Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.YWW8G9 Arachis hypogaea HOM05D000228 ORTHO05D013010 2.7e-129 465.3 227 100.0
arahy.Tifrunner.gnm1.ann1.RU3ERW Arachis hypogaea HOM05D000228 ORTHO05D006129 1.5e-52 210.3 212 57.1
arahy.Tifrunner.gnm1.ann1.WX3P41 Arachis hypogaea HOM05D000228 ORTHO05D006129 1.4e-45 187.2 184 56.5
arahy.Tifrunner.gnm1.ann1.08AYB8 Arachis hypogaea HOM05D000228 ORTHO05D013010 1.5e-42 177.2 214 49.1
Lalb_Chr05g0214761 Lupinus albus HOM05D000228 ORTHO05D006129 2.4e-37 159.8 199 48.2
Glyma.01G215700 Glycine max HOM05D000228 ORTHO05D006129 7.7e-36 154.8 206 45.1
Glyma.11G026700 Glycine max HOM05D000228 ORTHO05D006129 6.5e-35 151.8 204 44.6
Lalb_Chr09g0324731 Lupinus albus HOM05D000228 ORTHO05D006129 1.5e-34 150.6 199 46.7
RcHm_v2.0_Chr7g0199481 Rosa chinensis HOM05D000228 ORTHO05D006129 5.5e-34 148.7 186 44.6
Lalb_Chr05g0225101 Lupinus albus HOM05D000228 ORTHO05D013010 2.7e-33 146.4 206 43.7
Phvul.002G153700 Phaseolus vulgaris HOM05D000228 ORTHO05D006129 6.1e-33 145.2 198 43.9
VMungo1215G3193 Vigna mungo HOM05D000228 ORTHO05D006129 8.0e-33 144.8 198 42.9
Thecc.03G270300 Theobroma cacao HOM05D000228 ORTHO05D006129 1.0e-32 144.4 203 41.4
FAN04G1469 Fragaria x ananassa HOM05D000228 ORTHO05D006129 4.0e-32 142.5 186 41.9
Psat2g181400 Pisum sativum HOM05D000228 ORTHO05D006129 8.8e-32 141.4 201 46.3
Medtr5g011000 Medicago truncatula HOM05D000228 ORTHO05D006129 1.2e-31 141.0 201 45.3
QL12p017019 Quercus lobata HOM05D000228 ORTHO05D006129 2.6e-31 139.8 201 41.8
Eucgr.D01929 Eucalyptus grandis HOM05D000228 ORTHO05D006129 7.5e-31 138.3 201 39.3
FAN08G3600 Fragaria x ananassa HOM05D000228 ORTHO05D006129 7.5e-31 138.3 185 39.5
FvH4_5g01400 Fragaria vesca HOM05D000228 ORTHO05D006129 9.8e-31 137.9 186 40.9
FAN18G2520 Fragaria x ananassa HOM05D000228 ORTHO05D006129 9.8e-31 137.9 186 40.9
TPR.G6660 Trifolium pratense HOM05D000228 ORTHO05D006129 9.8e-31 137.9 201 45.3
GSVIVG01019869001 Vitis vinifera HOM05D000228 ORTHO05D006129 9.8e-31 137.9 199 42.2
Cfa012094 Carpinus fangiana HOM05D000228 ORTHO05D006129 1.3e-30 137.5 198 40.9
Prupe.5G089300 Prunus persica HOM05D000228 ORTHO05D006129 1.3e-30 137.5 191 42.4
MELO3C014034.2 Cucumis melo HOM05D000228 ORTHO05D006129 3.7e-30 136.0 204 36.3
CsaV3_3G003630 Cucumis sativus L. HOM05D000228 ORTHO05D006129 3.7e-30 136.0 204 36.3
QL05p069269 Quercus lobata HOM05D000228 ORTHO05D006129 3.7e-30 136.0 204 37.7
Lsat_1_v5_gn_3_5900 Lactuca sativa HOM05D000228 ORTHO05D006129 4.8e-30 135.6 194 39.2
ClCG00G000380 Citrullus lanatus HOM05D000228 ORTHO05D006129 6.3e-30 135.2 204 35.8
ClCG10G003630 Citrullus lanatus HOM05D000228 ORTHO05D006129 6.3e-30 135.2 204 35.8
Ciclev10018489m.g Citrus clementina HOM05D000228 ORTHO05D006129 8.3e-30 134.8 200 38.5
FAN13G2476 Fragaria x ananassa HOM05D000228 ORTHO05D006129 1.1e-29 134.4 183 41.5
Gohir.A08G178200 Gossypium hirsutum HOM05D000228 ORTHO05D006129 1.4e-29 134.0 201 40.3
Gohir.D08G196600 Gossypium hirsutum HOM05D000228 ORTHO05D006129 1.4e-29 134.0 201 40.3
Gorai.004G207300 Gossypium raimondii HOM05D000228 ORTHO05D006129 1.4e-29 134.0 201 40.3
COL.COLO4_05280 Corchorus olitorius HOM05D000228 ORTHO05D006129 2.4e-29 133.3 224 37.5
ECA246G3981 Erigeron canadensis HOM05D000228 ORTHO05D006129 5.4e-29 132.1 193 38.9
Sed0014462 Sechium edule HOM05D000228 ORTHO05D006129 2.0e-28 130.2 204 36.3
vmacro14006 Vaccinium macrocarpon HOM05D000228 ORTHO05D006129 2.7e-28 129.8 198 37.4
Sc01g0008810 Simmondsia chinensis HOM05D001804 ORTHO05D006129 3.5e-28 129.4 195 39.5
arahy.Tifrunner.gnm1.ann1.K7S8RA Arachis hypogaea HOM05D000228 ORTHO05D013010 4.5e-28 129.0 94 69.1
Nn6g34281 Nelumbo nucifera HOM05D000228 ORTHO05D006129 5.9e-28 128.6 227 36.1
CSS0022136 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D006129 7.7e-28 128.3 195 39.0
Manes.02G028200 Manihot esculenta HOM05D000228 ORTHO05D006129 1.0e-27 127.9 200 37.5
Potri.001G111300 Populus trichocarpa HOM05D000228 ORTHO05D006129 1.7e-27 127.1 201 39.8
Rhsim07G0095300 Rhododendron simsii HOM05D000228 ORTHO05D006129 2.2e-27 126.7 195 37.9
Ah.12g057750 Amaranthus hybridus HOM05D000228 ORTHO05D006129 5.0e-27 125.6 199 37.2
Dinv39017 Davidia involucrata HOM05D000228 ORTHO05D006129 5.0e-27 125.6 205 36.6
PSO782G2782 Papaver somniferum HOM05D000228 ORTHO05D006129 1.1e-26 124.4 205 36.6
Dinv37697 Davidia involucrata HOM05D000228 ORTHO05D006129 1.5e-26 124.0 205 35.6
Lj8C239G8 Lonicera japonica HOM05D000228 ORTHO05D006129 1.9e-26 123.6 202 36.1
Lj2C197T6 Lonicera japonica HOM05D000228 ORTHO05D006129 2.5e-26 123.2 198 39.4
Atru.chr9.1533 Acer truncatum HOM05D000228 ORTHO05D006129 3.2e-26 122.9 202 40.1
PSO478G3868 Papaver somniferum HOM05D000228 ORTHO05D006129 4.2e-26 122.5 205 36.1
TWI15G0190 Tripterygium wilfordii HOM05D000228 ORTHO05D006129 4.2e-26 122.5 198 38.4
Lj2g0010994 Lotus japonicus HOM05D000228 ORTHO05D006129 5.5e-26 122.1 193 40.9
HanXRQChr06g0165071 Helianthus annuus HOM05D000228 ORTHO05D006129 7.2e-26 121.7 196 35.7
TWI60G0610 Tripterygium wilfordii HOM05D000228 ORTHO05D006129 1.2e-25 120.9 200 36.0
TAR636G2974 Trochodendron aralioides HOM05D000228 ORTHO05D006129 4.7e-25 119.0 210 35.2
AUR62017301 Chenopodium quinoa HOM05D000228 ORTHO05D006129 6.1e-25 118.6 197 37.1
AUR62010662 Chenopodium quinoa HOM05D000228 ORTHO05D006129 8.0e-25 118.2 197 37.1
Hma1.2p1_0138F.1_g062630 Hydrangea macrophylla HOM05D000228 ORTHO05D006129 1.0e-24 117.9 201 37.3
PGR031G2544 Punica granatum HOM05D000228 ORTHO05D006129 1.8e-24 117.1 205 37.1
Sabra01G0084800 Salix brachista HOM05D000228 ORTHO05D006129 2.3e-24 116.7 201 38.8
Hund11530 Selenicereus undatus HOM05D000228 ORTHO05D006129 2.3e-24 116.7 188 37.8
SGA_v2.0_scaffold146G36222 Striga asiatica HOM05D000228 ORTHO05D006129 3.0e-24 116.3 198 36.4
MD04G1068800 Malus domestica HOM05D000228 ORTHO05D006129 8.8e-24 114.8 196 37.2
MSTRG.25571 Avicennia marina HOM05D000228 ORTHO05D006129 2.0e-23 113.6 198 36.4
unitig_22.g5477 Utricularia gibba HOM05D000228 ORTHO05D006129 3.4e-23 112.8 195 34.4
AT1G63020 Arabidopsis thaliana HOM05D000228 ORTHO05D006129 4.4e-23 112.5 202 32.7
Migut.A00916 Erythranthe guttata HOM05D000228 ORTHO05D006129 5.7e-23 112.1 198 34.3
THA.LOC104809424 Tarenaya hassleriana HOM05D000228 ORTHO05D006129 5.7e-23 112.1 201 32.8
CANSAT21G2272 Cannabis sativa HOM05D000228 ORTHO05D006129 1.7e-22 110.5 209 34.4
MBI12_g02094_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D006129 1.7e-22 110.5 197 31.5
AL2G12580 Arabidopsis lyrata HOM05D000228 ORTHO05D006129 2.8e-22 109.8 202 32.2
arahy.Tifrunner.gnm1.ann1.RLQ4ZH Arachis hypogaea HOM05D000228 ORTHO05D013010 2.8e-22 109.8 92 59.8
Cc08_g13910 Coffea canephora HOM05D000228 ORTHO05D006129 2.8e-22 109.8 198 36.4
SHI01912 Sapria himalayana HOM05D000228 ORTHO05D006129 1.4e-21 107.5 186 37.1
Aa31LG2G520 Aethionema arabicum HOM05D000228 ORTHO05D006129 2.4e-21 106.7 206 32.0
Oeu062351.1 Olea europaea HOM05D000228 ORTHO05D006129 3.1e-21 106.3 198 33.8
Aqoxy1G00844 Aquilegia oxysepala HOM05D000228 ORTHO05D006129 4.1e-21 105.9 226 31.4
Sp2g01560 Schrenkiella parvula HOM05D000228 ORTHO05D006129 5.4e-21 105.5 202 32.2
CAN.G981.44 Capsicum annuum HOM05D000228 ORTHO05D006129 1.2e-20 104.4 193 34.7
CAN.G981.46 Capsicum annuum HOM05D000228 ORTHO05D006129 1.2e-20 104.4 195 35.4
arahy.Tifrunner.gnm1.ann1.V4AZPZ Arachis hypogaea HOM05D031798 ORTHO05D013010 2.0e-20 103.6 91 62.6
Carub.0002s0198 Capsella rubella HOM05D000228 ORTHO05D006129 2.0e-20 103.6 199 32.7
Thhalv10023214m.g Eutrema salsugineum HOM05D000228 ORTHO05D006129 2.0e-20 103.6 183 31.7
BcaC06g31930 Brassica carinata HOM05D000228 ORTHO05D006129 3.5e-20 102.8 199 30.2
BcaC02g10404 Brassica carinata HOM05D000228 ORTHO05D006129 7.7e-20 101.7 200 31.0
C04p29320 Brassica napus HOM05D000228 ORTHO05D006129 7.7e-20 101.7 200 31.0
BolC4t24462H Brassica oleracea HOM05D000228 ORTHO05D006129 7.7e-20 101.7 200 31.0
MD06G1069300 Malus domestica HOM05D000228 ORTHO05D006129 1.0e-19 101.3 115 45.2
Nitab4.5_0007891g0030 Nicotiana tabacum HOM05D000228 ORTHO05D006129 1.0e-19 101.3 186 35.5
EL10Ac5g12720 Beta vulgaris HOM05D000228 ORTHO05D006129 1.7e-19 100.5 124 43.5
Nitab4.5_0001714g0190 Nicotiana tabacum HOM05D000228 ORTHO05D006129 1.7e-19 100.5 186 34.4
arahy.Tifrunner.gnm1.ann1.ACP38X Arachis hypogaea HOM05D031798 ORTHO05D013010 2.9e-19 99.8 105 54.3
A03p68370 Brassica napus HOM05D000228 ORTHO05D006129 2.9e-19 99.8 199 29.1
BraA01t02634Z Brassica rapa HOM05D000228 ORTHO05D006129 2.9e-19 99.8 199 29.1
C09p15860 Brassica napus HOM05D000228 ORTHO05D006129 3.8e-19 99.4 206 28.6
BcaC04g22731 Brassica carinata HOM05D000228 ORTHO05D006129 6.6e-19 98.6 206 28.6
A09p13380 Brassica napus HOM05D000228 ORTHO05D006129 1.1e-18 97.8 201 29.4
BraA09t36984Z Brassica rapa HOM05D000228 ORTHO05D006129 1.1e-18 97.8 201 29.4
BolC9t54499H Brassica oleracea HOM05D000228 ORTHO05D006129 1.5e-18 97.4 206 28.6
Haze_08958 Corylus avellana HOM05D000228 ORTHO05D006129 2.1e-17 93.6 179 35.2
DCAR_008426 Daucus carota HOM05D000228 ORTHO05D006129 2.1e-17 93.6 201 31.3
DCAR_006765 Daucus carota HOM05D000228 ORTHO05D006129 1.0e-16 91.3 197 29.9
arahy.Tifrunner.gnm1.ann1.D50IR8 Arachis hypogaea HOM05D000228 ORTHO05D013010 2.3e-16 90.1 82 59.8
CiPaw.12G099100 Carya illinoinensis HOM05D000228 ORTHO05D013010 4.0e-16 89.4 110 43.6
Gohir.A11G021201 Gossypium hirsutum HOM05D000228 ORTHO05D013010 5.2e-16 89.0 115 41.7
arahy.Tifrunner.gnm1.ann1.HG0937 Arachis hypogaea HOM05D000228 ORTHO05D013010 2.6e-15 86.7 74 68.9
TPR.G33168 Trifolium pratense HOM05D000228 ORTHO05D013010 9.8e-15 84.7 117 44.4
ATR0757G037 Amborella trichopoda HOM05D000228 ORTHO05D006129 5.4e-13 79.0 201 28.4
Os09g0555200 Oryza sativa ssp. japonica HOM05D000228 ORTHO05D006129 9.2e-13 78.2 213 25.4
Os04g0572600 Oryza sativa ssp. japonica HOM05D000228 ORTHO05D006129 1.2e-12 77.8 213 26.3
arahy.Tifrunner.gnm1.ann1.6SF4HQ Arachis hypogaea HOM05D000228 ORTHO05D013010 1.9e-10 70.5 63 55.6
CiPaw.12G099200 Carya illinoinensis HOM05D000228 ORTHO05D006129 4.3e-10 69.3 78 48.7
Zm00001eb035080 Zea mays HOM05D000228 ORTHO05D006129 5.6e-10 68.9 207 25.6
HPP92_014991 Vanilla planifolia HOM05D000228 ORTHO05D013010 2.3e-08 63.5 103 35.0
TPR.G33163 Trifolium pratense HOM05D000228 ORTHO05D006129 1.2e-07 61.2 69 49.3
CARHR048610 Cardamine hirsuta HOM05D000228 ORTHO05D013010 2.0e-07 60.5 103 31.1


User provided reference genes

Program Settings