Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.V95A4R Arachis hypogaea HOM05D003404 ORTHO05D004052 9.1e-145 516.9 268 100.0
arahy.Tifrunner.gnm1.ann1.F0HWYS Arachis hypogaea HOM05D003404 ORTHO05D004052 6.4e-82 308.1 309 60.5
arahy.Tifrunner.gnm1.ann1.TT7XH0 Arachis hypogaea HOM05D003404 ORTHO05D004052 1.9e-81 306.6 309 60.2
Lalb_Chr18g0061171 Lupinus albus HOM05D003404 ORTHO05D004052 8.7e-79 297.7 309 57.9
GSVIVG01023143001 Vitis vinifera HOM05D003404 ORTHO05D004052 1.9e-78 296.6 309 57.3
QL02p103380 Quercus lobata HOM05D003404 ORTHO05D004052 7.4e-78 294.7 309 57.0
Glyma.17G002000 Glycine max HOM05D003404 ORTHO05D004052 1.6e-77 293.5 309 57.6
Manes.07G030800 Manihot esculenta HOM05D003404 ORTHO05D004052 1.6e-77 293.5 309 56.6
Phvul.003G076300 Phaseolus vulgaris HOM05D003404 ORTHO05D004052 3.7e-77 292.4 309 57.9
Ciclev10000063m.g Citrus clementina HOM05D003404 ORTHO05D004052 4.8e-77 292.0 309 55.7
Glyma.07G272400 Glycine max HOM05D003404 ORTHO05D004052 4.8e-77 292.0 309 57.9
Lalb_Chr15g0090861 Lupinus albus HOM05D003404 ORTHO05D004052 4.8e-77 292.0 309 57.3
VMungo1215G2990 Vigna mungo HOM05D003404 ORTHO05D004052 4.8e-77 292.0 309 57.9
Haze_09982 Corylus avellana HOM05D003404 ORTHO05D004052 8.1e-77 291.2 309 56.3
Lsat_1_v5_gn_9_83361 Lactuca sativa HOM05D003404 ORTHO05D004052 1.4e-76 290.4 309 56.3
Cfa004441 Carpinus fangiana HOM05D003404 ORTHO05D004052 2.4e-76 289.7 309 56.0
Dinv29680 Davidia involucrata HOM05D003404 ORTHO05D004052 9.0e-76 287.7 309 55.0
Medtr4g134620 Medicago truncatula HOM05D003404 ORTHO05D004052 1.2e-75 287.3 309 56.6
TPR.G6014 Trifolium pratense HOM05D003404 ORTHO05D004052 1.2e-75 287.3 309 57.0
RcHm_v2.0_Chr1g0383371 Rosa chinensis HOM05D003404 ORTHO05D004052 2.0e-75 286.6 309 56.6
Thecc.06G019500 Theobroma cacao HOM05D003404 ORTHO05D004052 2.0e-75 286.6 309 56.0
Sed0011322 Sechium edule HOM05D003404 ORTHO05D004052 3.4e-75 285.8 309 56.0
CiPaw.05G001400 Carya illinoinensis HOM05D003404 ORTHO05D004052 4.5e-75 285.4 309 55.7
ClCG10G007400 Citrullus lanatus HOM05D003404 ORTHO05D004052 4.5e-75 285.4 309 56.0
HanXRQChr15g0469691 Helianthus annuus HOM05D003404 ORTHO05D004052 5.8e-75 285.0 310 56.1
ECA236G3319 Erigeron canadensis HOM05D003404 ORTHO05D004052 7.6e-75 284.6 309 55.7
Psat4g002640 Pisum sativum HOM05D003404 ORTHO05D004052 9.9e-75 284.3 309 56.3
Prupe.2G322700 Prunus persica HOM05D003404 ORTHO05D004052 9.9e-75 284.3 309 56.0
Dinv29635 Davidia involucrata HOM05D003404 ORTHO05D004052 2.2e-74 283.1 309 54.0
MELO3C016463.2 Cucumis melo HOM05D003404 ORTHO05D004052 2.9e-74 282.7 309 55.7
Actinidia26195 Actinidia chinensis HOM05D003404 ORTHO05D004052 3.8e-74 282.3 309 55.0
Duzib235G1119 Durio zibethinus HOM05D003404 ORTHO05D004052 3.8e-74 282.3 309 55.0
COL.COLO4_31122 Corchorus olitorius HOM05D003404 ORTHO05D004052 4.9e-74 282.0 309 55.3
Nn5g27178 Nelumbo nucifera HOM05D003404 ORTHO05D004052 4.9e-74 282.0 309 54.7
CANSAT21G0984 Cannabis sativa HOM05D003404 ORTHO05D004052 6.4e-74 281.6 309 56.0
Gohir.A06G144600 Gossypium hirsutum HOM05D003404 ORTHO05D004052 6.4e-74 281.6 309 56.0
Gohir.D06G150300 Gossypium hirsutum HOM05D003404 ORTHO05D004052 6.4e-74 281.6 309 56.0
Sabra01G0174500 Salix brachista HOM05D003404 ORTHO05D004052 8.4e-74 281.2 309 54.4
FvH4_7g33400 Fragaria vesca HOM05D003404 ORTHO05D004052 1.4e-73 280.4 309 56.3
FAN01G2685 Fragaria x ananassa HOM05D003404 ORTHO05D004052 1.4e-73 280.4 309 56.3
Lj5C285G4 Lonicera japonica HOM05D003404 ORTHO05D004052 1.4e-73 280.4 309 55.0
Lj4g0008829 Lotus japonicus HOM05D003404 ORTHO05D004052 1.4e-73 280.4 309 55.7
CAN.G855.55 Capsicum annuum HOM05D003404 ORTHO05D004052 1.9e-73 280.0 309 54.0
Sopen01g045420 Solanum pennellii HOM05D003404 ORTHO05D004052 2.5e-73 279.6 309 53.7
Atru.chr6.225 Acer truncatum HOM05D003404 ORTHO05D004052 3.2e-73 279.3 309 54.0
Duzib192G0569 Durio zibethinus HOM05D003404 ORTHO05D004052 7.1e-73 278.1 310 55.2
Solyc01g103010.4 Solanum lycopersicum HOM05D003404 ORTHO05D004052 7.1e-73 278.1 309 53.4
FAN03G0122 Fragaria x ananassa HOM05D003404 ORTHO05D004052 9.3e-73 277.7 309 55.7
Potri.004G229300 Populus trichocarpa HOM05D003404 ORTHO05D004052 9.3e-73 277.7 309 54.0
CSS0015679 Camellia sinensis var. sinensis HOM05D003404 ORTHO05D004052 1.2e-72 277.3 309 55.3
Potri.003G000500 Populus trichocarpa HOM05D003404 ORTHO05D004052 1.6e-72 276.9 309 54.0
EL10Ac6g13982 Beta vulgaris HOM05D003404 ORTHO05D004052 2.1e-72 276.6 309 54.0
MD01G1232300 Malus domestica HOM05D003404 ORTHO05D004052 2.1e-72 276.6 309 54.4
CsaV3_3G006660 Cucumis sativus L. HOM05D003404 ORTHO05D004052 3.5e-72 275.8 309 54.4
Aqoxy5G01845 Aquilegia oxysepala HOM05D003404 ORTHO05D004052 1.3e-71 273.9 309 53.7
TAR376G0925 Trochodendron aralioides HOM05D003404 ORTHO05D004052 1.3e-71 273.9 309 53.4
Sabra03G0000100 Salix brachista HOM05D003404 ORTHO05D004052 2.3e-71 273.1 309 53.1
Cc02_g23620 Coffea canephora HOM05D003404 ORTHO05D004052 3.9e-71 272.3 309 52.8
TWI59G0557 Tripterygium wilfordii HOM05D003404 ORTHO05D004052 3.9e-71 272.3 309 53.7
MD07G1304100 Malus domestica HOM05D003404 ORTHO05D004052 5.1e-71 271.9 309 53.7
Nitab4.5_0003247g0080 Nicotiana tabacum HOM05D003404 ORTHO05D004052 6.7e-71 271.6 318 52.2
Rhsim05G0115300 Rhododendron simsii HOM05D003404 ORTHO05D004052 8.7e-71 271.2 321 52.3
arahy.Tifrunner.gnm1.ann1.GKM8IL Arachis hypogaea HOM05D003404 ORTHO05D004052 1.1e-70 270.8 251 64.1
Migut.B00720 Erythranthe guttata HOM05D003404 ORTHO05D004052 1.9e-70 270.0 309 52.8
TWI14G1077 Tripterygium wilfordii HOM05D003404 ORTHO05D004052 1.9e-70 270.0 309 53.4
Ah.03g136760 Amaranthus hybridus HOM05D003404 ORTHO05D004052 2.5e-70 269.6 309 53.1
PSO210G7577 Papaver somniferum HOM05D003404 ORTHO05D004052 1.3e-69 267.3 309 53.1
Gorai.010G175500 Gossypium raimondii HOM05D003404 ORTHO05D004052 2.1e-69 266.5 337 51.3
DCAR_001727 Daucus carota HOM05D003404 ORTHO05D004052 2.8e-69 266.2 310 52.6
Eucgr.G00074 Eucalyptus grandis HOM05D003404 ORTHO05D004052 2.8e-69 266.2 309 53.7
MBI06_g16624_MAGBIO Magnolia biondii HOM05D003404 ORTHO05D004052 2.8e-69 266.2 309 52.8
Sc12g0008780 Simmondsia chinensis HOM05D003404 ORTHO05D004052 3.7e-69 265.8 309 53.1
AUR62042960 Chenopodium quinoa HOM05D003404 ORTHO05D004052 1.1e-68 264.2 309 52.1
vmacro19829 Vaccinium macrocarpon HOM05D003404 ORTHO05D004052 1.1e-68 264.2 244 59.8
Oeu028474.1 Olea europaea HOM05D003404 ORTHO05D004052 1.4e-68 263.8 244 60.2
MSTRG.16466 Avicennia marina HOM05D003404 ORTHO05D004052 4.0e-68 262.3 309 51.1
PGR042G3714 Punica granatum HOM05D003404 ORTHO05D004052 4.5e-67 258.8 309 52.4
unitig_27.g24934 Utricularia gibba HOM05D003404 ORTHO05D004052 7.6e-67 258.1 309 51.1
PSO761G0035 Papaver somniferum HOM05D003404 ORTHO05D004052 1.7e-66 256.9 325 50.5
SGA_v2.0_scaffold254G45235 Striga asiatica HOM05D003404 ORTHO05D004052 2.9e-66 256.1 322 50.0
ATR1089G109 Amborella trichopoda HOM05D003404 ORTHO05D004052 3.8e-66 255.8 309 50.5
HanXRQChr04g0110261 Helianthus annuus HOM05D003404 ORTHO05D004052 4.9e-66 255.4 312 53.5
THA.LOC104805135 Tarenaya hassleriana HOM05D003404 ORTHO05D004052 1.1e-65 254.2 309 50.8
AL5G11830 Arabidopsis lyrata HOM05D003404 ORTHO05D004052 1.4e-65 253.8 309 51.8
Sp2g13790 Schrenkiella parvula HOM05D003404 ORTHO05D004052 1.4e-65 253.8 309 51.5
Carub.0005s0156 Capsella rubella HOM05D003404 ORTHO05D004052 2.5e-65 253.1 309 51.5
AT2G02560 Arabidopsis thaliana HOM05D003404 ORTHO05D004052 3.2e-65 252.7 309 51.5
CARHR145090 Cardamine hirsuta HOM05D003404 ORTHO05D004052 3.2e-65 252.7 309 51.5
Thhalv10003535m.g Eutrema salsugineum HOM05D003404 ORTHO05D004052 3.2e-65 252.7 309 51.5
THA.LOC104801780 Tarenaya hassleriana HOM05D003404 ORTHO05D004052 3.2e-65 252.7 309 50.8
A06p43570 Brassica napus HOM05D003404 ORTHO05D004052 9.3e-65 251.1 309 51.1
A02p33040 Brassica napus HOM05D003404 ORTHO05D004052 1.2e-64 250.8 309 51.1
C02p50810 Brassica napus HOM05D003404 ORTHO05D004052 1.2e-64 250.8 309 51.1
BolC2t11162H Brassica oleracea HOM05D003404 ORTHO05D004052 1.2e-64 250.8 309 51.1
BraA02t08325Z Brassica rapa HOM05D003404 ORTHO05D004052 1.2e-64 250.8 309 51.1
BraA06t27242Z Brassica rapa HOM05D003404 ORTHO05D004052 1.2e-64 250.8 309 51.1
Peaxi162Scf00011g01927 Petunia axillaris HOM05D003404 ORTHO05D004052 1.2e-64 250.8 309 50.8
C07p33270 Brassica napus HOM05D003404 ORTHO05D004052 2.1e-64 250.0 309 51.1
BolC7t43839H Brassica oleracea HOM05D003404 ORTHO05D004052 2.1e-64 250.0 309 51.1
BcaB07g30328 Brassica carinata HOM05D003404 ORTHO05D004052 3.5e-64 249.2 309 50.5
BcaC03g17156 Brassica carinata HOM05D003404 ORTHO05D004052 4.6e-64 248.8 309 50.8
CDE05G1207 Ceratophyllum demersum HOM05D003404 ORTHO05D004052 3.0e-63 246.1 278 51.4
Os02g0167700 Oryza sativa ssp. japonica HOM05D003404 ORTHO05D004052 7.4e-62 241.5 308 49.4
BcaC06g31225 Brassica carinata HOM05D003404 ORTHO05D004052 9.7e-62 241.1 311 49.8
Aa31LG2G7580 Aethionema arabicum HOM05D003404 ORTHO05D004052 1.3e-61 240.7 309 49.2
Ca_13528_v3 Cicer arietinum L. HOM05D003404 ORTHO05D004052 2.8e-61 239.6 309 49.8
HPP92_001482 Vanilla planifolia HOM05D003404 ORTHO05D004052 3.6e-56 222.6 309 45.6
SHI05020 Sapria himalayana HOM05D003404 ORTHO05D004052 2.3e-55 219.9 309 45.3
arahy.Tifrunner.gnm1.ann1.4Z0G7J Arachis hypogaea HOM05D003404 ORTHO05D004052 2.0e-54 216.9 153 79.7
AUR62043067 Chenopodium quinoa HOM05D003404 ORTHO05D004052 2.4e-52 209.9 309 44.7
Nitab4.5_0007689g0020 Nicotiana tabacum HOM05D003404 ORTHO05D004052 2.4e-52 209.9 287 47.7
Zm00001eb207390 Zea mays HOM05D003404 ORTHO05D004052 5.0e-50 202.2 309 43.4
Mapoly0029s0003 Marchantia polymorpha HOM05D003404 ORTHO05D004052 1.5e-46 190.7 307 43.6
arahy.Tifrunner.gnm1.ann1.M7XV95 Arachis hypogaea HOM05D003404 ORTHO05D004052 3.1e-44 183.0 144 72.2
Pp3c4_6460 Physcomitrium patens HOM05D003404 ORTHO05D004052 5.3e-44 182.2 306 39.9
SMO364G0878 Selaginella moellendorffii HOM05D003404 ORTHO05D004052 7.0e-44 181.8 307 41.0
AagrBONN_evm.TU.Sc2ySwM_228.3869 Anthoceros agrestis HOM05D003404 ORTHO05D004052 9.1e-44 181.4 307 42.3
Pp3c8_3260 Physcomitrium patens HOM05D003404 ORTHO05D004052 9.1e-44 181.4 306 38.6
arahy.Tifrunner.gnm1.ann1.HGQ6MN Arachis hypogaea HOM05D003404 ORTHO05D004052 3.3e-38 162.9 99 87.9
CBR_g18772 Chara braunii HOM05D003404 ORTHO05D004052 5.0e-26 122.5 270 35.9
arahy.Tifrunner.gnm1.ann1.7AK1LE Arachis hypogaea HOM05D003404 ORTHO05D004052 1.1e-25 121.3 149 54.4
arahy.Tifrunner.gnm1.ann1.R2063T Arachis hypogaea HOM05D003404 ORTHO05D004052 2.2e-21 107.1 81 75.3
HPP92_012169 Vanilla planifolia HOM05D003404 ORTHO05D004052 1.5e-17 94.4 186 37.6
BcaC06g31227 Brassica carinata HOM05D003404 ORTHO05D004052 4.2e-17 92.8 312 30.8
arahy.Tifrunner.gnm1.ann1.GG9Z8N Arachis hypogaea HOM05D003404 ORTHO05D004052 2.3e-15 87.0 59 67.8
Lsat_1_v5_gn_5_51840 Lactuca sativa HOM05D000113 ORTHO05D012184 9.8e-14 81.6 71 63.4
Lsat_1_v5_gn_5_63380 Lactuca sativa HOM05D000113 ORTHO05D012184 6.3e-13 79.0 48 79.2
arahy.Tifrunner.gnm1.ann1.XY3U73 Arachis hypogaea HOM05D003404 ORTHO05D004052 2.7e-11 73.6 38 86.8
HPP92_012174 Vanilla planifolia HOM05D017293 ORTHO05D019386 2.7e-11 73.6 77 57.1
arahy.Tifrunner.gnm1.ann1.536Q9G Arachis hypogaea HOM05D003404 ORTHO05D004052 1.0e-10 71.6 36 88.9
arahy.Tifrunner.gnm1.ann1.L2Q8ZF Arachis hypogaea HOM05D003404 ORTHO05D004052 6.6e-10 68.9 77 51.9
HPP92_012173 Vanilla planifolia HOM05D017293 ORTHO05D019386 8.6e-10 68.6 48 72.9
arahy.Tifrunner.gnm1.ann1.04V0U4 Arachis hypogaea HOM05D003404 ORTHO05D004052 1.5e-09 67.8 40 77.5
arahy.Tifrunner.gnm1.ann1.UB9Q96 Arachis hypogaea HOM05D003404 ORTHO05D004052 1.5e-09 67.8 40 77.5
MCO07G702 Micromonas commoda HOM05D003404 ORTHO05D004052 2.5e-09 67.0 253 27.3
HPP92_012175 Vanilla planifolia HOM05D017293 ORTHO05D019386 7.3e-09 65.5 69 53.6
arahy.Tifrunner.gnm1.ann1.I4H71T Arachis hypogaea HOM05D003404 ORTHO05D004052 5.2e-07 59.3 33 81.8
Lsat_1_v5_gn_2_40780 Lactuca sativa HOM05D003404 ORTHO05D004052 6.8e-07 58.9 60 51.7
PRCOL_00003487 Prasinoderma coloniale HOM05D003404 ORTHO05D004052 4.4e-06 56.2 220 28.6


User provided reference genes

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