Gene: FAN13G2476
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN13G2476
- Transcript Identifier FAN13G2476.1
- Gene Type Coding gene
- Location Fvb5-2 : 792908-802526 : negative
Gene Family Information
- ID HOM05D000228
- #Genes/#Species 1809/100
- Phylogenetic origin
- ID ORTHO05D006129
- #Genes/#Species 147/93
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id augustus_masked-Fvb5-2-processed-gene-8.0.v1.0.a1
- pacid 50561265
Descriptions
- Description PTHR19376:SF40 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006351 | IEA | InterPro | transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003899 | IEA | InterPro | DNA-directed 5'-3' RNA polymerase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR044893 | RNA polymerase Rpb1, clamp domain superfamily |
| IPR040403 | DNA-directed RNA polymerase IV/V subunit 1, N-terminal |
| IPR006592 | RNA polymerase, N-terminal |
| IPR007083 | RNA polymerase Rpb1, domain 4 |
| IPR038120 | RNA polymerase Rpb1, funnel domain superfamily |
| IPR000722 | RNA polymerase, alpha subunit |
| IPR042102 | RNA polymerase Rpb1, domain 3 superfamily |
| IPR007066 | RNA polymerase Rpb1, domain 3 |
| Mapman id | Description |
|---|---|
| 15.1.4.1 | RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol IV catalytic components.subunit 1 |