Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2550 Utricularia gibba HOM05D001273 ORTHO05D023773 3.9e-120 434.9 230 100.0
Gohir.D06G064400 Gossypium hirsutum HOM05D001273 ORTHO05D000023 6.4e-22 108.6 186 36.0
Thecc.09G103900 Theobroma cacao HOM05D001273 ORTHO05D000023 6.4e-22 108.6 212 32.5
Gorai.010G075200 Gossypium raimondii HOM05D001273 ORTHO05D000023 1.1e-21 107.8 186 36.0
Oeu053754.1 Olea europaea HOM05D001273 ORTHO05D000023 7.1e-21 105.1 252 34.1
Gohir.A06G065800 Gossypium hirsutum HOM05D001273 ORTHO05D000023 2.1e-20 103.6 159 38.4
SalBow8G2593 Salvia bowleyana HOM05D001273 ORTHO05D000023 2.7e-20 103.2 132 43.9
Dinv41652 Davidia involucrata HOM05D001273 ORTHO05D000023 2.5e-18 96.7 157 38.9
Duzib168G1568 Durio zibethinus HOM05D001273 ORTHO05D000023 3.3e-18 96.3 212 32.1
Sabra06G0125500 Salix brachista HOM05D001273 ORTHO05D000023 1.6e-17 94.0 225 31.6
TAR624G0236 Trochodendron aralioides HOM05D001273 ORTHO05D000023 1.6e-17 94.0 130 38.5
Migut.K00519 Erythranthe guttata HOM05D001273 ORTHO05D000023 2.1e-17 93.6 129 41.9
CAN.G1812.8 Capsicum annuum HOM05D001273 ORTHO05D000023 2.8e-17 93.2 125 41.6
Cc06_g10200 Coffea canephora HOM05D001273 ORTHO05D000023 2.8e-17 93.2 125 42.4
Potri.006G163100 Populus trichocarpa HOM05D001273 ORTHO05D000023 2.8e-17 93.2 230 32.2
COL.COLO4_34785 Corchorus olitorius HOM05D001273 ORTHO05D000023 1.1e-16 91.3 196 31.1
EL10Ac8g18963 Beta vulgaris HOM05D001273 ORTHO05D000023 2.4e-16 90.1 134 37.3
Peaxi162Scf00539g00006 Petunia axillaris HOM05D001273 ORTHO05D000023 4.0e-16 89.4 125 40.0
PGSC0003DMG400027434 Solanum tuberosum HOM05D001273 ORTHO05D000023 9.0e-16 88.2 130 38.5
PGR142G4117 Punica granatum HOM05D001273 ORTHO05D000023 1.2e-15 87.8 183 36.6
CSS0020653 Camellia sinensis var. sinensis HOM05D001273 ORTHO05D000023 2.6e-15 86.7 122 41.8
CANSAT56G4419 Cannabis sativa HOM05D001273 ORTHO05D000023 2.6e-15 86.7 251 32.7
Eucgr.F01559 Eucalyptus grandis HOM05D001273 ORTHO05D000023 2.6e-15 86.7 237 31.2
CSS0003269 Camellia sinensis var. sinensis HOM05D001273 ORTHO05D000023 3.4e-15 86.3 229 33.6
Cfa003211 Carpinus fangiana HOM05D001273 ORTHO05D000023 3.4e-15 86.3 131 39.7
QL02p042453 Quercus lobata HOM05D001273 ORTHO05D000023 3.4e-15 86.3 133 40.6
Solyc05g018240.4 Solanum lycopersicum HOM05D001273 ORTHO05D000023 3.4e-15 86.3 130 37.7
SGA_v2.0_scaffold19G08759 Striga asiatica HOM05D001273 ORTHO05D000023 5.8e-15 85.5 130 39.2
arahy.Tifrunner.gnm1.ann1.KPXK74 Arachis hypogaea HOM05D001273 ORTHO05D000023 9.9e-15 84.7 190 34.7
TWI63G0391 Tripterygium wilfordii HOM05D001273 ORTHO05D000023 9.9e-15 84.7 232 30.6
MBI04_g27066_MAGBIO Magnolia biondii HOM05D001273 ORTHO05D000023 1.7e-14 84.0 180 35.0
arahy.Tifrunner.gnm1.ann1.E4JC76 Arachis hypogaea HOM05D001273 ORTHO05D000023 2.9e-14 83.2 188 34.0
MD15G1193500 Malus domestica HOM05D001273 ORTHO05D000023 2.9e-14 83.2 138 42.0
QL11p047070 Quercus lobata HOM05D001273 ORTHO05D023773 2.9e-14 83.2 131 41.2
Actinidia20411 Actinidia chinensis HOM05D001273 ORTHO05D000023 3.8e-14 82.8 137 35.8
arahy.Tifrunner.gnm1.ann1.T8DWUL Arachis hypogaea HOM05D001273 ORTHO05D000023 3.8e-14 82.8 188 34.0
vmacro10866 Vaccinium macrocarpon HOM05D001273 ORTHO05D000023 3.8e-14 82.8 131 38.9
Hma1.2p1_0945F.1_g240220 Hydrangea macrophylla HOM05D001273 ORTHO05D000023 4.9e-14 82.4 196 32.7
Haze_25797 Corylus avellana HOM05D001273 ORTHO05D000023 6.4e-14 82.0 131 37.4
Sed0022257 Sechium edule HOM05D001273 ORTHO05D000023 6.4e-14 82.0 167 36.5
HPP92_024166 Vanilla planifolia HOM05D001273 ORTHO05D000023 8.4e-14 81.6 154 35.7
ClCG11G002280 Citrullus lanatus HOM05D001273 ORTHO05D000023 1.9e-13 80.5 233 30.0
CsaV3_2G002040 Cucumis sativus L. HOM05D001273 ORTHO05D000023 1.9e-13 80.5 231 31.2
Cpa.g.sc40.34 Carica papaya HOM05D001273 ORTHO05D000023 3.2e-13 79.7 176 33.0
MELO3C004577.2 Cucumis melo HOM05D001273 ORTHO05D000023 3.2e-13 79.7 219 30.1
MD02G1059500 Malus domestica HOM05D001273 ORTHO05D000023 4.2e-13 79.3 139 43.9
Manes.16G111400 Manihot esculenta HOM05D001273 ORTHO05D000023 4.2e-13 79.3 225 29.3
Sc08g0007820 Simmondsia chinensis HOM05D001273 ORTHO05D000023 7.1e-13 78.6 132 37.9
VMungo0251G1268 Vigna mungo HOM05D001273 ORTHO05D000023 9.3e-13 78.2 125 43.2
arahy.Tifrunner.gnm1.ann1.60E57G Arachis hypogaea HOM05D001273 ORTHO05D023773 1.2e-12 77.8 187 33.2
THA.LOC104804012 Tarenaya hassleriana HOM05D001273 ORTHO05D000023 1.2e-12 77.8 237 30.0
Lalb_Chr09g0331391 Lupinus albus HOM05D001273 ORTHO05D000023 1.6e-12 77.4 207 31.4
Phvul.002G310400 Phaseolus vulgaris HOM05D001273 ORTHO05D000023 1.6e-12 77.4 125 39.2
Eucgr.F00668 Eucalyptus grandis HOM05D001273 ORTHO05D000023 2.1e-12 77.0 237 27.8
AT2G20020 Arabidopsis thaliana HOM05D001273 ORTHO05D000023 3.5e-12 76.3 176 31.2
Prupe.7G223600 Prunus persica HOM05D001273 ORTHO05D000023 3.5e-12 76.3 135 37.8
RcHm_v2.0_Chr2g0091431 Rosa chinensis HOM05D001273 ORTHO05D000023 3.5e-12 76.3 173 34.7
Rhsim05G0042000 Rhododendron simsii HOM05D001273 ORTHO05D000023 4.6e-12 75.9 146 37.7
Sopen05g015000 Solanum pennellii HOM05D001273 ORTHO05D000023 6.0e-12 75.5 139 36.7
GSVIVG01015331001 Vitis vinifera HOM05D001273 ORTHO05D000023 6.0e-12 75.5 180 32.2
CiPaw.03G227000 Carya illinoinensis HOM05D001273 ORTHO05D000023 1.3e-11 74.3 127 36.2
Carub.0003s3429 Capsella rubella HOM05D001273 ORTHO05D000023 2.3e-11 73.6 246 28.9
Dinv36704 Davidia involucrata HOM05D001273 ORTHO05D023773 2.3e-11 73.6 109 43.1
HanXRQChr09g0238911 Helianthus annuus HOM05D001273 ORTHO05D000023 2.3e-11 73.6 147 32.0
CARHR110500 Cardamine hirsuta HOM05D001273 ORTHO05D000023 3.0e-11 73.2 174 30.5
Hund09234 Selenicereus undatus HOM05D001273 ORTHO05D000023 3.0e-11 73.2 217 30.0
Aqoxy7G03909 Aquilegia oxysepala HOM05D001273 ORTHO05D000023 1.1e-10 71.2 173 29.5
AL3G48070 Arabidopsis lyrata HOM05D001273 ORTHO05D000023 1.1e-10 71.2 187 29.9
BcaC06g36677 Brassica carinata HOM05D001273 ORTHO05D000023 1.1e-10 71.2 245 27.3
C07p01140 Brassica napus HOM05D001273 ORTHO05D000023 1.1e-10 71.2 245 26.5
BolC7t40559H Brassica oleracea HOM05D001273 ORTHO05D000023 1.1e-10 71.2 245 27.3
ECA240G3615 Erigeron canadensis HOM05D001273 ORTHO05D000023 1.9e-10 70.5 177 28.2
arahy.Tifrunner.gnm1.ann1.1EV8X8 Arachis hypogaea HOM05D001273 ORTHO05D000023 2.5e-10 70.1 127 37.0
DCAR_024698 Daucus carota HOM05D001273 ORTHO05D000023 2.5e-10 70.1 132 33.3
Glyma.08G035200 Glycine max HOM05D001273 ORTHO05D000023 2.5e-10 70.1 161 34.2
Psat7g015680 Pisum sativum HOM05D001273 ORTHO05D000023 3.3e-10 69.7 128 39.1
arahy.Tifrunner.gnm1.ann1.CYHU50 Arachis hypogaea HOM05D001273 ORTHO05D000023 4.3e-10 69.3 125 35.2
Medtr8g102850 Medicago truncatula HOM05D001273 ORTHO05D000023 4.3e-10 69.3 123 35.0
Thhalv10001924m.g Eutrema salsugineum HOM05D001273 ORTHO05D000023 5.6e-10 68.9 232 25.9
FvH4_1g05780 Fragaria vesca HOM05D001273 ORTHO05D000023 5.6e-10 68.9 136 38.2
FAN19G2994 Fragaria x ananassa HOM05D001273 ORTHO05D000023 5.6e-10 68.9 136 38.2
A07p00620 Brassica napus HOM05D001273 ORTHO05D000023 7.4e-10 68.6 245 26.9
TPR.G23497 Trifolium pratense HOM05D001273 ORTHO05D000023 7.4e-10 68.6 193 31.1
FAN28G1921 Fragaria x ananassa HOM05D001273 ORTHO05D000023 2.1e-09 67.0 179 31.8
BcaB03g16793 Brassica carinata HOM05D001273 ORTHO05D000023 2.8e-09 66.6 234 25.6
Nitab4.5_0000066g0210 Nicotiana tabacum HOM05D001273 ORTHO05D000023 2.8e-09 66.6 232 28.0
PSO210G6932 Papaver somniferum HOM05D001273 ORTHO05D000023 2.8e-09 66.6 224 27.7
Glyma.05G228300 Glycine max HOM05D001273 ORTHO05D023773 3.7e-09 66.2 164 32.9
BraA07t27858Z Brassica rapa HOM05D001273 ORTHO05D000023 4.8e-09 65.9 241 25.3
Atru.chr7.1426 Acer truncatum HOM05D001273 ORTHO05D000023 6.2e-09 65.5 173 34.1
PSO210G5770 Papaver somniferum HOM05D001273 ORTHO05D000023 1.1e-08 64.7 223 28.3
Aa31LG8G16960 Aethionema arabicum HOM05D001273 ORTHO05D000023 1.4e-08 64.3 126 31.7
Nitab4.5_0000012g0190 Nicotiana tabacum HOM05D001273 ORTHO05D000023 1.8e-08 63.9 238 27.3
Lsat_1_v5_gn_7_41120 Lactuca sativa HOM05D001273 ORTHO05D000023 4.0e-08 62.8 167 28.7
Sp3g33340 Schrenkiella parvula HOM05D001273 ORTHO05D000023 6.9e-08 62.0 232 24.1
Glyma.01G147400 Glycine max HOM05D001273 ORTHO05D000023 2.6e-07 60.1 132 31.1
Ciclev10010654m.g Citrus clementina HOM05D001273 ORTHO05D000023 4.5e-07 59.3 159 26.4
Ah.09g228900 Amaranthus hybridus HOM05D001273 ORTHO05D000023 2.2e-06 57.0 239 25.9
Os01g0495900 Oryza sativa ssp. japonica HOM05D001273 ORTHO05D000023 2.9e-06 56.6 217 29.0
ATR0705G141 Amborella trichopoda HOM05D001273 ORTHO05D000023 4.9e-06 55.8 153 28.8
Lalb_Chr14g0371751 Lupinus albus HOM05D001273 ORTHO05D000023 8.4e-06 55.1 129 31.8
SEGI_33533 Sequoiadendron giganteum HOM05D001273 ORTHO05D024654 8.4e-06 55.1 122 35.2


User provided reference genes

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