Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.YD6KBQ Arachis hypogaea HOM05D006561 ORTHO05D008097 3.3e-110 401.7 204 100.0
arahy.Tifrunner.gnm1.ann1.RM2LTG Arachis hypogaea HOM05D006561 ORTHO05D008097 2.5e-102 375.6 242 82.2
VMungo1080G0633 Vigna mungo HOM05D006561 ORTHO05D008097 6.2e-69 264.6 249 58.6
Phvul.005G029100 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 9.0e-68 260.8 247 57.1
Glyma.13G273500 Glycine max HOM05D006561 ORTHO05D008097 6.4e-66 254.6 238 57.1
Lalb_Chr25g0286221 Lupinus albus HOM05D006561 ORTHO05D008097 9.3e-65 250.8 250 57.2
Ca_03532_v3 Cicer arietinum L. HOM05D006561 ORTHO05D008097 9.0e-60 234.2 246 54.9
Psat0s1402g0080 Pisum sativum HOM05D006561 ORTHO05D008097 9.9e-59 230.7 246 53.3
Phvul.005G075200 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 5.5e-57 224.9 175 63.4
TPR.G7947 Trifolium pratense HOM05D006561 ORTHO05D008097 9.3e-57 224.2 246 51.2
TAR627G0129 Trochodendron aralioides HOM05D006561 ORTHO05D008097 9.3e-57 224.2 254 50.4
Potri.011G141200 Populus trichocarpa HOM05D006561 ORTHO05D008097 2.1e-56 223.0 237 50.6
Oeu005397.1 Olea europaea HOM05D006561 ORTHO05D008097 1.0e-55 220.7 240 50.0
Dinv14944 Davidia involucrata HOM05D006561 ORTHO05D008097 1.3e-55 220.3 249 51.0
CSS0025681 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 1.8e-55 219.9 251 50.2
CSS0029173 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 1.8e-55 219.9 251 50.2
Hma1.2p1_0416F.1_g148410 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 1.8e-55 219.9 245 48.2
TWI38G0530 Tripterygium wilfordii HOM05D006561 ORTHO05D008097 3.0e-55 219.2 240 51.2
Sabra11G0126800 Salix brachista HOM05D006561 ORTHO05D008097 6.7e-55 218.0 237 49.4
MSTRG.15242 Avicennia marina HOM05D006561 ORTHO05D008097 1.1e-54 217.2 244 50.4
Atru.chr2.2390 Acer truncatum HOM05D006561 ORTHO05D008097 1.5e-54 216.9 249 49.0
Migut.M00775 Erythranthe guttata HOM05D006561 ORTHO05D008097 5.6e-54 214.9 231 51.9
Cfa020616 Carpinus fangiana HOM05D006561 ORTHO05D008097 7.4e-54 214.5 248 48.0
Medtr2g078640 Medicago truncatula HOM05D006561 ORTHO05D008097 7.4e-54 214.5 245 48.6
Aqoxy1G02303 Aquilegia oxysepala HOM05D006561 ORTHO05D008097 1.3e-53 213.8 233 48.5
Ah.06g184730 Amaranthus hybridus HOM05D006561 ORTHO05D008097 1.6e-53 213.4 200 56.5
Haze_09389 Corylus avellana HOM05D006561 ORTHO05D008097 4.8e-53 211.8 248 47.6
Rhsim06G0203200 Rhododendron simsii HOM05D006561 ORTHO05D008097 4.8e-53 211.8 239 47.3
Hund17607 Selenicereus undatus HOM05D006561 ORTHO05D008097 4.8e-53 211.8 244 48.4
EL10Ac4g08253 Beta vulgaris HOM05D006561 ORTHO05D008097 8.1e-53 211.1 244 47.5
Manes.03G104900 Manihot esculenta HOM05D006561 ORTHO05D008097 1.4e-52 210.3 249 47.8
CiPaw.11G166900 Carya illinoinensis HOM05D006561 ORTHO05D008097 5.3e-52 208.4 238 47.1
ECA234G0004 Erigeron canadensis HOM05D006561 ORTHO05D008097 1.2e-51 207.2 243 48.1
Nitab4.5_0000246g0010 Nicotiana tabacum HOM05D006561 ORTHO05D008097 1.2e-51 207.2 230 48.7
Eucgr.F01175 Eucalyptus grandis HOM05D006561 ORTHO05D008097 1.5e-51 206.8 235 48.5
Nitab4.5_0002019g0020 Nicotiana tabacum HOM05D006561 ORTHO05D008097 2.6e-51 206.1 230 48.7
Sc16g0007290 Simmondsia chinensis HOM05D006561 ORTHO05D008097 2.6e-51 206.1 240 47.5
ClCG11G017750 Citrullus lanatus HOM05D006561 ORTHO05D008097 4.5e-51 205.3 241 46.1
PGSC0003DMG401012439 Solanum tuberosum HOM05D006561 ORTHO05D008097 1.3e-50 203.8 229 47.6
Cpa.g.sc80.2 Carica papaya HOM05D006561 ORTHO05D008097 1.7e-50 203.4 235 48.5
Sopen07g031000 Solanum pennellii HOM05D006561 ORTHO05D008097 2.2e-50 203.0 230 47.8
Nn1g06395 Nelumbo nucifera HOM05D006561 ORTHO05D008097 2.9e-50 202.6 250 47.6
Sed0026268 Sechium edule HOM05D006561 ORTHO05D008097 2.9e-50 202.6 245 44.5
CsaV3_4G033370 Cucumis sativus L. HOM05D006561 ORTHO05D008097 4.9e-50 201.8 235 46.4
MBI02_g25404_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 4.9e-50 201.8 227 51.5
Solyc07g062780.3 Solanum lycopersicum HOM05D006561 ORTHO05D008097 4.9e-50 201.8 230 47.4
Ciclev10009269m.g Citrus clementina HOM05D006561 ORTHO05D008097 1.4e-49 200.3 238 47.5
DCAR_017121 Daucus carota HOM05D006561 ORTHO05D008097 3.2e-49 199.1 246 44.7
HanXRQChr10g0302511 Helianthus annuus HOM05D006561 ORTHO05D008097 5.5e-49 198.4 252 46.8
GSVIVG01014276001 Vitis vinifera HOM05D006561 ORTHO05D008097 5.5e-49 198.4 165 59.4
MELO3C025617.2 Cucumis melo HOM05D006561 ORTHO05D008097 7.1e-49 198.0 243 45.3
Peaxi162Scf00069g01837 Petunia axillaris HOM05D006561 ORTHO05D008097 7.1e-49 198.0 238 46.6
Lsat_1_v5_gn_5_127501 Lactuca sativa HOM05D006561 ORTHO05D008097 9.3e-49 197.6 245 44.9
PGR083G2053 Punica granatum HOM05D006561 ORTHO05D008097 9.3e-49 197.6 251 44.2
Aa31LG8G2350 Aethionema arabicum HOM05D006724 ORTHO05D008514 1.2e-48 197.2 242 46.3
CARHR090130 Cardamine hirsuta HOM05D006561 ORTHO05D008097 2.1e-48 196.4 248 45.2
Carub.0003s1480 Capsella rubella HOM05D006561 ORTHO05D008097 2.7e-48 196.1 247 44.9
Thhalv10021394m.g Eutrema salsugineum HOM05D006561 ORTHO05D008097 3.5e-48 195.7 248 46.0
THA.LOC104818093 Tarenaya hassleriana HOM05D006561 ORTHO05D008097 3.5e-48 195.7 249 47.4
MD03G1235300 Malus domestica HOM05D006561 ORTHO05D008097 4.6e-48 195.3 246 46.3
Prupe.4G174000 Prunus persica HOM05D006561 ORTHO05D008097 4.6e-48 195.3 165 58.2
C05p52080 Brassica napus HOM05D006561 ORTHO05D008097 6.0e-48 194.9 248 44.8
BolC5t33893H Brassica oleracea HOM05D006561 ORTHO05D008097 6.0e-48 194.9 248 44.8
SHI39306 Sapria himalayana HOM05D006561 ORTHO05D008097 6.0e-48 194.9 238 45.0
SHI39545 Sapria himalayana HOM05D006561 ORTHO05D008097 6.0e-48 194.9 238 45.0
Cc05_g11670 Coffea canephora HOM05D006561 ORTHO05D008097 1.0e-47 194.1 233 45.1
A05p34300 Brassica napus HOM05D006561 ORTHO05D008097 1.3e-47 193.7 248 44.4
Gohir.D01G047500 Gossypium hirsutum HOM05D006561 ORTHO05D008097 1.8e-47 193.4 248 46.0
Gorai.002G067000 Gossypium raimondii HOM05D006561 ORTHO05D008097 1.8e-47 193.4 248 46.0
RcHm_v2.0_Chr5g0032331 Rosa chinensis HOM05D006561 ORTHO05D008097 1.8e-47 193.4 253 42.7
AL3G27540 Arabidopsis lyrata HOM05D006561 ORTHO05D008097 2.3e-47 193.0 247 44.9
BcaB06g29539 Brassica carinata HOM05D006561 ORTHO05D008097 2.3e-47 193.0 248 44.4
Thecc.07G098700 Theobroma cacao HOM05D006561 ORTHO05D008097 2.3e-47 193.0 261 42.9
Gohir.A01G061000 Gossypium hirsutum HOM05D006561 ORTHO05D008097 3.0e-47 192.6 248 45.6
AUR62019482 Chenopodium quinoa HOM05D006561 ORTHO05D008097 3.9e-47 192.2 231 46.3
Sp3g13360 Schrenkiella parvula HOM05D006561 ORTHO05D008097 3.9e-47 192.2 248 44.8
FvH4_3g19260 Fragaria vesca HOM05D006561 ORTHO05D008097 6.7e-47 191.4 242 43.4
FAN11G0360 Fragaria x ananassa HOM05D006561 ORTHO05D008097 6.7e-47 191.4 242 43.4
Zm00001eb295840 Zea mays HOM05D006561 ORTHO05D008097 6.7e-47 191.4 228 47.4
BraA05t22251Z Brassica rapa HOM05D006561 ORTHO05D008097 8.7e-47 191.0 255 43.1
FAN25G3572 Fragaria x ananassa HOM05D006561 ORTHO05D008097 8.7e-47 191.0 242 43.8
unitig_747.g21579 Utricularia gibba HOM05D006561 ORTHO05D008097 8.7e-47 191.0 240 45.0
AT3G15150 Arabidopsis thaliana HOM05D006561 ORTHO05D008097 1.1e-46 190.7 248 44.0
CAN.G162.30 Capsicum annuum HOM05D006561 ORTHO05D008097 1.5e-46 190.3 158 58.2
PSO675G8981 Papaver somniferum HOM05D006561 ORTHO05D008097 1.5e-46 190.3 240 43.3
AUR62036152 Chenopodium quinoa HOM05D006561 ORTHO05D008097 1.9e-46 189.9 243 44.9
arahy.Tifrunner.gnm1.ann1.YKS4T6 Arachis hypogaea HOM05D006561 ORTHO05D008097 2.5e-46 189.5 131 77.1
Lj3g0026269 Lotus japonicus HOM05D006561 ORTHO05D008097 7.4e-46 188.0 202 53.0
Duzib213G1006 Durio zibethinus HOM05D006561 ORTHO05D008097 2.8e-45 186.0 223 47.1
ATR0602G252 Amborella trichopoda HOM05D006561 ORTHO05D008097 3.7e-45 185.7 244 44.3
MBI02_g44100_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 3.1e-44 182.6 194 52.1
CANSAT35G0349 Cannabis sativa HOM05D006561 ORTHO05D008097 2.2e-42 176.4 251 42.2
HPP92_024567 Vanilla planifolia HOM05D006561 ORTHO05D008097 1.1e-41 174.1 288 39.6
QL08p023698 Quercus lobata HOM05D006561 ORTHO05D008097 2.1e-40 169.9 119 68.1
Lj8A153G39 Lonicera japonica HOM05D006561 ORTHO05D008097 4.6e-40 168.7 192 45.3
vmacro11896 Vaccinium macrocarpon HOM05D006561 ORTHO05D008097 1.0e-39 167.5 315 34.0
SGA_v2.0_scaffold34G13795 Striga asiatica HOM05D006561 ORTHO05D008097 3.0e-39 166.0 190 45.8
Actinidia07498 Actinidia chinensis HOM05D006561 ORTHO05D008097 1.6e-37 160.2 174 54.0
MD11G1255800 Malus domestica HOM05D006561 ORTHO05D008097 3.2e-33 146.0 186 43.5
FAN16G3278 Fragaria x ananassa HOM05D006561 ORTHO05D008097 1.6e-32 143.7 128 54.7
Actinidia12544 Actinidia chinensis HOM05D006561 ORTHO05D008097 2.3e-31 139.8 111 61.3
Pp3c22_18560 Physcomitrium patens HOM05D006561 ORTHO05D008097 1.3e-29 134.0 171 43.3
Mapoly0096s0048 Marchantia polymorpha HOM05D006561 ORTHO05D008097 1.5e-27 127.1 181 38.7
SMO265G0056 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 3.4e-27 125.9 135 47.4
SMO143G0268 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 2.2e-26 123.2 159 42.1
AagrBONN_evm.TU.Sc2ySwM_228.4556 Anthoceros agrestis HOM05D006561 ORTHO05D008097 6.5e-26 121.7 208 34.6
PSO541G4753 Papaver somniferum HOM05D006561 ORTHO05D008097 1.6e-24 117.1 169 38.5
CBR_g861 Chara braunii HOM05D006561 ORTHO05D008097 9.7e-22 107.8 219 31.1
Nn5g27383 Nelumbo nucifera HOM05D006561 ORTHO05D008097 3.5e-19 99.4 97 52.6
PRCOL_00000682 Prasinoderma coloniale HOM05D006561 ORTHO05D008097 5.7e-14 82.0 174 31.6
Pp3c23_10880 Physcomitrium patens HOM05D006561 ORTHO05D008097 2.4e-12 76.6 99 35.4
Mapoly0066s0041 Marchantia polymorpha HOM05D006561 ORTHO05D008097 4.5e-11 72.4 98 35.7
Pp3c20_12000 Physcomitrium patens HOM05D006561 ORTHO05D008097 1.3e-10 70.9 93 38.7
CDE08G0579 Ceratophyllum demersum HOM05D006561 ORTHO05D008097 1.7e-10 70.5 140 30.7
Haze_09400 Corylus avellana HOM05D006561 ORTHO05D008097 1.2e-08 64.3 127 34.6
QL08p023707 Quercus lobata HOM05D006561 ORTHO05D008097 6.1e-08 62.0 118 31.4
Hma1.2p1_0416F.1_g148400 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 3.0e-07 59.7 157 26.1
Haze_09393 Corylus avellana HOM05D006561 ORTHO05D008097 1.2e-06 57.8 67 47.8
Pp3c23_16570 Physcomitrium patens HOM05D006561 ORTHO05D309072 2.0e-06 57.0 59 40.7


User provided reference genes

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