Gene: vmacro05488
General Information
Structural Information
- Species Vaccinium macrocarpon
- Gene Identifier vmacro05488
- Transcript Identifier vmacro05488-RA
- Gene Type Coding gene
- Location chr12_Vaccinium_macrocarpon_Stevens_v1 : 29553036-29558810 : positive
Gene Family Information
- ID HOM05D003738
- #Genes/#Species 184/95
- Phylogenetic origin
- ID ORTHO05D005143
- #Genes/#Species 163/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id vmacro05488_Vaccinium_macrocarpon_Stevens_v1
Descriptions
- Description Similar to HACL: 2-hydroxyacyl-CoA lyase (Arabidopsis thaliana OX=3702)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030976 | IEA | InterPro | thiamine pyrophosphate binding | |
| GO:0000287 | IEA | InterPro | magnesium ion binding | |
| GO:0003824 | IEA | InterPro | catalytic activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G17380 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR045025 | TPP-binding domain containing protein HACL1-like |
| IPR029061 | Thiamin diphosphate-binding fold |
| IPR012000 | Thiamine pyrophosphate enzyme, central domain |
| IPR012001 | Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain |
| IPR029035 | DHS-like NAD/FAD-binding domain superfamily |
| IPR011766 | Thiamine pyrophosphate enzyme, C-terminal TPP-binding |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |