.7 1060 32.5
AUR62030766 Chenopodium quinoa HOM05D005064 ORTHO05D006611 2.8e-105 387.5 1056 32.4
MELO3C009135.2 Cucumis melo HOM05D005064 ORTHO05D006611 2.8e-105 387.5 1079 31.5
Gorai.012G119100 Gossypium raimondii HOM05D005064 ORTHO05D006611 3.6e-105 387.1 1099 31.0
ClCG10G022430 Citrullus lanatus HOM05D005064 ORTHO05D006611 8.0e-105 386.0 1069 32.2
Cc06_g00810 Coffea canephora HOM05D005064 ORTHO05D006611 8.0e-105 386.0 1088 32.1
TAR633G1737 Trochodendron aralioides HOM05D005064 ORTHO05D006611 1.0e-104 385.6 1105 31.6
Thecc.05G007600 Theobroma cacao HOM05D005064 ORTHO05D006611 5.2e-104 383.3 1084 31.0
Ciclev10013403m.g Citrus clementina HOM05D005064 ORTHO05D006611 3.4e-103 380.6 1057 32.7
TWI74G0298 Tripterygium wilfordii HOM05D005064 ORTHO05D006611 4.4e-103 380.2 1076 32.8
EL10Ac5g12491 Beta vulgaris HOM05D005064 ORTHO05D006611 2.2e-102 377.9 1059 31.4
CsaV3_3G033440 Cucumis sativus L. HOM05D005064 ORTHO05D006611 1.9e-101 374.8 1067 31.6
AUR62030526 Chenopodium quinoa HOM05D005064 ORTHO05D006611 2.4e-101 374.4 1065 31.7
Sed0013669 Sechium edule HOM05D005064 ORTHO05D006611 2.4e-101 374.4 1063 31.9
Nn2g11003 Nelumbo nucifera HOM05D005064 ORTHO05D006611 1.2e-100 372.1 1154 30.4
Prupe.4G287200 Prunus persica HOM05D005064 ORTHO05D006611 3.5e-100 370.5 941 33.4
Eucgr.K02953 Eucalyptus grandis HOM05D005064 ORTHO05D006611 6.0e-100 369.8 1073 30.8
Lalb_Chr22g0360891 Lupinus albus HOM05D005064 ORTHO05D006611 1.3e-99 368.6 1071 31.3
HanXRQChr15g0486851 Helianthus annuus HOM05D005064 ORTHO05D006611 3.9e-99 367.1 1052 31.0
AT5G01630 Arabidopsis thaliana HOM05D005064 ORTHO05D006611 1.5e-98 365.2 1113 30.9
Potri.014G189600 Populus trichocarpa HOM05D005064 ORTHO05D006611 2.5e-98 364.4 1066 30.6
Carub.0006s0020 Capsella rubella HOM05D005064 ORTHO05D006611 3.3e-98 364.0 1115 30.8
MD01G1008700 Malus domestica HOM05D005064 ORTHO05D006611 1.2e-97 362.1 1148 30.3
Rhsim05G0225400 Rhododendron simsii HOM05D005064 ORTHO05D006611 1.6e-97 361.7 1075 30.9
Gohir.A04G095400 Gossypium hirsutum HOM05D005064 ORTHO05D006611 2.8e-97 360.9 880 33.6
Gohir.D04G135300 Gossypium hirsutum HOM05D005064 ORTHO05D006611 8.1e-97 359.4 899 32.7
Aa31sc411G40 Aethionema arabicum HOM05D005064 ORTHO05D006611 1.1e-96 359.0 1091 30.8
RcHm_v2.0_Chr3g0484931 Rosa chinensis HOM05D005064 ORTHO05D006611 1.4e-96 358.6 878 34.5
AL6G10420 Arabidopsis lyrata HOM05D005064 ORTHO05D006611 3.1e-96 357.5 1117 30.9
Thhalv10012491m.g Eutrema salsugineum HOM05D005064 ORTHO05D006611 3.1e-96 357.5 1133 30.5
Hund25531 Selenicereus undatus HOM05D005064 ORTHO05D006611 5.2e-96 356.7 1103 31.2
Thhalv10027627m.g Eutrema salsugineum HOM05D005064 ORTHO05D006611 1.2e-95 355.5 1046 30.7
Ca_16367_v3 Cicer arietinum L. HOM05D005064 ORTHO05D006611 2.6e-95 354.4 1058 31.1
Aa31LG1G23250 Aethionema arabicum HOM05D005064 ORTHO05D006611 1.7e-94 351.7 1097 29.8
SHI12869 Sapria himalayana HOM05D005064 ORTHO05D006611 1.1e-93 349.0 961 31.8
Glyma.13G010700 Glycine max HOM05D005064 ORTHO05D006611 1.9e-93 348.2 975 32.0
Sabra14G0144800 Salix brachista HOM05D005064 ORTHO05D006611 1.9e-93 348.2 1107 29.9
CANSAT35G0044 Cannabis sativa HOM05D005064 ORTHO05D006611 3.2e-93 347.4 1068 29.9
Lsat_1_v5_gn_5_149520 Lactuca sativa HOM05D005064 ORTHO05D006611 9.2e-93 345.9 1074 30.4
CARHR211980 Cardamine hirsuta HOM05D005064 ORTHO05D006611 3.5e-92 344.0 1110 29.5
AT4G00020 Arabidopsis thaliana HOM05D005064 ORTHO05D006611 4.6e-92 343.6 1121 30.3
Lj6g0012785 Lotus japonicus HOM05D005064 ORTHO05D006611 1.0e-91 342.4 997 30.9
Medtr3g083250 Medicago truncatula HOM05D005064 ORTHO05D006611 1.0e-91 342.4 893 31.8
VMungo0540G1710 Vigna mungo HOM05D005064 ORTHO05D006611 2.3e-91 341.3 971 30.7
BcaB01g06242 Brassica carinata HOM05D005064 ORTHO05D006611 4.3e-90 337.0 1054 30.8
arahy.Tifrunner.gnm1.ann1.168PWC Arachis hypogaea HOM05D005064 ORTHO05D006611 2.8e-89 334.3 1071 30.3
FAN23G3111 Fragaria x ananassa HOM05D005064 ORTHO05D006611 4.7e-89 333.6 851 34.1
Sp7g05130 Schrenkiella parvula HOM05D005064 ORTHO05D006611 6.2e-89 333.2 1046 30.1
A03p00180 Brassica napus HOM05D005064 ORTHO05D006611 1.4e-88 332.0 1048 30.8
THA.LOC104816179 Tarenaya hassleriana HOM05D005064 ORTHO05D006611 2.3e-88 331.3 1144 29.9
TPR.G19329 Trifolium pratense HOM05D005064 ORTHO05D006611 2.3e-88 331.3 918 31.0
arahy.Tifrunner.gnm1.ann1.XPQW08 Arachis hypogaea HOM05D005064 ORTHO05D006611 4.0e-88 330.5 1074 30.2
Ah.12g059020 Amaranthus hybridus HOM05D005064 ORTHO05D006611 5.2e-88 330.1 1017 31.3
Psat5g101280 Pisum sativum HOM05D005064 ORTHO05D006611 6.8e-88 329.7 887 32.0
BcaB01g06109 Brassica carinata HOM05D005064 ORTHO05D006611 2.0e-87 328.2 1075 30.3
THA.LOC104798645 Tarenaya hassleriana HOM05D005064 ORTHO05D006611 4.4e-87 327.0 1081 30.4
C03p00330 Brassica napus HOM05D005064 ORTHO05D006611 7.6e-87 326.2 1075 30.1
BraA03t09408Z Brassica rapa HOM05D005064 ORTHO05D006611 2.4e-85 321.2 1119 29.2
BolC3t12595H Brassica oleracea HOM05D005064 ORTHO05D006611 7.1e-85 319.7 1058 29.7
PSO339G1571 Papaver somniferum HOM05D005064 ORTHO05D006611 7.1e-85 319.7 958 31.0
Os01g0164800 Oryza sativa ssp. japonica HOM05D005064 ORTHO05D006611 3.5e-84 317.4 1076 27.9
BolC6t36909H Brassica oleracea HOM05D005064 ORTHO05D006611 4.6e-84 317.0 1053 29.6
A05p16640 Brassica napus HOM05D005064 ORTHO05D006611 8.6e-83 312.8 1046 29.0
C06p17140 Brassica napus HOM05D005064 ORTHO05D006611 1.5e-82 312.0 1047 29.0
ECA234G3016 Erigeron canadensis HOM05D005064 ORTHO05D006611 1.6e-81 308.5 1069 29.6
BraA05t20569Z Brassica rapa HOM05D005064 ORTHO05D006611 3.6e-81 307.4 1033 28.9
CiPaw.09G214500 Carya illinoinensis HOM05D005064 ORTHO05D006611 2.0e-79 301.6 493 39.6
COL.COLO4_14461 Corchorus olitorius HOM05D005064 ORTHO05D006611 2.0e-79 301.6 467 42.4
Aqoxy2G00779 Aquilegia oxysepala HOM05D005064 ORTHO05D006611 9.9e-79 299.3 901 30.4
FvH4_1g25820 Fragaria vesca HOM05D005064 ORTHO05D006611 3.8e-78 297.4 458 42.4
BcaC08g44292 Brassica carinata HOM05D005064 ORTHO05D006611 8.4e-78 296.2 1075 27.9
Zm00001eb419130 Zea mays HOM05D005064 ORTHO05D006611 5.4e-77 293.5 1054 28.7
ATR0594G137 Amborella trichopoda HOM05D005064 ORTHO05D006611 6.0e-76 290.0 1134 27.5
MBI03_g13049_MAGBIO Magnolia biondii HOM05D005064 ORTHO05D006611 1.7e-75 288.5 483 40.4
BcaB04g17743 Brassica carinata HOM05D005064 ORTHO05D006611 5.1e-75 287.0 950 29.3
HPP92_013842 Vanilla planifolia HOM05D005064 ORTHO05D006611 6.6e-75 286.6 1079 27.9
FAN19G0240 Fragaria x ananassa HOM05D005064 ORTHO05D006611 5.6e-74 283.5 494 39.5
FAN28G2142 Fragaria x ananassa HOM05D005064 ORTHO05D006611 1.3e-73 282.3 841 32.2
FAN26G2490 Fragaria x ananassa HOM05D005064 ORTHO05D006611 2.1e-73 281.6 371 45.3
PSO801G0135 Papaver somniferum HOM05D005064 ORTHO05D006611 6.2e-73 280.0 476 41.4
HPP92_013858 Vanilla planifolia HOM05D005064 ORTHO05D006611 2.6e-71 274.6 956 29.7
CSS0001431 Camellia sinensis var. sinensis HOM05D005064 ORTHO05D006611 3.4e-71 274.2 442 42.1
Nitab4.5_0001246g0050 Nicotiana tabacum HOM05D005064 ORTHO05D006611 4.9e-70 270.4 660 33.6
Sp6g40890 Schrenkiella parvula HOM05D005064 ORTHO05D006611 2.4e-69 268.1 472 38.6
Medtr6g033115 Medicago truncatula HOM05D005064 ORTHO05D006611 1.3e-67 262.3 425 40.2
Oeu027330.4 Olea europaea HOM05D005064 ORTHO05D006611 1.7e-67 261.9 313 50.8
DCAR_030962 Daucus carota HOM05D005064 ORTHO05D008158 4.3e-66 257.3 999 28.7
Solyc02g050210.2 Solanum lycopersicum HOM05D005064 ORTHO05D006611 4.9e-62 243.8 325 44.6
Medtr0191s0030 Medicago truncatula HOM05D005064 ORTHO05D006611 4.2e-61 240.7 820 28.4
CDE04G0109 Ceratophyllum demersum HOM05D005064 ORTHO05D006611 7.1e-61 240.0 799 29.4
SEGI_30642 Sequoiadendron giganteum HOM05D005064 ORTHO05D006611 1.9e-58 231.9 470 36.2
Haze_21131 Corylus avellana HOM05D005064 ORTHO05D006611 4.6e-52 210.7 804 29.6
Phvul.L001612 Phaseolus vulgaris HOM05D005064 ORTHO05D006611 6.0e-52 210.3 284 44.4
Haze_21134 Corylus avellana HOM05D005064 ORTHO05D006611 1.0e-51 209.5 804 29.5
Nitab4.5_0006212g0010 Nicotiana tabacum HOM05D005064 ORTHO05D006611 6.3e-49 200.3 285 43.2
Sc07g0001460 Simmondsia chinensis HOM05D005064 ORTHO05D006611 3.8e-46 191.0 833 27.1
Oeu026978.1 Olea europaea HOM05D005064 ORTHO05D006611 1.6e-44 185.7 690 29.1
Mapoly0045s0096 Marchantia polymorpha HOM05D005064 ORTHO05D006611 2.1e-44 185.3 468 32.9
TPR.G18982 Trifolium pratense HOM05D005064 ORTHO05D006611 3.3e-42 177.9 251 42.2
SEGI_19397 Sequoiadendron giganteum HOM05D005064 ORTHO05D006611 2.8e-41 174.9 332 36.1
Solyc02g050200.2 Solanum lycopersicum HOM05D005064 ORTHO05D006611 1.5e-39 169.1 729 27.6
AagrBONN_evm.TU.Sc2ySwM_362.1800 Anthoceros agrestis HOM05D005064 ORTHO05D006611 2.2e-38 165.2 484 30.6
Nitab4.5_0021252g0010 Nicotiana tabacum HOM05D005064 ORTHO05D006611 6.1e-36 157.1 525 32.0
Phvul.006G005800 Phaseolus vulgaris HOM05D005064 ORTHO05D006611 3.3e-26 124.8 649 26.7
CiPaw.09G214600 Carya illinoinensis HOM05D005064 ORTHO05D006611 5.5e-21 107.5 403 30.0
CSS0019886 Camellia sinensis var. sinensis HOM05D005064 ORTHO05D006611 2.2e-14 85.5 270 31.9
CBR_g19769 Chara braunii HOM05D005064 ORTHO05D006611 8.0e-12 77.0 287 25.8
SEGI_27109 Sequoiadendron giganteum HOM05D005064 ORTHO05D006611 2.4e-08 65.5 119 39.5
Sabra16G0120100 Salix brachista HOM05D005064 ORTHO05D050424 5.0e-06 57.8 54 46.3
Ah.11g042510 Amaranthus hybridus HOM05D005064 ORTHO05D006611 8.5e-06 57.0 196 29.1


User provided reference genes

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