Gene: Os01g0164800

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os01g0164800
  • Transcript Identifier Os01t0164800-01
  • Gene Type Coding gene
  • Location chr01 : 3345203-3354983 : negative

Gene Family Information

  • ID HOM05D005064
  • #Genes/#Species 148/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os01t0164800-01
  • MSU-ID LOC_Os01g07110.1
  • symbol OsBRCA2
  • name BREAST CANCER 2
  • uniprot Q0JQF9

Descriptions

  • Description Rice orthologue of human BRCA2, Double-strand break repair, Homologous recombination
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0000724
IBA
IEA
GOA Databasedouble-strand break repair via homologous recombination
GO:0000724
IEA
InterProdouble-strand break repair via homologous recombination
GO:0006355
IBA
GOA Databaseregulation of transcription, DNA-templated
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT4G00020
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT4G00020
GO:0048314
ISO
PLAZA Integrative Orthologyembryo sac morphogenesis AT4G00020
GO:0031347
ISO
PLAZA Integrative Orthologyregulation of defense response AT4G00020

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G00020

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G01630

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012340 Nucleic acid-binding, OB-fold
IPR002093 BRCA2 repeat
IPR015205 Tower domain
IPR015187 BRCA2, OB1
IPR015525 Breast cancer type 2 susceptibility protein
IPR036315 BRCA2 helical domain superfamily
IPR015252 Breast cancer type 2 susceptibility protein, helical domain
Mapman id Description
13.3.5.4.2 Cell cycle organisation.mitosis and meiosis.meiotic recombination.DNA strand exchange.DMC1-recruitment protein (BRCA2)
14.3.2.1 DNA damage response.homologous recombination repair (HR).BRCC DNA-damage response complex.component BRCA2