Gene: Lsat_1_v5_gn_2_80860
General Information
Structural Information
- Species Lactuca sativa
- Gene Identifier Lsat_1_v5_gn_2_80860
- Transcript Identifier Lsat_1_v5_gn_2_80860.1
- Gene Type Coding gene
- Location Lsat_1_v8_lg_2 : 155379059-155380863 : negative
Gene Family Information
- ID HOM05D003738
- #Genes/#Species 184/95
- Phylogenetic origin
- ID ORTHO05D005143
- #Genes/#Species 163/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Lsat_1_v5_gn_2_80860.v5
- pacid 38956728
Descriptions
- Description K12261 - 2-hydroxyacyl-CoA lyase 1 (HACL1)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030976 | IEA | InterPro | thiamine pyrophosphate binding | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0000287 | IEA | InterPro | magnesium ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G17380 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR045025 | TPP-binding domain containing protein HACL1-like |
| IPR029061 | Thiamin diphosphate-binding fold |
| IPR011766 | Thiamine pyrophosphate enzyme, C-terminal TPP-binding |
| IPR029035 | DHS-like NAD/FAD-binding domain superfamily |
| IPR012001 | Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain |
| IPR012000 | Thiamine pyrophosphate enzyme, central domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |