Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g923 Utricularia gibba HOM05D004256 ORTHO05D005224 0.0e+00 1265.0 638 100.0
Migut.H01323 Erythranthe guttata HOM05D004256 ORTHO05D005224 1.9e-169 600.1 909 42.5
SGA_v2.0_scaffold106G30680 Striga asiatica HOM05D004256 ORTHO05D005224 1.7e-168 597.0 922 40.8
SalBow7G4118 Salvia bowleyana HOM05D004256 ORTHO05D005224 1.3e-160 570.9 927 40.7
GSVIVG01021670001 Vitis vinifera HOM05D004256 ORTHO05D005224 9.1e-151 538.1 925 38.4
Dinv11058 Davidia involucrata HOM05D004256 ORTHO05D005224 7.2e-148 528.5 947 37.9
Cc09_g07800 Coffea canephora HOM05D004256 ORTHO05D005224 1.2e-147 527.7 942 38.2
COL.COLO4_26853 Corchorus olitorius HOM05D004256 ORTHO05D005224 6.1e-147 525.4 956 38.1
QL05p062735 Quercus lobata HOM05D004256 ORTHO05D005224 1.2e-145 521.2 958 37.5
TAR627G0580 Trochodendron aralioides HOM05D004256 ORTHO05D005224 2.0e-145 520.4 937 36.7
Aqoxy5G02462 Aquilegia oxysepala HOM05D004256 ORTHO05D005224 1.3e-144 517.7 935 37.6
Solyc02g070030.4 Solanum lycopersicum HOM05D004256 ORTHO05D005224 2.2e-144 516.9 937 37.1
PGR031G3593 Punica granatum HOM05D004256 ORTHO05D005224 4.8e-144 515.8 935 37.6
Sopen02g019190 Solanum pennellii HOM05D004256 ORTHO05D005224 1.4e-143 514.2 935 37.2
Nitab4.5_0001225g0210 Nicotiana tabacum HOM05D004256 ORTHO05D005224 1.8e-143 513.8 952 36.3
Thecc.06G004200 Theobroma cacao HOM05D004256 ORTHO05D005224 2.4e-143 513.5 950 36.9
Gorai.010G144100 Gossypium raimondii HOM05D004256 ORTHO05D005224 1.2e-142 511.1 921 37.4
Gohir.A06G119600 Gossypium hirsutum HOM05D004256 ORTHO05D005224 5.9e-142 508.8 950 37.1
Prupe.4G091400 Prunus persica HOM05D004256 ORTHO05D005224 1.7e-141 507.3 948 36.9
CAN.G79.16 Capsicum annuum HOM05D004256 ORTHO05D005224 6.5e-141 505.4 936 37.1
Sabra16G0315900 Salix brachista HOM05D004256 ORTHO05D005224 3.2e-140 503.1 940 37.6
MD05G1271600 Malus domestica HOM05D004256 ORTHO05D005224 4.2e-140 502.7 949 36.2
MD10G1252200 Malus domestica HOM05D004256 ORTHO05D005224 2.1e-139 500.4 949 36.5
Peaxi162Scf00670g00215 Petunia axillaris HOM05D004256 ORTHO05D005224 1.0e-138 498.0 957 36.6
Cfa004790 Carpinus fangiana HOM05D004256 ORTHO05D005224 1.4e-138 497.7 954 36.0
Potri.001G465500 Populus trichocarpa HOM05D004256 ORTHO05D005224 2.6e-137 493.4 941 37.1
CANSAT35G1931 Cannabis sativa HOM05D004256 ORTHO05D005224 4.4e-137 492.7 940 36.4
Manes.06G068000 Manihot esculenta HOM05D004256 ORTHO05D005224 2.2e-136 490.3 936 36.3
RcHm_v2.0_Chr5g0016471 Rosa chinensis HOM05D004256 ORTHO05D005224 2.2e-136 490.3 966 35.7
Duzib192G0446 Durio zibethinus HOM05D004256 ORTHO05D005224 3.7e-136 489.6 952 36.2
Ciclev10014179m.g Citrus clementina HOM05D004256 ORTHO05D005224 4.8e-136 489.2 928 37.1
TWI38G1119 Tripterygium wilfordii HOM05D004256 ORTHO05D005224 1.1e-135 488.0 934 36.4
Lalb_Chr13g0291451 Lupinus albus HOM05D004256 ORTHO05D005224 3.1e-135 486.5 899 36.9
HanXRQChr04g0117221 Helianthus annuus HOM05D004256 ORTHO05D005224 1.2e-134 484.6 890 36.7
CiPaw.09G142400 Carya illinoinensis HOM05D004256 ORTHO05D005224 5.9e-134 482.3 965 34.7
FvH4_3g10230 Fragaria vesca HOM05D004256 ORTHO05D005224 7.7e-134 481.9 970 34.8
CsaV3_1G037200 Cucumis sativus L. HOM05D004256 ORTHO05D005224 1.0e-133 481.5 940 35.7
Lsat_1_v5_gn_7_34341 Lactuca sativa HOM05D004256 ORTHO05D005224 5.0e-133 479.2 858 38.2
FAN21G3884 Fragaria x ananassa HOM05D004256 ORTHO05D005224 1.5e-132 477.6 969 34.7
Rhsim02G0162800 Rhododendron simsii HOM05D004256 ORTHO05D005224 1.5e-132 477.6 953 35.3
Atru.chr10.795 Acer truncatum HOM05D004256 ORTHO05D005224 3.3e-132 476.5 924 37.0
ClCG03G008210 Citrullus lanatus HOM05D004256 ORTHO05D005224 7.2e-132 475.3 938 35.1
MELO3C002826.2 Cucumis melo HOM05D004256 ORTHO05D005224 2.1e-131 473.8 939 35.3
ECA236G4703 Erigeron canadensis HOM05D004256 ORTHO05D005224 3.6e-131 473.0 902 35.7
TWI63G0578 Tripterygium wilfordii HOM05D004256 ORTHO05D005224 6.1e-131 472.2 938 36.5
Eucgr.K01946 Eucalyptus grandis HOM05D004256 ORTHO05D005224 1.0e-130 471.5 910 36.9
Nitab4.5_0001583g0180 Nicotiana tabacum HOM05D004256 ORTHO05D005224 3.0e-130 469.9 944 34.5
THA.LOC104812246 Tarenaya hassleriana HOM05D004256 ORTHO05D005224 3.0e-130 469.9 931 36.0
arahy.Tifrunner.gnm1.ann1.71MGM7 Arachis hypogaea HOM05D004256 ORTHO05D005224 4.4e-129 466.1 933 35.3
MBI02_g25367_MAGBIO Magnolia biondii HOM05D004256 ORTHO05D005224 7.5e-129 465.3 947 34.8
PSO675G2772 Papaver somniferum HOM05D004256 ORTHO05D005224 1.7e-128 464.2 933 34.8
Oeu021898.3 Olea europaea HOM05D004256 ORTHO05D005224 2.2e-128 463.8 834 39.4
arahy.Tifrunner.gnm1.ann1.NJCF43 Arachis hypogaea HOM05D004256 ORTHO05D005224 4.9e-128 462.6 935 35.2
FAN16G0878 Fragaria x ananassa HOM05D004256 ORTHO05D005224 1.4e-127 461.1 987 34.2
Lalb_Chr12g0208801 Lupinus albus HOM05D004256 ORTHO05D005224 9.2e-127 458.4 911 35.6
Glyma.05G126600 Glycine max HOM05D004256 ORTHO05D005224 5.9e-126 455.7 941 34.5
DCAR_003847 Daucus carota HOM05D004256 ORTHO05D005224 7.8e-126 455.3 952 34.1
FAN11G3535 Fragaria x ananassa HOM05D004256 ORTHO05D005224 3.8e-125 453.0 1017 33.1
TPR.G30378 Trifolium pratense HOM05D004256 ORTHO05D005224 1.5e-124 451.1 940 35.4
Lj4g0013937 Lotus japonicus HOM05D004256 ORTHO05D005224 4.3e-124 449.5 934 34.5
Ca_18290_v3 Cicer arietinum L. HOM05D004256 ORTHO05D005224 5.6e-124 449.1 948 34.7
Glyma.08G081600 Glycine max HOM05D004256 ORTHO05D005224 9.5e-124 448.4 942 34.2
Oeu014331.2 Olea europaea HOM05D004256 ORTHO05D005224 2.1e-123 447.2 725 41.4
Phvul.002G198200 Phaseolus vulgaris HOM05D004256 ORTHO05D005224 8.0e-123 445.3 936 33.4
Os07g0164000 Oryza sativa ssp. japonica HOM05D004256 ORTHO05D005224 1.0e-122 444.9 910 34.6
EL10Ac8g19544 Beta vulgaris HOM05D004256 ORTHO05D005224 1.3e-120 438.0 925 33.8
Ah.14g086130 Amaranthus hybridus HOM05D004256 ORTHO05D005224 8.3e-120 435.3 947 34.0
Medtr4g094545 Medicago truncatula HOM05D004256 ORTHO05D005224 5.4e-119 432.6 943 33.8
Aa31LG6G2980 Aethionema arabicum HOM05D004256 ORTHO05D005224 7.0e-119 432.2 937 34.5
Nn2g15522 Nelumbo nucifera HOM05D004256 ORTHO05D005224 3.0e-117 426.8 953 33.2
CSS0036381 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 4.3e-116 422.9 347 65.1
CSS0039858 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 1.2e-115 421.4 347 64.8
HPP92_009410 Vanilla planifolia HOM05D004256 ORTHO05D005224 8.0e-115 418.7 944 33.2
Lj1A1161T63 Lonicera japonica HOM05D004256 ORTHO05D005224 2.0e-113 414.1 909 34.0
AL7G33240 Arabidopsis lyrata HOM05D004256 ORTHO05D005224 2.6e-113 413.7 954 34.1
Psat7g093560 Pisum sativum HOM05D004256 ORTHO05D005224 2.4e-111 407.1 983 32.0
Sp7g19000 Schrenkiella parvula HOM05D004256 ORTHO05D005224 3.2e-111 406.8 950 32.6
Carub.0007s2052 Capsella rubella HOM05D004256 ORTHO05D005224 2.7e-110 403.7 959 34.0
AT4G20910 Arabidopsis thaliana HOM05D004256 ORTHO05D005224 2.3e-109 400.6 953 33.7
Thhalv10024326m.g Eutrema salsugineum HOM05D004256 ORTHO05D005224 2.3e-109 400.6 967 32.7
Zm00001eb300700 Zea mays HOM05D004256 ORTHO05D005224 2.1e-107 394.0 930 33.1
BolC1t01426H Brassica oleracea HOM05D004256 ORTHO05D005224 1.7e-104 384.4 932 32.3
CARHR227470 Cardamine hirsuta HOM05D004256 ORTHO05D005224 1.7e-104 384.4 948 32.2
Carub.0007s2051 Capsella rubella HOM05D004256 ORTHO05D005224 4.3e-100 369.8 924 32.5
Dinv16826 Davidia involucrata HOM05D004256 ORTHO05D005224 5.6e-100 369.4 709 37.4
BraA01t01176Z Brassica rapa HOM05D004256 ORTHO05D005224 2.8e-99 367.1 955 31.8
VMungo0251G1323 Vigna mungo HOM05D004256 ORTHO05D005224 2.2e-96 357.5 348 55.7
Thhalv10024347m.g Eutrema salsugineum HOM05D004256 ORTHO05D005224 1.4e-95 354.8 941 31.8
Cpa.g.sc166.41 Carica papaya HOM05D004256 ORTHO05D007693 9.2e-95 352.1 376 52.9
AL7G33230 Arabidopsis lyrata HOM05D004256 ORTHO05D005224 4.6e-94 349.7 934 30.7
BolC1t01428H Brassica oleracea HOM05D004256 ORTHO05D005224 1.0e-93 348.6 962 31.1
Gohir.D06G123900 Gossypium hirsutum HOM05D004256 ORTHO05D005224 2.1e-91 340.9 789 32.3
BcaB03g11710 Brassica carinata HOM05D004256 ORTHO05D005224 9.9e-89 332.0 382 51.3
BraA01t01178Z Brassica rapa HOM05D004256 ORTHO05D005224 9.9e-89 332.0 417 48.4
C01p14740 Brassica napus HOM05D004256 ORTHO05D005224 1.7e-85 321.2 337 52.8
A01p12320 Brassica napus HOM05D004256 ORTHO05D005224 2.5e-84 317.4 341 52.8
BcaC09g51291 Brassica carinata HOM05D004256 ORTHO05D005224 4.8e-83 313.2 419 47.3
C01p14750 Brassica napus HOM05D004256 ORTHO05D005224 4.8e-83 313.2 419 47.3
Potri.011G163600 Populus trichocarpa HOM05D004256 ORTHO05D005224 1.4e-82 311.6 783 32.6
Actinidia31383 Actinidia chinensis HOM05D004256 ORTHO05D005224 2.2e-80 304.3 262 59.9
Sc17g0004580 Simmondsia chinensis HOM05D004256 ORTHO05D005224 1.2e-78 298.5 259 62.2
ATR1098G117 Amborella trichopoda HOM05D004256 ORTHO05D005224 8.7e-77 292.4 397 44.1
FAN18G3233 Fragaria x ananassa HOM05D004256 ORTHO05D005224 3.2e-71 273.9 804 29.6
CDE02G0763 Ceratophyllum demersum HOM05D004256 ORTHO05D005224 3.7e-67 260.4 387 41.9
Zm00001eb161380 Zea mays HOM05D004256 ORTHO05D005224 1.0e-64 252.3 369 43.1
Hma1.2p1_2369F.1_g320760 Hydrangea macrophylla HOM05D004256 ORTHO05D005224 2.9e-64 250.8 244 57.0
AagrBONN_evm.TU.Sc2ySwM_117.1656 Anthoceros agrestis HOM05D004256 ORTHO05D005224 3.8e-64 250.4 343 44.0
SMO165G0118 Selaginella moellendorffii HOM05D004256 ORTHO05D005224 3.8e-64 250.4 368 41.0
Mapoly0004s0071 Marchantia polymorpha HOM05D004256 ORTHO05D005224 3.9e-61 240.4 376 41.0
Eucgr.L00874 Eucalyptus grandis HOM05D004256 ORTHO05D005224 1.5e-60 238.4 222 59.0
FAN08G3148 Fragaria x ananassa HOM05D004256 ORTHO05D005224 2.6e-57 227.6 234 54.7
Sed0001829 Sechium edule HOM05D004256 ORTHO05D005224 1.4e-55 221.9 711 27.7
CARHR227480 Cardamine hirsuta HOM05D004256 ORTHO05D005224 9.4e-55 219.2 752 27.8
Pp3c1_60 Physcomitrium patens HOM05D004256 ORTHO05D005224 6.1e-54 216.5 359 38.4
FAN13G2402 Fragaria x ananassa HOM05D004256 ORTHO05D005224 2.9e-48 197.6 724 26.5
Dinv16824 Davidia involucrata HOM05D010983 ORTHO05D005224 7.2e-47 193.0 138 68.8
Actinidia31384 Actinidia chinensis HOM05D004256 ORTHO05D005224 1.3e-43 182.2 363 34.2
FAN18G2742 Fragaria x ananassa HOM05D004256 ORTHO05D005224 4.8e-43 180.3 831 25.6
BcaC09g51294 Brassica carinata HOM05D004256 ORTHO05D005224 2.2e-40 171.4 137 60.6
AT4G20920 Arabidopsis thaliana HOM05D004256 ORTHO05D005224 3.8e-40 170.6 751 25.6
CSS0013637 Camellia sinensis var. sinensis HOM05D004256 ORTHO05D005224 3.0e-37 161.0 359 32.3
Sc17g0004590 Simmondsia chinensis HOM05D004256 ORTHO05D005224 1.1e-36 159.1 351 31.9
SEGI_28315 Sequoiadendron giganteum HOM05D004256 ORTHO05D005224 5.7e-36 156.8 188 46.3
FAN04G0519 Fragaria x ananassa HOM05D004256 ORTHO05D005224 2.8e-35 154.5 364 32.1
CBR_g29910 Chara braunii HOM05D000019 ORTHO05D005224 1.1e-34 152.5 369 30.9
Haze_10386 Corylus avellana HOM05D004256 ORTHO05D005224 1.3e-32 145.6 357 30.8
Haze_10384 Corylus avellana HOM05D004256 ORTHO05D005224 1.5e-31 142.1 458 28.6
AUR62034030 Chenopodium quinoa HOM05D004256 ORTHO05D005224 5.5e-31 140.2 361 31.9
AUR62043099 Chenopodium quinoa HOM05D004256 ORTHO05D005224 2.7e-30 137.9 354 31.6
FAN25G0985 Fragaria x ananassa HOM05D004256 ORTHO05D005224 4.4e-28 130.6 172 41.9
CAN.G79.20 Capsicum annuum HOM05D004256 ORTHO05D005224 1.6e-25 122.1 115 57.4
Ca_18291_v3 Cicer arietinum L. HOM05D004256 ORTHO05D005224 2.0e-25 121.7 99 60.6
BraA01t01177Z Brassica rapa HOM05D004256 ORTHO05D005224 1.1e-23 115.9 353 28.9
CDE02G4682 Ceratophyllum demersum HOM05D004256 ORTHO05D005224 3.2e-23 114.4 156 37.8
BcaC09g51292 Brassica carinata HOM05D004256 ORTHO05D005224 9.4e-23 112.8 351 27.6
Actinidia33023 Actinidia chinensis HOM05D004256 ORTHO05D005224 2.1e-22 111.7 256 35.9
Zm00001eb318280 Zea mays HOM05D004256 ORTHO05D005224 3.6e-22 110.9 157 44.6
FvH4_5g29180 Fragaria vesca HOM05D004256 ORTHO05D005224 6.1e-22 110.2 92 59.8
FAN08G1809 Fragaria x ananassa HOM05D004256 ORTHO05D005224 8.0e-22 109.8 346 27.7
BcaC01g00730 Brassica carinata HOM05D004256 ORTHO05D005224 1.0e-21 109.4 163 38.0
BolC1t01427H Brassica oleracea HOM05D004256 ORTHO05D005224 1.4e-21 109.0 349 26.6
Haze_10382 Corylus avellana HOM05D004256 ORTHO05D005224 5.2e-21 107.1 161 40.4
VMungo0251G1407 Vigna mungo HOM05D004256 ORTHO05D005224 5.2e-21 107.1 85 58.8
BcaNung04718 Brassica carinata HOM05D004256 ORTHO05D005224 6.8e-21 106.7 337 26.4
Sp7g19005 Schrenkiella parvula HOM05D004256 ORTHO05D005224 7.5e-20 103.2 136 46.3
BcaC09g51293 Brassica carinata HOM05D004256 ORTHO05D005224 1.4e-13 82.4 160 34.4
Cre03.g191200 Chlamydomonas reinhardtii HOM05D004256 ORTHO05D005224 1.4e-13 82.4 288 24.7
HanXRQChr04g0117231 Helianthus annuus HOM05D004256 ORTHO05D005224 1.7e-11 75.5 94 46.8
Zm00001eb318270 Zea mays HOM05D004256 ORTHO05D005224 2.8e-11 74.7 86 47.7
BcaC08g44368 Brassica carinata HOM05D004256 ORTHO05D005224 5.4e-10 70.5 94 40.4
BcaC06g34131 Brassica carinata HOM05D004256 ORTHO05D005224 3.5e-09 67.8 100 34.0
BcaC04g20971 Brassica carinata HOM05D004256 ORTHO05D005224 1.3e-08 65.9 128 32.0
SEGI_09964 Sequoiadendron giganteum HOM05D000070 ORTHO05D005224 8.6e-08 63.2 56 53.6
BcaC02g08729 Brassica carinata HOM05D004256 ORTHO05D021760 6.1e-06 57.0 78 35.9


User provided reference genes

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