Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1128 Utricularia gibba HOM05D004774 ORTHO05D005514 4.1e-150 534.6 261 100.0
MSTRG.18290 Avicennia marina HOM05D004774 ORTHO05D005514 2.4e-73 279.6 261 55.2
Migut.D00377 Erythranthe guttata HOM05D004774 ORTHO05D005514 2.2e-63 246.5 259 50.6
GSVIVG01000730001 Vitis vinifera HOM05D004774 ORTHO05D005514 1.0e-60 237.7 259 48.3
GSVIVG01011075001 Vitis vinifera HOM05D004774 ORTHO05D005514 4.0e-60 235.7 259 47.5
Cc01_g18810 Coffea canephora HOM05D004774 ORTHO05D005514 1.5e-59 233.8 261 46.7
Dinv40162 Davidia involucrata HOM05D004774 ORTHO05D005514 3.3e-59 232.6 261 46.0
CAN.G1190.29 Capsicum annuum HOM05D004774 ORTHO05D005514 4.4e-59 232.3 261 47.1
CSS0049587 Camellia sinensis var. sinensis HOM05D004774 ORTHO05D005514 3.7e-58 229.2 265 46.0
Nitab4.5_0003289g0060 Nicotiana tabacum HOM05D004774 ORTHO05D005514 8.2e-58 228.0 261 44.1
SGA_v2.0_scaffold138G35272 Striga asiatica HOM05D004774 ORTHO05D005514 1.4e-57 227.3 281 45.6
Dinv22475 Davidia involucrata HOM05D004774 ORTHO05D005514 1.2e-56 224.2 261 45.2
TAR636G0805 Trochodendron aralioides HOM05D004774 ORTHO05D005514 1.2e-56 224.2 255 45.9
Sopen07g002340 Solanum pennellii HOM05D004774 ORTHO05D005514 3.5e-56 222.6 261 45.2
Nn4g23666 Nelumbo nucifera HOM05D004774 ORTHO05D005514 7.7e-56 221.5 261 45.2
Potri.002G044500 Populus trichocarpa HOM05D004774 ORTHO05D005514 2.9e-55 219.5 259 44.0
CANSAT35G0005 Cannabis sativa HOM05D004774 ORTHO05D005514 5.0e-55 218.8 259 44.4
TWI12G1255 Tripterygium wilfordii HOM05D004774 ORTHO05D005514 1.9e-54 216.9 259 44.0
Solyc07g006240.4 Solanum lycopersicum HOM05D004774 ORTHO05D005514 4.2e-54 215.7 267 44.2
QL08p045287 Quercus lobata HOM05D004774 ORTHO05D005514 7.2e-54 214.9 260 42.7
THA.LOC104815831 Tarenaya hassleriana HOM05D004774 ORTHO05D005514 9.4e-54 214.5 259 43.2
TWI18G0081 Tripterygium wilfordii HOM05D004774 ORTHO05D005514 9.4e-54 214.5 259 44.0
vmacro02628 Vaccinium macrocarpon HOM05D004774 ORTHO05D005514 9.4e-54 214.5 268 44.8
Thhalv10028967m.g Eutrema salsugineum HOM05D004774 ORTHO05D005514 2.7e-53 213.0 260 43.5
CiPaw.06G137100 Carya illinoinensis HOM05D004774 ORTHO05D005514 3.6e-53 212.6 260 42.7
EL10Ac3g05825 Beta vulgaris HOM05D004774 ORTHO05D005514 4.7e-53 212.2 261 43.7
Atru.chr5.1584 Acer truncatum HOM05D004774 ORTHO05D005514 1.4e-52 210.7 259 42.9
AUR62002186 Chenopodium quinoa HOM05D004774 ORTHO05D005514 2.3e-52 209.9 263 43.7
Manes.01G201400 Manihot esculenta HOM05D004774 ORTHO05D005514 2.3e-52 209.9 269 42.8
Nitab4.5_0001427g0080 Nicotiana tabacum HOM05D004774 ORTHO05D005514 1.2e-51 207.6 196 50.5
Duzib138G0586 Durio zibethinus HOM05D004774 ORTHO05D005514 2.6e-51 206.5 266 42.1
BraA09t42016Z Brassica rapa HOM05D004774 ORTHO05D005514 3.4e-51 206.1 264 41.7
Thecc.01G266900 Theobroma cacao HOM05D004774 ORTHO05D005514 3.4e-51 206.1 266 41.4
AL1G16800 Arabidopsis lyrata HOM05D004774 ORTHO05D005514 5.7e-51 205.3 260 42.7
MD08G1227600 Malus domestica HOM05D004774 ORTHO05D005514 7.5e-51 204.9 259 40.9
ClCG09G004860 Citrullus lanatus HOM05D004774 ORTHO05D005514 9.8e-51 204.5 261 41.4
Lsat_1_v5_gn_5_176641 Lactuca sativa HOM05D004774 ORTHO05D005514 1.3e-50 204.1 262 43.1
Lalb_Chr17g0348441 Lupinus albus HOM05D004774 ORTHO05D005514 1.7e-50 203.8 269 45.0
Cpa.g.sc52.135 Carica papaya HOM05D004774 ORTHO05D005514 2.2e-50 203.4 259 42.1
Carub.0001s0611 Capsella rubella HOM05D004774 ORTHO05D005514 3.7e-50 202.6 259 40.5
Aqoxy4G03157 Aquilegia oxysepala HOM05D004774 ORTHO05D005514 8.3e-50 201.4 261 41.8
CARHR006490 Cardamine hirsuta HOM05D004774 ORTHO05D005514 8.3e-50 201.4 259 42.1
COL.COLO4_05101 Corchorus olitorius HOM05D004774 ORTHO05D005514 8.3e-50 201.4 269 41.3
Aqoxy7G03988 Aquilegia oxysepala HOM05D004774 ORTHO05D005514 1.1e-49 201.1 261 41.4
Aa31LG1G7840 Aethionema arabicum HOM05D004480 ORTHO05D005546 1.8e-49 200.3 260 41.5
Aqoxy1G01668 Aquilegia oxysepala HOM05D004774 ORTHO05D005514 2.4e-49 199.9 261 41.4
A08p35880 Brassica napus HOM05D004774 ORTHO05D005514 2.4e-49 199.9 259 40.2
C08p02690 Brassica napus HOM05D004774 ORTHO05D005514 2.4e-49 199.9 259 40.2
BolC8t47065H Brassica oleracea HOM05D004774 ORTHO05D005514 2.4e-49 199.9 259 40.2
BraA08t35495Z Brassica rapa HOM05D004774 ORTHO05D005514 2.4e-49 199.9 259 40.2
Gohir.A07G209300 Gossypium hirsutum HOM05D004774 ORTHO05D005514 3.1e-49 199.5 266 39.8
Rhsim13G0031100 Rhododendron simsii HOM05D004774 ORTHO05D005514 4.1e-49 199.1 267 42.3
Gorai.001G243200 Gossypium raimondii HOM05D004774 ORTHO05D005514 5.4e-49 198.7 266 39.5
Gohir.D07G215400 Gossypium hirsutum HOM05D004774 ORTHO05D005514 7.0e-49 198.4 266 39.5
Ciclev10023915m.g Citrus clementina HOM05D004774 ORTHO05D005514 1.6e-48 197.2 193 51.3
A09p66780 Brassica napus HOM05D004774 ORTHO05D005514 2.7e-48 196.4 260 40.0
Ca_26554_v3 Cicer arietinum L. HOM05D004774 ORTHO05D005514 3.5e-48 196.1 262 40.5
PGSC0003DMG400011166 Solanum tuberosum HOM05D004774 ORTHO05D005514 4.5e-48 195.7 203 51.2
SGA_v2.0_scaffold43G16236 Striga asiatica HOM05D004774 ORTHO05D005514 5.9e-48 195.3 194 51.0
C08p51000 Brassica napus HOM05D004774 ORTHO05D005514 1.3e-47 194.1 259 41.7
Cfa005024 Carpinus fangiana HOM05D004774 ORTHO05D005514 1.3e-47 194.1 259 40.2
CsaV3_7G030220 Cucumis sativus L. HOM05D004774 ORTHO05D005514 1.7e-47 193.7 259 38.2
Prupe.2G103200 Prunus persica HOM05D004774 ORTHO05D005514 1.7e-47 193.7 261 40.6
Psat3g097920 Pisum sativum HOM05D004774 ORTHO05D005514 3.8e-47 192.6 261 39.5
Sabra02G0035700 Salix brachista HOM05D004774 ORTHO05D005514 3.8e-47 192.6 197 48.7
BolC8t52628H Brassica oleracea HOM05D004774 ORTHO05D005514 6.5e-47 191.8 259 40.5
Duzib211G0067 Durio zibethinus HOM05D004774 ORTHO05D005514 6.5e-47 191.8 265 38.5
Sed0022653 Sechium edule HOM05D004774 ORTHO05D005514 6.5e-47 191.8 260 38.1
PSO017G6900 Papaver somniferum HOM05D004774 ORTHO05D005514 1.1e-46 191.0 261 41.4
Hma1.2p1_1029F.1_g249620 Hydrangea macrophylla HOM05D004774 ORTHO05D005514 1.5e-46 190.7 295 38.6
Hma1.2p1_1029F.1_g249641 Hydrangea macrophylla HOM05D004774 ORTHO05D005514 1.5e-46 190.7 295 38.6
Lj4g0014477 Lotus japonicus HOM05D004774 ORTHO05D005514 1.5e-46 190.7 260 40.8
PSO170G5180 Papaver somniferum HOM05D004774 ORTHO05D005514 1.5e-46 190.7 261 41.0
Medtr8g072680 Medicago truncatula HOM05D004774 ORTHO05D005514 2.7e-45 186.4 260 38.5
Phvul.010G020150 Phaseolus vulgaris HOM05D004774 ORTHO05D005514 3.6e-45 186.0 273 39.6
Phvul.010G020200 Phaseolus vulgaris HOM05D004774 ORTHO05D005514 3.6e-45 186.0 273 39.6
AT1G06790 Arabidopsis thaliana HOM05D004774 ORTHO05D005514 4.7e-45 185.7 197 47.2
AUR62015525 Chenopodium quinoa HOM05D004774 ORTHO05D005514 4.7e-45 185.7 193 49.2
Duzib211G0109 Durio zibethinus HOM05D004774 ORTHO05D005514 8.0e-45 184.9 265 38.1
Glyma.19G215300 Glycine max HOM05D004774 ORTHO05D005514 8.0e-45 184.9 274 39.4
MELO3C023634.2 Cucumis melo HOM05D004774 ORTHO05D005514 1.0e-44 184.5 259 37.5
DCAR_002682 Daucus carota HOM05D004774 ORTHO05D005514 1.4e-44 184.1 182 51.1
VMungo0331G0358 Vigna mungo HOM05D002747 ORTHO05D005514 5.2e-44 182.2 273 39.6
Glyma.03G218500 Glycine max HOM05D004774 ORTHO05D005514 6.8e-44 181.8 274 38.0
Peaxi162Scf00934g00135 Petunia axillaris HOM05D004774 ORTHO05D005514 6.8e-44 181.8 261 39.1
Eucgr.B01492 Eucalyptus grandis HOM05D004774 ORTHO05D005514 1.2e-43 181.0 258 41.1
Sp1g05530 Schrenkiella parvula HOM05D004774 ORTHO05D005514 2.6e-43 179.9 192 46.4
BcaC07g42048 Brassica carinata HOM05D004774 ORTHO05D005514 5.7e-43 178.7 198 46.0
MBI04_g06856_MAGBIO Magnolia biondii HOM05D004774 ORTHO05D005514 5.7e-43 178.7 259 40.2
HPP92_027004 Vanilla planifolia HOM05D004774 ORTHO05D005514 6.3e-42 175.3 261 38.7
SEGI_34955 Sequoiadendron giganteum HOM05D004774 ORTHO05D005514 8.3e-42 174.9 259 37.5
ECA247G2354 Erigeron canadensis HOM05D002220 ORTHO05D008182 1.1e-41 174.5 258 38.8
HPP92_015388 Vanilla planifolia HOM05D004774 ORTHO05D005514 1.1e-41 174.5 261 38.3
FvH4_1g22880 Fragaria vesca HOM05D004774 ORTHO05D005514 4.5e-40 169.1 259 39.0
RcHm_v2.0_Chr5g0063451 Rosa chinensis HOM05D004774 ORTHO05D005514 4.5e-40 169.1 259 38.2
Sc04g0000740 Simmondsia chinensis HOM05D004774 ORTHO05D005514 1.3e-39 167.5 261 37.5
SMO012G0037 Selaginella moellendorffii HOM05D004774 ORTHO05D005514 2.3e-39 166.8 259 36.3
Lj4A469T41 Lonicera japonica HOM05D004774 ORTHO05D005514 5.0e-39 165.6 154 53.9
FAN19G2773 Fragaria x ananassa HOM05D004774 ORTHO05D005514 6.6e-39 165.2 259 38.6
Mapoly0050s0102 Marchantia polymorpha HOM05D004774 ORTHO05D005514 6.6e-39 165.2 259 34.7
VMungo1309G2525 Vigna mungo HOM05D004774 ORTHO05D005514 1.2e-37 161.0 207 43.5
Ca_27275_v3 Cicer arietinum L. HOM05D004774 ORTHO05D005514 1.6e-37 160.6 185 43.8
Pp3c7_17850 Physcomitrium patens HOM05D004774 ORTHO05D005514 8.0e-37 158.3 260 33.5
Os07g0477000 Oryza sativa ssp. japonica HOM05D004774 ORTHO05D005514 1.0e-36 157.9 259 36.3
FAN23G2064 Fragaria x ananassa HOM05D004774 ORTHO05D005514 5.2e-36 155.6 277 35.0
FAN26G2874 Fragaria x ananassa HOM05D004774 ORTHO05D005514 6.8e-36 155.2 193 44.0
Nn1g02575 Nelumbo nucifera HOM05D004774 ORTHO05D005514 2.9e-34 149.8 162 45.7
AagrBONN_evm.TU.Sc2ySwM_344.4376 Anthoceros agrestis HOM05D004774 ORTHO05D005514 4.9e-34 149.1 259 32.8
Cre12.g538400 Chlamydomonas reinhardtii HOM05D004774 ORTHO05D005514 6.4e-34 148.7 261 35.2
PSO339G5528 Papaver somniferum HOM05D004774 ORTHO05D005514 4.1e-33 146.0 179 44.1
BcaC07g42538 Brassica carinata HOM05D004774 ORTHO05D005514 5.9e-32 142.1 154 46.1
SHI09938 Sapria himalayana HOM05D004774 ORTHO05D000023 1.1e-30 137.9 159 45.9
MCO09G483 Micromonas commoda HOM05D004774 ORTHO05D005514 1.9e-30 137.1 261 32.6
HanXRQChr14g0454071 Helianthus annuus HOM05D004774 ORTHO05D005514 3.1e-28 129.8 159 42.1
Zm00001eb319960 Zea mays HOM05D004774 ORTHO05D005514 9.8e-27 124.8 141 46.8
PGR119G0353 Punica granatum HOM05D004774 ORTHO05D005514 1.3e-26 124.4 171 39.2
Aqoxy7G03987 Aquilegia oxysepala HOM05D004774 ORTHO05D005514 2.7e-24 116.7 125 44.8
SMO298G0040 Selaginella moellendorffii HOM05D004774 ORTHO05D005514 3.5e-24 116.3 259 29.7
FAN11G3419 Fragaria x ananassa HOM05D004774 ORTHO05D005514 9.5e-22 108.2 129 45.0
TPR.G27929 Trifolium pratense HOM05D004774 ORTHO05D005514 6.8e-20 102.1 131 41.2
ATR0665G644 Amborella trichopoda HOM05D004774 ORTHO05D005514 8.9e-20 101.7 125 44.0
CDE07G0321 Ceratophyllum demersum HOM05D004774 ORTHO05D005514 2.0e-19 100.5 207 32.9
SEGI_28935 Sequoiadendron giganteum HOM05D004774 ORTHO05D005514 3.4e-19 99.8 96 52.1
CDE07G1842 Ceratophyllum demersum HOM05D004774 ORTHO05D005514 5.8e-19 99.0 118 44.9
arahy.Tifrunner.gnm1.ann1.KW6T12 Arachis hypogaea HOM05D004774 ORTHO05D005514 7.5e-19 98.6 124 41.1
FAN21G2916 Fragaria x ananassa HOM05D004774 ORTHO05D005514 6.4e-18 95.5 128 39.8
arahy.Tifrunner.gnm1.ann1.SKV00U Arachis hypogaea HOM05D004774 ORTHO05D005514 1.1e-17 94.7 134 36.6
GSVIVG01021945001 Vitis vinifera HOM05D004774 ORTHO05D005514 2.7e-16 90.1 125 42.4
FvH4_3g35340 Fragaria vesca HOM05D004774 ORTHO05D005514 8.1e-13 78.6 91 47.3
Prupe.7G016800 Prunus persica HOM05D004774 ORTHO05D005514 8.1e-13 78.6 95 42.1
GSVIVG01021951001 Vitis vinifera HOM05D004774 ORTHO05D005514 4.0e-12 76.3 136 35.3
GSVIVG01000731001 Vitis vinifera HOM05D004774 ORTHO05D005514 6.8e-12 75.5 102 45.1
GSVIVG01004486001 Vitis vinifera HOM05D004774 ORTHO05D005514 1.5e-11 74.3 98 40.8
PRCOL_00000420 Prasinoderma coloniale HOM05D004385 ORTHO05D005245 2.0e-11 73.9 176 32.4
TPR.G26057 Trifolium pratense HOM05D004774 ORTHO05D005514 3.4e-11 73.2 63 47.6
Haze_02362 Corylus avellana HOM05D004774 ORTHO05D005514 1.3e-10 71.2 97 38.1
TPR.G27925 Trifolium pratense HOM05D004774 ORTHO05D005514 2.2e-10 70.5 119 35.3
BolC8t46832H Brassica oleracea HOM05D004774 ORTHO05D005514 1.4e-09 67.8 61 50.8
TPR.G27610 Trifolium pratense HOM05D004774 ORTHO05D005514 1.4e-09 67.8 95 41.1
Ah.11g042480 Amaranthus hybridus HOM05D004774 ORTHO05D005514 1.3e-07 61.2 105 35.2
GSVIVG01000732001 Vitis vinifera HOM05D004774 ORTHO05D005514 5.1e-07 59.3 96 34.4
Haze_02361 Corylus avellana HOM05D004774 ORTHO05D005514 1.5e-06 57.8 102 33.3
SEGI_25384 Sequoiadendron giganteum HOM05D002720 ORTHO05D002901 1.5e-06 57.8 152 26.3
BolC1t02432H Brassica oleracea HOM05D004774 ORTHO05D033846 5.6e-06 55.8 40 60.0


User provided reference genes

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