Gene: Os01g0495900

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os01g0495900
  • Transcript Identifier Os01t0495900-01
  • Gene Type Coding gene
  • Location chr01 : 17012690-17016129 : positive

Gene Family Information

  • ID HOM05D001273
  • #Genes/#Species 492/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os01t0495900-01
  • MSU-ID LOC_Os01g31110.1
  • symbol OsCAF1
  • name CRS2-associated factor 1
  • uniprot Q5VMQ5

Descriptions

  • Description Chloroplast RNA splicing and ribosome maturation (CRM) domain containing protein, Splicing of group IIA and group IIB introns, Regulation of chloroplast development
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0008380
IEA
GOA DatabaseRNA splicing
GO:0000373
IEA
GOA DatabaseGroup II intron splicing
GO:0000373
IEA
InterProGroup II intron splicing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0003729
IEA
GOA DatabasemRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Zm00001eb306430

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
IEA
GOA Databasechloroplast stroma
GO:0009536
IEA
GOA Databaseplastid
GO:0009507
IEA
GOA Databasechloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001890 RNA-binding, CRM domain
IPR035920 YhbY-like superfamily
IPR044599 CRS2-associated factor, plant
Mapman id Description
16.11.4.1.1.9.2 RNA processing.organelle machinery.pre-mRNA splicing.plastidial RNA splicing.group-II intron splicing.CRS2-CAF splicing factor complexes.component CAF