Gene: AT5G17380

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G17380
  • Transcript Identifier AT5G17380.1
  • Gene Type Coding gene
  • Location Chr5 : 5724920-5726720 : negative

Gene Family Information

  • ID HOM05D003738
  • #Genes/#Species 184/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G17380.1
  • uniprot Q9LF46

Descriptions

  • Description Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
  • Computational description Thiamine pyrophosphate dependent pyruvate decarboxylase family protein; FUNCTIONS IN: pyruvate decarboxylase activity, magnesium ion binding, thiamin pyrophosphate binding, transferase activity, catalytic activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: chlorsulfuron/imidazolinone resistant 1 (TAIR:AT3G48560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001561
IBA
Gene Ontologyfatty acid alpha-oxidation1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000287
IEA
Gene Ontologymagnesium ion binding
GO:0000287
IEA
InterPromagnesium ion binding
GO:0030976
IEA
GOA Databasethiamine pyrophosphate binding
GO:0030976
IBA
Gene Ontologythiamine pyrophosphate binding1
GO:0030976
IEA
InterProthiamine pyrophosphate binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016831
IEA
GOA Databasecarboxy-lyase activity
GO:0016829
IEA
GOA Databaselyase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005829
IDA
GOA Databasecytosol
GO:0005829
HDA
Gene Ontologycytosol2
GO:0009536
HDA
Gene Ontologyplastid3
GO:0005777
IBA
Gene Ontologyperoxisome1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012000 Thiamine pyrophosphate enzyme, central domain
IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain
IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding
IPR029035 DHS-like NAD/FAD-binding domain superfamily
IPR029061 Thiamin diphosphate-binding fold
IPR045025 TPP-binding domain containing protein HACL1-like
Mapman id Description
35.1 not assigned.annotated