Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.YP6RFP Arachis hypogaea HOM05D003738 ORTHO05D005143 1.8e-36 155.2 71 100.0
arahy.Tifrunner.gnm1.ann1.E0ZWVI Arachis hypogaea HOM05D003738 ORTHO05D005143 7.3e-17 90.1 55 78.2
arahy.Tifrunner.gnm1.ann1.J2B3IW Arachis hypogaea HOM05D003738 ORTHO05D005143 2.1e-16 88.6 54 75.9
arahy.Tifrunner.gnm1.ann1.KYQ4XK Arachis hypogaea HOM05D003738 ORTHO05D005143 2.1e-16 88.6 55 76.4
arahy.Tifrunner.gnm1.ann1.UI9B1P Arachis hypogaea HOM05D003738 ORTHO05D005143 3.6e-16 87.8 55 76.4
Lj2g0012793 Lotus japonicus HOM05D003738 ORTHO05D005143 6.2e-16 87.0 55 74.5
Lalb_Chr06g0176761 Lupinus albus HOM05D003738 ORTHO05D005143 1.4e-15 85.9 55 72.7
arahy.Tifrunner.gnm1.ann1.8AFI1C Arachis hypogaea HOM05D003738 ORTHO05D005143 6.8e-15 83.6 54 68.5
arahy.Tifrunner.gnm1.ann1.EHW2CP Arachis hypogaea HOM05D003738 ORTHO05D005143 8.9e-15 83.2 51 72.5
Glyma.14G207700 Glycine max HOM05D003738 ORTHO05D005143 1.5e-14 82.4 55 70.9
EL10Ac2g04518 Beta vulgaris HOM05D003738 ORTHO05D005143 2.0e-14 82.0 55 67.3
Glyma.02G238800 Glycine max HOM05D003738 ORTHO05D005143 2.0e-14 82.0 55 70.9
Lalb_Chr02g0160571 Lupinus albus HOM05D003738 ORTHO05D005143 2.6e-14 81.6 55 69.1
AUR62023216 Chenopodium quinoa HOM05D003738 ORTHO05D005143 3.4e-14 81.3 55 65.5
AUR62023263 Chenopodium quinoa HOM05D003738 ORTHO05D005143 3.4e-14 81.3 55 65.5
RcHm_v2.0_Chr3g0494041 Rosa chinensis HOM05D003738 ORTHO05D005143 4.4e-14 80.9 55 69.1
Ah.16g101450 Amaranthus hybridus HOM05D003738 ORTHO05D005143 7.5e-14 80.1 55 63.6
Cpa.g.sc170.16 Carica papaya HOM05D003738 ORTHO05D005143 7.5e-14 80.1 55 69.1
Atru.chr1.1579 Acer truncatum HOM05D003738 ORTHO05D005143 9.9e-14 79.7 55 69.1
MSTRG.15310 Avicennia marina HOM05D003738 ORTHO05D005143 9.9e-14 79.7 55 67.3
Ca_04135_v3 Cicer arietinum L. HOM05D003738 ORTHO05D005143 9.9e-14 79.7 55 65.5
Phvul.008G243200 Phaseolus vulgaris HOM05D003738 ORTHO05D005143 9.9e-14 79.7 55 69.1
TPR.G25203 Trifolium pratense HOM05D003738 ORTHO05D005143 9.9e-14 79.7 55 63.6
VMungo0647G1516 Vigna mungo HOM05D003738 ORTHO05D005143 9.9e-14 79.7 55 69.1
CANSAT78G1141 Cannabis sativa HOM05D003738 ORTHO05D005143 1.3e-13 79.3 55 67.3
CSS0050020 Camellia sinensis var. sinensis HOM05D003738 ORTHO05D005143 1.7e-13 79.0 55 67.3
FvH4_1g28990 Fragaria vesca HOM05D003738 ORTHO05D005143 1.7e-13 79.0 55 67.3
FAN19G0768 Fragaria x ananassa HOM05D003738 ORTHO05D005143 1.7e-13 79.0 55 67.3
FAN23G1334 Fragaria x ananassa HOM05D003738 ORTHO05D005143 1.7e-13 79.0 55 67.3
FAN26G1505 Fragaria x ananassa HOM05D003738 ORTHO05D005143 1.7e-13 79.0 55 67.3
MD00G1054500 Malus domestica HOM05D003738 ORTHO05D005143 1.7e-13 79.0 55 67.3
QL02p049823 Quercus lobata HOM05D003738 ORTHO05D005143 1.7e-13 79.0 55 67.3
Sc10g0001020 Simmondsia chinensis HOM05D003738 ORTHO05D005143 1.7e-13 79.0 55 65.5
Cc07_g08440 Coffea canephora HOM05D003738 ORTHO05D005143 2.2e-13 78.6 55 65.5
Eucgr.F02797 Eucalyptus grandis HOM05D003738 ORTHO05D005143 2.2e-13 78.6 55 67.3
MD09G1258100 Malus domestica HOM05D003738 ORTHO05D005143 2.2e-13 78.6 55 65.5
Medtr6g004200 Medicago truncatula HOM05D003738 ORTHO05D005143 2.2e-13 78.6 55 63.6
ATR0057G018 Amborella trichopoda HOM05D003738 ORTHO05D005143 2.9e-13 78.2 55 63.6
PSO017G1959 Papaver somniferum HOM05D003738 ORTHO05D005143 2.9e-13 78.2 55 67.3
PSO170G1643 Papaver somniferum HOM05D003738 ORTHO05D005143 2.9e-13 78.2 55 67.3
Hund13699 Selenicereus undatus HOM05D003738 ORTHO05D005143 2.9e-13 78.2 55 65.5
HPP92_003826 Vanilla planifolia HOM05D003738 ORTHO05D005143 2.9e-13 78.2 55 65.5
BcaC04g18797 Brassica carinata HOM05D003738 ORTHO05D005143 3.7e-13 77.8 54 66.7
A10p22030 Brassica napus HOM05D003738 ORTHO05D005143 3.7e-13 77.8 54 66.7
C09p59780 Brassica napus HOM05D003738 ORTHO05D005143 3.7e-13 77.8 54 66.7
BolC9t58818H Brassica oleracea HOM05D003738 ORTHO05D005143 3.7e-13 77.8 54 66.7
BraA10t44260Z Brassica rapa HOM05D003738 ORTHO05D005143 3.7e-13 77.8 54 66.7
Thhalv10013104m.g Eutrema salsugineum HOM05D003738 ORTHO05D005143 3.7e-13 77.8 54 66.7
Sed0022193 Sechium edule HOM05D003738 ORTHO05D005143 3.7e-13 77.8 55 65.5
GSVIVG01030948001 Vitis vinifera HOM05D003738 ORTHO05D005143 3.7e-13 77.8 55 67.3
Carub.0006s1559 Capsella rubella HOM05D003738 ORTHO05D005143 4.9e-13 77.4 54 64.8
CARHR195830 Cardamine hirsuta HOM05D003738 ORTHO05D005143 4.9e-13 77.4 54 64.8
ClCG07G016430 Citrullus lanatus HOM05D003738 ORTHO05D005143 4.9e-13 77.4 55 63.6
CsaV3_4G010390 Cucumis sativus L. HOM05D003738 ORTHO05D005143 4.9e-13 77.4 55 65.5
Nn4g24034 Nelumbo nucifera HOM05D003738 ORTHO05D005143 4.9e-13 77.4 55 65.5
Psat1g052800 Pisum sativum HOM05D003738 ORTHO05D005143 4.9e-13 77.4 55 61.8
Potri.004G094600 Populus trichocarpa HOM05D003738 ORTHO05D005143 4.9e-13 77.4 55 67.3
Prupe.3G150000 Prunus persica HOM05D003738 ORTHO05D005143 4.9e-13 77.4 55 65.5
TWI77G0590 Tripterygium wilfordii HOM05D003738 ORTHO05D005143 4.9e-13 77.4 55 67.3
BcaB08g36776 Brassica carinata HOM05D003738 ORTHO05D005143 6.4e-13 77.0 54 64.8
COL.COLO4_12270 Corchorus olitorius HOM05D003738 ORTHO05D005143 6.4e-13 77.0 55 67.3
Lj2A438T57 Lonicera japonica HOM05D003738 ORTHO05D005143 6.4e-13 77.0 55 65.5
GSVIVG01013575001 Vitis vinifera HOM05D003738 ORTHO05D005143 6.4e-13 77.0 55 65.5
Aqoxy3G00165 Aquilegia oxysepala HOM05D003738 ORTHO05D005143 8.3e-13 76.6 55 63.6
AT5G17380 Arabidopsis thaliana HOM05D003738 ORTHO05D005143 8.3e-13 76.6 54 64.8
CAN.G625.63 Capsicum annuum HOM05D003738 ORTHO05D005143 8.3e-13 76.6 55 65.5
Dinv14852 Davidia involucrata HOM05D003738 ORTHO05D005143 8.3e-13 76.6 55 65.5
ECA238G0020 Erigeron canadensis HOM05D003738 ORTHO05D005143 8.3e-13 76.6 55 65.5
Nitab4.5_0002456g0020 Nicotiana tabacum HOM05D003738 ORTHO05D005143 8.3e-13 76.6 55 65.5
Nitab4.5_0007290g0010 Nicotiana tabacum HOM05D003738 ORTHO05D005143 8.3e-13 76.6 55 65.5
Nitab4.5_0011323g0010 Nicotiana tabacum HOM05D003738 ORTHO05D005143 8.3e-13 76.6 55 65.5
Oeu061823.1 Olea europaea HOM05D003738 ORTHO05D005143 8.3e-13 76.6 55 65.5
PSO455G0115 Papaver somniferum HOM05D003738 ORTHO05D005143 8.3e-13 76.6 55 65.5
Rhsim10G0076800 Rhododendron simsii HOM05D003738 ORTHO05D005143 8.3e-13 76.6 55 67.3
Solyc02g091100.3 Solanum lycopersicum HOM05D003738 ORTHO05D005143 8.3e-13 76.6 55 65.5
Sopen02g035750 Solanum pennellii HOM05D003738 ORTHO05D005143 8.3e-13 76.6 55 65.5
PGSC0003DMG400030633 Solanum tuberosum HOM05D003738 ORTHO05D005143 8.3e-13 76.6 55 65.5
TAR374G1203 Trochodendron aralioides HOM05D003738 ORTHO05D005143 8.3e-13 76.6 55 65.5
Actinidia36345 Actinidia chinensis HOM05D003738 ORTHO05D005143 1.1e-12 76.3 55 65.5
AL6G28450 Arabidopsis lyrata HOM05D003738 ORTHO05D005143 1.1e-12 76.3 54 64.8
arahy.Tifrunner.gnm1.ann1.3J26XN Arachis hypogaea HOM05D003738 ORTHO05D005143 1.1e-12 76.3 51 70.6
arahy.Tifrunner.gnm1.ann1.85I739 Arachis hypogaea HOM05D003738 ORTHO05D005143 1.1e-12 76.3 49 69.4
HanXRQChr07g0193781 Helianthus annuus HOM05D003738 ORTHO05D005143 1.1e-12 76.3 55 65.5
Peaxi162Scf00129g00317 Petunia axillaris HOM05D003738 ORTHO05D005143 1.1e-12 76.3 55 65.5
TWI74G0253 Tripterygium wilfordii HOM05D003738 ORTHO05D005143 1.1e-12 76.3 55 65.5
Gohir.A11G166650 Gossypium hirsutum HOM05D003738 ORTHO05D005143 1.4e-12 75.9 55 65.5
Gorai.007G185300 Gossypium raimondii HOM05D003738 ORTHO05D005143 1.4e-12 75.9 55 65.5
Lsat_1_v5_gn_2_80860 Lactuca sativa HOM05D003738 ORTHO05D005143 1.4e-12 75.9 55 65.5
Peaxi162Scf00458g00011 Petunia axillaris HOM05D003738 ORTHO05D005143 1.4e-12 75.9 55 65.5
Sabra04G0063900 Salix brachista HOM05D003738 ORTHO05D005143 1.4e-12 75.9 55 67.3
SalBow4G0814 Salvia bowleyana HOM05D003738 ORTHO05D005143 1.4e-12 75.9 55 65.5
vmacro05488 Vaccinium macrocarpon HOM05D003738 ORTHO05D005143 1.4e-12 75.9 55 67.3
MBI16_g21165_MAGBIO Magnolia biondii HOM05D003738 ORTHO05D005143 1.9e-12 75.5 55 63.6
Sp6g26840 Schrenkiella parvula HOM05D003738 ORTHO05D005143 1.9e-12 75.5 54 64.8
Cfa007882 Carpinus fangiana HOM05D003738 ORTHO05D005143 2.4e-12 75.1 55 61.8
CDE07G0683 Ceratophyllum demersum HOM05D003738 ORTHO05D005143 2.4e-12 75.1 55 61.8
Gohir.D11G173000 Gossypium hirsutum HOM05D003738 ORTHO05D005143 2.4e-12 75.1 54 66.7
SHI25638 Sapria himalayana HOM05D003738 ORTHO05D005143 2.4e-12 75.1 55 63.6
Haze_14195 Corylus avellana HOM05D003738 ORTHO05D005143 3.2e-12 74.7 55 61.8
Dinv34815 Davidia involucrata HOM05D003738 ORTHO05D005143 3.2e-12 74.7 55 63.6
Aa31LG11G12270 Aethionema arabicum HOM05D003738 ORTHO05D005143 4.1e-12 74.3 54 64.8
Ciclev10011371m.g Citrus clementina HOM05D003738 ORTHO05D005143 4.1e-12 74.3 55 65.5
Migut.L00189 Erythranthe guttata HOM05D003738 ORTHO05D005143 4.1e-12 74.3 55 61.8
SEGI_09825 Sequoiadendron giganteum HOM05D003738 ORTHO05D005143 4.1e-12 74.3 55 58.2
SGA_v2.0_scaffold329G48870 Striga asiatica HOM05D003738 ORTHO05D005143 4.1e-12 74.3 55 65.5
CDE06G1483 Ceratophyllum demersum HOM05D003738 ORTHO05D005143 5.4e-12 73.9 55 61.8
Ciclev10013371m.g Citrus clementina HOM05D003738 ORTHO05D005143 5.4e-12 73.9 55 65.5
Manes.01G113700 Manihot esculenta HOM05D003738 ORTHO05D005143 5.4e-12 73.9 55 65.5
THA.LOC104820853 Tarenaya hassleriana HOM05D003738 ORTHO05D005143 5.4e-12 73.9 54 64.8
TAR629G2166 Trochodendron aralioides HOM05D003738 ORTHO05D005143 5.4e-12 73.9 54 64.8
Zm00001eb336870 Zea mays HOM05D003738 ORTHO05D005143 5.4e-12 73.9 55 61.8
COL.COLO4_27155 Corchorus olitorius HOM05D003738 ORTHO05D005143 7.1e-12 73.6 55 63.6
MELO3C010381.2 Cucumis melo HOM05D003738 ORTHO05D005143 9.2e-12 73.2 55 61.8
AagrBONN_evm.TU.Sc2ySwM_369.580 Anthoceros agrestis HOM05D003738 ORTHO05D005143 2.7e-11 71.6 55 58.2
CiPaw.03G065800 Carya illinoinensis HOM05D003738 ORTHO05D005143 2.7e-11 71.6 55 61.8
Rhsim10G0074000 Rhododendron simsii HOM05D003738 ORTHO05D005143 3.5e-11 71.2 55 61.8
Duzib138G1092 Durio zibethinus HOM05D003738 ORTHO05D005143 4.6e-11 70.9 54 61.1
arahy.Tifrunner.gnm1.ann1.S5LGPQ Arachis hypogaea HOM05D003738 ORTHO05D005143 7.8e-11 70.1 54 63.0
Mapoly0099s0049 Marchantia polymorpha HOM05D003738 ORTHO05D005143 7.8e-11 70.1 55 56.4
Pp3c3_25360 Physcomitrium patens HOM05D003738 ORTHO05D005143 7.8e-11 70.1 55 58.2
Duzib133G1513 Durio zibethinus HOM05D003738 ORTHO05D005143 1.7e-10 68.9 55 58.2
HanXRQChr02g0040721 Helianthus annuus HOM05D003738 ORTHO05D005143 1.7e-10 68.9 55 61.8
Rhsim10G0075800 Rhododendron simsii HOM05D003738 ORTHO05D005143 3.9e-10 67.8 55 60.0
Rhsim05G0052500 Rhododendron simsii HOM05D003738 ORTHO05D005143 8.6e-10 66.6 55 58.2
Duzib114G0391 Durio zibethinus HOM05D003738 ORTHO05D005143 4.3e-09 64.3 54 59.3
RhsimUnG0182900 Rhododendron simsii HOM05D003738 ORTHO05D005143 4.3e-09 64.3 55 54.5
arahy.Tifrunner.gnm1.ann1.P0BYU6 Arachis hypogaea HOM05D003738 ORTHO05D005143 5.6e-09 63.9 44 68.2
arahy.Tifrunner.gnm1.ann1.996DKV Arachis hypogaea HOM05D003738 ORTHO05D005143 2.1e-08 62.0 44 63.6
Rhsim10G0075200 Rhododendron simsii HOM05D003738 ORTHO05D005143 2.8e-08 61.6 66 47.0
arahy.Tifrunner.gnm1.ann1.TLT49F Arachis hypogaea HOM05D003738 ORTHO05D005143 4.7e-08 60.8 38 73.7
SMO196G0015 Selaginella moellendorffii HOM05D003738 ORTHO05D005143 6.2e-08 60.5 54 51.9
Rhsim10G0074800 Rhododendron simsii HOM05D003738 ORTHO05D005143 1.1e-07 59.7 55 52.7
CBR_g39224 Chara braunii HOM05D003738 ORTHO05D005143 1.4e-07 59.3 55 52.7
arahy.Tifrunner.gnm1.ann1.31213D Arachis hypogaea HOM05D003738 ORTHO05D005143 2.4e-07 58.5 45 60.0
arahy.Tifrunner.gnm1.ann1.XG2Q3Z Arachis hypogaea HOM05D003738 ORTHO05D005143 2.6e-06 55.1 33 72.7


User provided reference genes

Program Settings