Gene: Pp3c8_3260

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c8_3260
  • Transcript Identifier Pp3c8_3260V3.1
  • Gene Type Coding gene
  • Location Chr08 : 1677114-1686906 : positive

Gene Family Information

  • ID HOM05D003404
  • #Genes/#Species 201/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c8_3260V3.1
  • pacid 32965953
  • alias Phpat.008G013700
  • alias Pp1s35_209V6
  • alias Phypa_206822
  • uniprot A0A2K1K5Z2

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010265
IBA
IEA
GOA DatabaseSCF complex assembly
GO:0010265
IEA
InterProSCF complex assembly
GO:0016567
IBA
GOA Databaseprotein ubiquitination
GO:0010051
ISO
PLAZA Integrative Orthologyxylem and phloem pattern formation AT2G02560
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT2G02560
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT2G02560

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G02560

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT2G02560
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G02560
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G02560

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039852 Cullin-associated NEDD8-dissociated protein 1/2
IPR016024 Armadillo-type fold
IPR011989 Armadillo-like helical
IPR013932 TATA-binding protein interacting (TIP20)
Mapman id Description
19.2.2.8.1.5 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.adaptor protein exchange factor (CAND1)