Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.YN7FFH Arachis hypogaea HOM05D003151 ORTHO05D003723 2.6e-55 218.4 104 100.0
arahy.Tifrunner.gnm1.ann1.N198RB Arachis hypogaea HOM05D003151 ORTHO05D003723 1.7e-38 162.5 93 84.9
Rhsim03G0233200 Rhododendron simsii HOM05D003151 ORTHO05D003723 1.2e-15 86.7 75 58.7
VMungo0251G0329 Vigna mungo HOM05D003151 ORTHO05D003723 2.0e-15 85.9 75 58.7
Glyma.05G222300 Glycine max HOM05D003151 ORTHO05D003723 3.4e-15 85.1 61 68.9
Psat7g020200 Pisum sativum HOM05D003151 ORTHO05D003723 3.4e-15 85.1 69 65.2
CAN.G371.125 Capsicum annuum HOM05D003151 ORTHO05D003723 5.9e-15 84.3 85 52.9
Dinv42311 Davidia involucrata HOM05D003151 ORTHO05D003723 7.7e-15 84.0 78 57.7
Medtr8g101570 Medicago truncatula HOM05D003151 ORTHO05D003723 7.7e-15 84.0 59 66.1
vmacro06284 Vaccinium macrocarpon HOM05D003151 ORTHO05D003723 1.0e-14 83.6 75 56.0
TPR.G25452 Trifolium pratense HOM05D003151 ORTHO05D003723 1.3e-14 83.2 69 63.8
Aqoxy7G01240 Aquilegia oxysepala HOM05D003151 ORTHO05D003723 2.2e-14 82.4 82 54.9
Glyma.08G029000 Glycine max HOM05D003151 ORTHO05D003723 2.2e-14 82.4 73 57.5
CANSAT56G2773 Cannabis sativa HOM05D003151 ORTHO05D003723 3.8e-14 81.6 77 55.8
CAN.G771.2 Capsicum annuum HOM05D003151 ORTHO05D003723 3.8e-14 81.6 62 62.9
Dinv36756 Davidia involucrata HOM05D003151 ORTHO05D003723 3.8e-14 81.6 80 53.8
Nn8g38896 Nelumbo nucifera HOM05D003151 ORTHO05D003723 3.8e-14 81.6 67 61.2
CANSAT56G1065 Cannabis sativa HOM05D003151 ORTHO05D003723 5.0e-14 81.3 73 57.5
Cfa003099 Carpinus fangiana HOM05D003151 ORTHO05D003723 5.0e-14 81.3 69 59.4
Haze_25901 Corylus avellana HOM05D003151 ORTHO05D003723 8.5e-14 80.5 69 59.4
Nitab4.5_0010222g0030 Nicotiana tabacum HOM05D003151 ORTHO05D003723 8.5e-14 80.5 83 53.0
TAR383G0148 Trochodendron aralioides HOM05D003151 ORTHO05D003723 8.5e-14 80.5 60 63.3
Ciclev10008864m.g Citrus clementina HOM05D003151 ORTHO05D003723 1.1e-13 80.1 58 63.8
Eucgr.C00902 Eucalyptus grandis HOM05D003151 ORTHO05D003723 1.4e-13 79.7 60 65.0
Lj2g0012329 Lotus japonicus HOM05D003151 ORTHO05D003723 1.4e-13 79.7 69 56.5
Peaxi162Scf01318g00001 Petunia axillaris HOM05D003151 ORTHO05D003723 1.4e-13 79.7 81 51.9
Lj7P674T24 Lonicera japonica HOM05D003151 ORTHO05D003723 1.9e-13 79.3 72 56.9
Peaxi162Scf00354g00026 Petunia axillaris HOM05D003151 ORTHO05D003723 1.9e-13 79.3 90 51.1
CSS0011012 Camellia sinensis var. sinensis HOM05D003151 ORTHO05D003723 2.5e-13 79.0 77 53.2
CSS0013498 Camellia sinensis var. sinensis HOM05D003151 ORTHO05D003723 2.5e-13 79.0 77 53.2
Cpa.g.c31168 Carica papaya HOM05D003151 ORTHO05D003723 2.5e-13 79.0 58 63.8
Ca_17403_v3 Cicer arietinum L. HOM05D003151 ORTHO05D003723 2.5e-13 79.0 58 65.5
COL.COLO4_18213 Corchorus olitorius HOM05D003151 ORTHO05D003723 2.5e-13 79.0 68 58.8
THA.LOC104803976 Tarenaya hassleriana HOM05D003151 ORTHO05D003723 2.5e-13 79.0 72 54.2
Prupe.7G211600 Prunus persica HOM05D003151 ORTHO05D003723 4.2e-13 78.2 57 63.2
Thecc.09G091100 Theobroma cacao HOM05D003151 ORTHO05D003723 4.2e-13 78.2 69 58.0
Nn3g21857 Nelumbo nucifera HOM05D003151 ORTHO05D003723 5.5e-13 77.8 67 58.2
ECA234G2307 Erigeron canadensis HOM05D003151 ORTHO05D003723 7.2e-13 77.4 85 50.6
Gohir.D13G199300 Gossypium hirsutum HOM05D003151 ORTHO05D003723 7.2e-13 77.4 60 65.0
SalBow6G4675 Salvia bowleyana HOM05D003151 ORTHO05D003723 7.2e-13 77.4 68 55.9
Hma1.2p1_0800F.1_g220060 Hydrangea macrophylla HOM05D003151 ORTHO05D003723 9.4e-13 77.0 82 51.2
Manes.01G223600 Manihot esculenta HOM05D003151 ORTHO05D003723 9.4e-13 77.0 83 51.8
Psat1g050280 Pisum sativum HOM05D003151 ORTHO05D003723 9.4e-13 77.0 73 56.2
AUR62033993 Chenopodium quinoa HOM05D003151 ORTHO05D003723 1.2e-12 76.6 100 48.0
Dinv32123 Davidia involucrata HOM05D003151 ORTHO05D003723 1.2e-12 76.6 80 51.2
Gohir.A13G193500 Gossypium hirsutum HOM05D003151 ORTHO05D003723 1.2e-12 76.6 60 65.0
Manes.05G000800 Manihot esculenta HOM05D003151 ORTHO05D003723 1.2e-12 76.6 79 57.0
Nitab4.5_0006935g0010 Nicotiana tabacum HOM05D003151 ORTHO05D003723 1.2e-12 76.6 96 50.0
MD02G1076800 Malus domestica HOM05D003151 ORTHO05D003723 1.6e-12 76.3 57 63.2
MD15G1205500 Malus domestica HOM05D003151 ORTHO05D003723 1.6e-12 76.3 81 51.9
Phvul.002G304000 Phaseolus vulgaris HOM05D003151 ORTHO05D003723 1.6e-12 76.3 74 55.4
Sp7g27430 Schrenkiella parvula HOM05D003151 ORTHO05D003723 1.6e-12 76.3 72 55.6
TAR626G1007 Trochodendron aralioides HOM05D003151 ORTHO05D003723 1.6e-12 76.3 85 50.6
Actinidia25258 Actinidia chinensis HOM05D003151 ORTHO05D003723 2.1e-12 75.9 83 50.6
Duzib187G1696 Durio zibethinus HOM05D003151 ORTHO05D003723 2.1e-12 75.9 69 55.1
Gorai.013G228000 Gossypium raimondii HOM05D003151 ORTHO05D003723 2.1e-12 75.9 60 63.3
Lj4g0006501 Lotus japonicus HOM05D003151 ORTHO05D003723 2.1e-12 75.9 85 50.6
TWI32G1006 Tripterygium wilfordii HOM05D003151 ORTHO05D003723 2.1e-12 75.9 67 55.2
TWI34G0516 Tripterygium wilfordii HOM05D003151 ORTHO05D003723 2.1e-12 75.9 72 56.9
BcaNung00481 Brassica carinata HOM05D003151 ORTHO05D003723 2.7e-12 75.5 59 61.0
C07p57040 Brassica napus HOM05D003151 ORTHO05D003723 2.7e-12 75.5 59 61.0
BolC7t46173H Brassica oleracea HOM05D003151 ORTHO05D003723 2.7e-12 75.5 59 61.0
Duzib168G0375 Durio zibethinus HOM05D003151 ORTHO05D003723 2.7e-12 75.5 69 55.1
Thhalv10002058m.g Eutrema salsugineum HOM05D003151 ORTHO05D003723 2.7e-12 75.5 65 58.5
Thhalv10023108m.g Eutrema salsugineum HOM05D003151 ORTHO05D003723 2.7e-12 75.5 65 58.5
Ca_25622_v3 Cicer arietinum L. HOM05D003151 ORTHO05D003723 3.6e-12 75.1 57 64.9
Sed0000540 Sechium edule HOM05D003151 ORTHO05D003723 3.6e-12 75.1 60 60.0
SGA_v2.0_scaffold62G21599 Striga asiatica HOM05D003151 ORTHO05D003723 3.6e-12 75.1 56 64.3
TPR.G35502 Trifolium pratense HOM05D003151 ORTHO05D003723 3.6e-12 75.1 79 50.6
AUR62027484 Chenopodium quinoa HOM05D003151 ORTHO05D003723 4.6e-12 74.7 57 64.9
ClCG03G015690 Citrullus lanatus HOM05D003151 ORTHO05D003723 4.6e-12 74.7 78 51.3
MSTRG.17772 Avicennia marina HOM05D003151 ORTHO05D003723 6.1e-12 74.3 62 58.1
A03p59000 Brassica napus HOM05D003151 ORTHO05D003723 6.1e-12 74.3 83 50.6
DCAR_024687 Daucus carota HOM05D003151 ORTHO05D003723 6.1e-12 74.3 65 58.5
Sabra06G0119300 Salix brachista HOM05D003151 ORTHO05D003723 6.1e-12 74.3 65 55.4
Solyc07g021750.1 Solanum lycopersicum HOM05D003151 ORTHO05D003723 6.1e-12 74.3 63 55.6
THA.LOC104801882 Tarenaya hassleriana HOM05D003151 ORTHO05D003723 6.1e-12 74.3 72 55.6
Aa31LG8G16580 Aethionema arabicum HOM05D003151 ORTHO05D003723 7.9e-12 73.9 65 55.4
BraA03t14959Z Brassica rapa HOM05D003151 ORTHO05D003723 7.9e-12 73.9 83 50.6
CiPaw.03G217400 Carya illinoinensis HOM05D003151 ORTHO05D003723 7.9e-12 73.9 58 63.8
MELO3C015459.2 Cucumis melo HOM05D003151 ORTHO05D003723 7.9e-12 73.9 78 51.3
CsaV3_1G040320 Cucumis sativus L. HOM05D003151 ORTHO05D003723 7.9e-12 73.9 78 51.3
Lalb_Chr24g0393781 Lupinus albus HOM05D003151 ORTHO05D003723 7.9e-12 73.9 49 69.4
Sp7g27420 Schrenkiella parvula HOM05D003151 ORTHO05D003723 7.9e-12 73.9 75 52.0
MSTRG.6051 Avicennia marina HOM05D003151 ORTHO05D003723 1.0e-11 73.6 56 60.7
CARHR237490 Cardamine hirsuta HOM05D003151 ORTHO05D003723 1.0e-11 73.6 59 59.3
Oeu006976.1 Olea europaea HOM05D003151 ORTHO05D003723 1.0e-11 73.6 79 49.4
Sopen07g011620 Solanum pennellii HOM05D003151 ORTHO05D003723 1.0e-11 73.6 92 45.7
PGSC0003DMG400007756 Solanum tuberosum HOM05D003151 ORTHO05D003723 1.0e-11 73.6 91 46.2
MSTRG.19521 Avicennia marina HOM05D003151 ORTHO05D003723 1.4e-11 73.2 85 49.4
Carub.0003s3386 Capsella rubella HOM05D003151 ORTHO05D003723 1.4e-11 73.2 69 56.5
HanXRQChr10g0319261 Helianthus annuus HOM05D003151 ORTHO05D003723 1.4e-11 73.2 56 64.3
Lalb_Chr05g0223631 Lupinus albus HOM05D003151 ORTHO05D003723 1.4e-11 73.2 59 62.7
Potri.006G150600 Populus trichocarpa HOM05D003151 ORTHO05D003723 1.4e-11 73.2 65 53.8
arahy.Tifrunner.gnm1.ann1.ME19SE Arachis hypogaea HOM05D003151 ORTHO05D003723 1.8e-11 72.8 57 71.9
Gorai.004G284000 Gossypium raimondii HOM05D003151 ORTHO05D003723 1.8e-11 72.8 60 58.3
Lsat_1_v5_gn_7_37501 Lactuca sativa HOM05D003151 ORTHO05D003723 1.8e-11 72.8 84 47.6
Oeu034043.1 Olea europaea HOM05D003151 ORTHO05D003723 1.8e-11 72.8 60 60.0
GSVIVG01015216001 Vitis vinifera HOM05D003151 ORTHO05D003723 1.8e-11 72.8 53 64.2
Cc06_g11280 Coffea canephora HOM05D003151 ORTHO05D003723 2.3e-11 72.4 55 63.6
Gohir.D05G030900 Gossypium hirsutum HOM05D003151 ORTHO05D003723 2.3e-11 72.4 69 55.1
Gorai.009G031100 Gossypium raimondii HOM05D003151 ORTHO05D003723 2.3e-11 72.4 69 55.1
Lsat_1_v5_gn_5_145481 Lactuca sativa HOM05D003151 ORTHO05D003723 2.3e-11 72.4 60 58.3
Ah.14g085250 Amaranthus hybridus HOM05D003151 ORTHO05D003723 3.0e-11 72.0 71 52.1
BcaC06g36599 Brassica carinata HOM05D003151 ORTHO05D003723 3.0e-11 72.0 83 53.0
BcaC06g36600 Brassica carinata HOM05D003151 ORTHO05D003723 3.0e-11 72.0 83 53.0
C07p02310 Brassica napus HOM05D003151 ORTHO05D003723 3.0e-11 72.0 83 53.0
BolC7t40640H Brassica oleracea HOM05D003151 ORTHO05D003723 3.0e-11 72.0 83 53.0
Gohir.A08G245300 Gossypium hirsutum HOM05D003151 ORTHO05D003723 3.0e-11 72.0 72 54.2
Gohir.A05G029400 Gossypium hirsutum HOM05D003151 ORTHO05D003723 3.9e-11 71.6 69 55.1
Potri.018G066400 Populus trichocarpa HOM05D003151 ORTHO05D003723 3.9e-11 71.6 58 58.6
PGR142G4167 Punica granatum HOM05D003151 ORTHO05D003723 3.9e-11 71.6 65 56.9
unitig_27.g24726 Utricularia gibba HOM05D003151 ORTHO05D003723 3.9e-11 71.6 57 59.6
BcaB03g16745 Brassica carinata HOM05D003151 ORTHO05D003723 5.1e-11 71.2 82 52.4
Nn6g35445 Nelumbo nucifera HOM05D003151 ORTHO05D003723 5.1e-11 71.2 83 44.6
PSO832G3392 Papaver somniferum HOM05D003151 ORTHO05D003723 5.1e-11 71.2 71 54.9
Sed0008525 Sechium edule HOM05D003151 ORTHO05D003723 5.1e-11 71.2 68 52.9
Aa31LG2G20920 Aethionema arabicum HOM05D003151 ORTHO05D003723 6.7e-11 70.9 59 57.6
AL3G48670 Arabidopsis lyrata HOM05D003151 ORTHO05D003723 6.7e-11 70.9 66 53.0
AT2G19570 Arabidopsis thaliana HOM05D003151 ORTHO05D003723 6.7e-11 70.9 83 48.2
A07p01170 Brassica napus HOM05D003151 ORTHO05D003723 6.7e-11 70.9 57 61.4
Sp3g32950 Schrenkiella parvula HOM05D003151 ORTHO05D003723 6.7e-11 70.9 59 59.3
PSO063G1447 Papaver somniferum HOM05D003151 ORTHO05D003723 8.8e-11 70.5 75 53.3
Sc08g0008410 Simmondsia chinensis HOM05D003151 ORTHO05D003723 8.8e-11 70.5 78 48.7
Medtr6g092660 Medicago truncatula HOM05D003151 ORTHO05D003723 1.1e-10 70.1 56 62.5
QL02p062866 Quercus lobata HOM05D003151 ORTHO05D003723 1.1e-10 70.1 58 55.2
CARHR110010 Cardamine hirsuta HOM05D003151 ORTHO05D003723 1.5e-10 69.7 59 57.6
Nn8g39131 Nelumbo nucifera HOM05D003151 ORTHO05D003723 1.5e-10 69.7 59 55.9
FvH4_1g07230 Fragaria vesca HOM05D003151 ORTHO05D003723 2.0e-10 69.3 67 55.2
RcHm_v2.0_Chr2g0093131 Rosa chinensis HOM05D003151 ORTHO05D003723 2.0e-10 69.3 76 53.9
Migut.J00599 Erythranthe guttata HOM05D003151 ORTHO05D003723 3.3e-10 68.6 79 46.8
Glyma.07G129300 Glycine max HOM05D003151 ORTHO05D003723 3.3e-10 68.6 56 60.7
Phvul.004G170900 Phaseolus vulgaris HOM05D003151 ORTHO05D003723 3.3e-10 68.6 56 58.9
CDE05G2742 Ceratophyllum demersum HOM05D003151 ORTHO05D003723 4.3e-10 68.2 75 46.7
ATR0716G029 Amborella trichopoda HOM05D003151 ORTHO05D003723 7.4e-10 67.4 101 40.6
Sabra18G0058900 Salix brachista HOM05D003151 ORTHO05D003723 7.4e-10 67.4 58 56.9
SabraUnG0005300 Salix brachista HOM05D003151 ORTHO05D003723 7.4e-10 67.4 58 56.9
EL10Ac8g19236 Beta vulgaris HOM05D003151 ORTHO05D003723 9.7e-10 67.0 84 42.9
CDE05G0195 Ceratophyllum demersum HOM05D003151 ORTHO05D003723 9.7e-10 67.0 75 45.3
FAN19G2283 Fragaria x ananassa HOM05D003151 ORTHO05D003723 1.3e-09 66.6 67 53.7
FAN26G1922 Fragaria x ananassa HOM05D003151 ORTHO05D003723 1.3e-09 66.6 67 53.7
FAN26G3264 Fragaria x ananassa HOM05D003151 ORTHO05D003723 1.3e-09 66.6 67 53.7
VMungo0464G1479 Vigna mungo HOM05D003151 ORTHO05D003723 1.3e-09 66.6 56 58.9
BolC7t46172H Brassica oleracea HOM05D003151 ORTHO05D003723 2.2e-09 65.9 75 48.0
FAN28G1682 Fragaria x ananassa HOM05D003151 ORTHO05D003723 2.2e-09 65.9 75 48.0
ECA240G2674 Erigeron canadensis HOM05D003151 ORTHO05D003723 6.3e-09 64.3 62 51.6
Nn4g25536 Nelumbo nucifera HOM05D003151 ORTHO05D003723 8.2e-09 63.9 98 41.8
AL7G22750 Arabidopsis lyrata HOM05D003151 ORTHO05D003723 1.4e-08 63.2 56 57.1
SMO367G0845 Selaginella moellendorffii HOM05D003151 ORTHO05D003723 1.4e-08 63.2 61 50.8
AL7G22720 Arabidopsis lyrata HOM05D003151 ORTHO05D003723 1.8e-08 62.8 56 57.1
CARHR237400 Cardamine hirsuta HOM05D003151 ORTHO05D003723 4.1e-08 61.6 78 46.2
Thhalv10026995m.g Eutrema salsugineum HOM05D003151 ORTHO05D003723 4.1e-08 61.6 56 58.9
AT4G29620 Arabidopsis thaliana HOM05D003151 ORTHO05D003723 5.3e-08 61.2 76 48.7
AL7G22780 Arabidopsis lyrata HOM05D003151 ORTHO05D003723 9.1e-08 60.5 76 48.7
AT4G29600 Arabidopsis thaliana HOM05D003151 ORTHO05D003723 9.1e-08 60.5 60 55.0
BraA03t14958Z Brassica rapa HOM05D003151 ORTHO05D003723 9.1e-08 60.5 75 46.7
AL7G22810 Arabidopsis lyrata HOM05D003151 ORTHO05D003723 1.2e-07 60.1 65 52.3
C07p56970 Brassica napus HOM05D003151 ORTHO05D003723 1.2e-07 60.1 75 46.7
SEGI_35809 Sequoiadendron giganteum HOM05D003151 ORTHO05D003723 1.2e-07 60.1 80 42.5
AT4G29610 Arabidopsis thaliana HOM05D003151 ORTHO05D003723 1.5e-07 59.7 60 53.3
A03p58990 Brassica napus HOM05D003151 ORTHO05D003723 1.5e-07 59.7 75 45.3
Gohir.D08G266301 Gossypium hirsutum HOM05D003151 ORTHO05D003723 2.0e-07 59.3 45 62.2
AagrBONN_evm.TU.Sc2ySwM_368.3134 Anthoceros agrestis HOM05D003151 ORTHO05D003723 2.6e-07 58.9 67 41.8
Carub.0007s1096 Capsella rubella HOM05D003151 ORTHO05D003723 2.6e-07 58.9 71 47.9
AT4G29570 Arabidopsis thaliana HOM05D003151 ORTHO05D003723 3.4e-07 58.5 52 57.7
AL7G22770 Arabidopsis lyrata HOM05D003151 ORTHO05D003723 4.5e-07 58.2 71 49.3
Carub.0007s1094 Capsella rubella HOM05D003151 ORTHO05D003723 4.5e-07 58.2 55 56.4
Zm00001eb155060 Zea mays HOM05D003151 ORTHO05D003723 5.9e-07 57.8 59 45.8
C07p57000 Brassica napus HOM05D003151 ORTHO05D003723 7.7e-07 57.4 76 44.7
Zm00001eb361370 Zea mays HOM05D003151 ORTHO05D003723 7.7e-07 57.4 59 45.8
CARHR237410 Cardamine hirsuta HOM05D003151 ORTHO05D003723 1.7e-06 56.2 62 51.6
Mapoly0047s0014 Marchantia polymorpha HOM05D003151 ORTHO05D003723 2.2e-06 55.8 57 49.1
Pp3c11_5250 Physcomitrium patens HOM05D003151 ORTHO05D003723 2.9e-06 55.5 67 46.3
AL7G22740 Arabidopsis lyrata HOM05D003151 ORTHO05D003723 3.8e-06 55.1 55 54.5
CBR_g7991 Chara braunii HOM05D003151 ORTHO05D003723 3.8e-06 55.1 60 41.7
Os01g0712700 Oryza sativa ssp. japonica HOM05D003151 ORTHO05D003723 3.8e-06 55.1 65 43.1
Pp3c1_4510 Physcomitrium patens HOM05D003151 ORTHO05D003723 3.8e-06 55.1 57 49.1
HanXRQChr03g0060791 Helianthus annuus HOM05D003151 ORTHO05D003723 5.0e-06 54.7 41 61.0
Pp3c7_23670 Physcomitrium patens HOM05D003151 ORTHO05D003723 8.5e-06 53.9 56 50.0


User provided reference genes

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