Gene: AT2G02560

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G02560
  • Transcript Identifier AT2G02560.2
  • Gene Type Coding gene
  • Location Chr2 : 690345-697342 : positive

Gene Family Information

  • ID HOM05D003404
  • #Genes/#Species 201/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G02560.2
  • symbol CAND1
  • Alias ATCAND1,CULLIN-ASSOCIATED AND NEDDYLATION DISSOCIATED 1,ETA2,HVE,HEMIVENATA,TIP120
  • uniprot Q8L5Y6

Descriptions

  • Description cullin-associated and neddylation dissociated
  • Computational description cullin-associated and neddylation dissociated (CAND1); FUNCTIONS IN: binding; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, vegetative to reproductive phase transition of meristem; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), TATA-binding protein interacting (TIP20) (InterPro:IPR013932); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Computational description cullin-associated and neddylation dissociated (CAND1); FUNCTIONS IN: binding; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, vegetative to reproductive phase transition of meristem; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), TATA-binding protein interacting (TIP20) (InterPro:IPR013932); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009733
IMP
Gene Ontologyresponse to auxin1
GO:0010228
IMP
Gene Ontologyvegetative to reproductive phase transition of meristem2
GO:0010051
IMP
Gene Ontologyxylem and phloem pattern formation3
GO:0016567
IBA
Gene Ontologyprotein ubiquitination4
GO:0010265
IEA
GOA DatabaseSCF complex assembly
GO:0010265
IBA
Gene OntologySCF complex assembly4
GO:0010265
IEA
InterProSCF complex assembly

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM, IBA
Gene Ontologynucleus4
GO:0009505
HDA
Gene Ontologyplant-type cell wall5
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005886
HDA
Gene Ontologyplasma membrane6
GO:0005618
IDA
GOA Databasecell wall
GO:0005829
IDA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013932 TATA-binding protein interacting (TIP20)
IPR011989 Armadillo-like helical
IPR016024 Armadillo-type fold
IPR039852 Cullin-associated NEDD8-dissociated protein 1/2
Mapman id Description
19.2.2.8.1.5 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.adaptor protein exchange factor (CAND1)