Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.RZ3A35 Arachis hypogaea HOM05D003763 ORTHO05D004315 1.5e-160 569.7 328 100.0
arahy.Tifrunner.gnm1.ann1.HFU20B Arachis hypogaea HOM05D003763 ORTHO05D004315 2.0e-157 559.3 328 97.3
arahy.Tifrunner.gnm1.ann1.QN4KPS Arachis hypogaea HOM05D003763 ORTHO05D004315 3.1e-126 455.7 339 81.1
Lj4g0003870 Lotus japonicus HOM05D003763 ORTHO05D004315 1.5e-125 453.4 331 82.2
Lalb_Chr05g0214701 Lupinus albus HOM05D003763 ORTHO05D004315 3.7e-124 448.7 329 82.7
Glyma.05G051300 Glycine max HOM05D003763 ORTHO05D004315 3.2e-123 445.7 330 81.8
Phvul.003G213900 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 1.3e-121 440.3 330 80.9
VMungo1215G3348 Vigna mungo HOM05D003763 ORTHO05D004315 3.9e-121 438.7 359 74.9
Glyma.17G133200 Glycine max HOM05D003763 ORTHO05D004315 8.6e-121 437.6 333 81.4
Ca_20236_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 1.1e-120 437.2 332 80.4
Glyma.01G214300 Glycine max HOM05D003763 ORTHO05D004315 1.5e-120 436.8 329 79.9
Manes.01G070000 Manihot esculenta HOM05D003763 ORTHO05D004315 5.6e-120 434.9 329 79.6
Cfa012069 Carpinus fangiana HOM05D003763 ORTHO05D004315 7.3e-120 434.5 332 80.1
VMungo1215G1438 Vigna mungo HOM05D003763 ORTHO05D004315 7.3e-120 434.5 332 78.0
Thecc.03G267900 Theobroma cacao HOM05D003763 ORTHO05D004315 6.8e-118 427.9 332 78.6
Gohir.D08G195200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 2.0e-117 426.4 329 80.2
TWI81G0532 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 7.5e-117 424.5 332 78.0
Sabra03G0083200 Salix brachista HOM05D003763 ORTHO05D004315 9.8e-117 424.1 332 78.3
Potri.003G119200 Populus trichocarpa HOM05D003763 ORTHO05D004315 1.3e-116 423.7 332 78.3
Medtr5g011220 Medicago truncatula HOM05D003763 ORTHO05D004315 1.7e-116 423.3 329 77.2
Gorai.004G206000 Gossypium raimondii HOM05D003763 ORTHO05D004315 2.2e-116 422.9 332 80.7
TWI60G0957 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 6.4e-116 421.4 332 78.3
Cpa.g.sc29.40 Carica papaya HOM05D003763 ORTHO05D004315 1.4e-115 420.2 332 78.0
Phvul.002G152800 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 2.4e-115 419.5 334 76.0
Medtr4g102440 Medicago truncatula HOM05D003763 ORTHO05D004315 7.1e-115 417.9 323 79.3
Psat4g068320 Pisum sativum HOM05D003763 ORTHO05D004315 4.6e-114 415.2 324 75.3
CANSAT21G0452 Cannabis sativa HOM05D003763 ORTHO05D004315 6.0e-114 414.8 333 76.9
Duzib205G0169 Durio zibethinus HOM05D003763 ORTHO05D004315 6.0e-114 414.8 332 78.9
Potri.001G113000 Populus trichocarpa HOM05D003763 ORTHO05D004315 7.8e-114 414.5 332 75.6
Prupe.5G086900 Prunus persica HOM05D003763 ORTHO05D004315 7.8e-114 414.5 332 75.6
TPR.G37646 Trifolium pratense HOM05D003763 ORTHO05D004315 7.8e-114 414.5 341 75.1
COL.COLO4_23800 Corchorus olitorius HOM05D003763 ORTHO05D004315 1.3e-113 413.7 333 77.8
Duzib084G0949 Durio zibethinus HOM05D003763 ORTHO05D004315 1.3e-113 413.7 327 78.9
CiPaw.12G101000 Carya illinoinensis HOM05D003763 ORTHO05D004315 5.1e-113 411.8 327 78.0
MELO3C014009.2 Cucumis melo HOM05D003763 ORTHO05D004315 1.9e-112 409.8 309 77.3
MD04G1071000 Malus domestica HOM05D003763 ORTHO05D004315 5.6e-112 408.3 334 75.4
vmacro14015 Vaccinium macrocarpon HOM05D003763 ORTHO05D004315 5.6e-112 408.3 344 73.3
Ca_24565_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 9.5e-112 407.5 330 76.1
TAR629G0773 Trochodendron aralioides HOM05D003763 ORTHO05D004315 9.5e-112 407.5 329 74.8
Sed0026462 Sechium edule HOM05D003763 ORTHO05D004315 1.2e-111 407.1 327 74.3
Sopen08g003700 Solanum pennellii HOM05D003763 ORTHO05D004315 1.2e-111 407.1 290 82.4
FAN08G0919 Fragaria x ananassa HOM05D003763 ORTHO05D004315 2.8e-111 406.0 330 75.8
FvH4_5g01180 Fragaria vesca HOM05D003763 ORTHO05D004315 3.6e-111 405.6 330 75.8
PGSC0003DMG400012494 Solanum tuberosum HOM05D003763 ORTHO05D004315 3.6e-111 405.6 290 82.4
Nitab4.5_0010547g0050 Nicotiana tabacum HOM05D003763 ORTHO05D004315 4.7e-111 405.2 335 74.3
FAN13G2490 Fragaria x ananassa HOM05D003763 ORTHO05D004315 6.2e-111 404.8 330 75.8
TAR622G0836 Trochodendron aralioides HOM05D003763 ORTHO05D004315 8.1e-111 404.4 334 74.6
Ciclev10021127m.g Citrus clementina HOM05D003763 ORTHO05D004315 1.1e-110 404.1 328 75.3
FAN04G0845 Fragaria x ananassa HOM05D003763 ORTHO05D004315 1.1e-110 404.1 329 75.1
BcaC01g04611 Brassica carinata HOM05D003763 ORTHO05D004315 3.1e-110 402.5 329 75.4
C03p35720 Brassica napus HOM05D003763 ORTHO05D004315 3.1e-110 402.5 329 75.4
CSS0001568 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 4.0e-110 402.1 325 76.0
CAN.G981.62 Capsicum annuum HOM05D003763 ORTHO05D004315 4.0e-110 402.1 284 83.1
Dinv37708 Davidia involucrata HOM05D003763 ORTHO05D004315 5.2e-110 401.7 332 74.7
Migut.E01022 Erythranthe guttata HOM05D003763 ORTHO05D004315 5.2e-110 401.7 332 74.1
CsaV3_3G003430 Cucumis sativus L. HOM05D003763 ORTHO05D004315 6.8e-110 401.4 293 79.9
Gorai.008G242200 Gossypium raimondii HOM05D003763 ORTHO05D004315 6.8e-110 401.4 320 76.9
Migut.E01271 Erythranthe guttata HOM05D003763 ORTHO05D004315 1.2e-109 400.6 332 73.8
Gohir.D12G226200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 1.2e-109 400.6 320 76.9
BolC3t15881H Brassica oleracea HOM05D003763 ORTHO05D004315 1.5e-109 400.2 329 75.1
FAN18G3786 Fragaria x ananassa HOM05D003763 ORTHO05D004315 1.5e-109 400.2 339 73.5
Sopen08g028400 Solanum pennellii HOM05D003763 ORTHO05D004315 1.5e-109 400.2 332 73.8
CSS0018103 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 2.0e-109 399.8 332 73.2
CAN.G1394.10 Capsicum annuum HOM05D003763 ORTHO05D004315 3.4e-109 399.1 290 80.0
Lj2g0000892 Lotus japonicus HOM05D003763 ORTHO05D004315 4.4e-109 398.7 330 76.4
GSVIVG01019890001 Vitis vinifera HOM05D003763 ORTHO05D004315 4.4e-109 398.7 330 74.2
Peaxi162Scf00102g01354 Petunia axillaris HOM05D003763 ORTHO05D004315 5.8e-109 398.3 290 81.4
BcaB01g02662 Brassica carinata HOM05D003763 ORTHO05D004315 9.9e-109 397.5 329 74.5
PGSC0003DMG400022731 Solanum tuberosum HOM05D003763 ORTHO05D004315 9.9e-109 397.5 332 72.9
Atru.chr9.1500 Acer truncatum HOM05D003763 ORTHO05D004315 1.3e-108 397.1 332 75.9
Lsat_1_v5_gn_6_78800 Lactuca sativa HOM05D003763 ORTHO05D004315 2.9e-108 396.0 334 73.4
Oeu021144.1 Olea europaea HOM05D003763 ORTHO05D004315 2.9e-108 396.0 284 80.6
Oeu056817.1 Olea europaea HOM05D003763 ORTHO05D004315 3.7e-108 395.6 337 71.5
Sed0016409 Sechium edule HOM05D003763 ORTHO05D004315 4.9e-108 395.2 289 81.3
SalBow6G0972 Salvia bowleyana HOM05D003763 ORTHO05D004315 8.4e-108 394.4 328 73.8
DCAR_000890 Daucus carota HOM05D003763 ORTHO05D004315 1.1e-107 394.0 328 73.5
RcHm_v2.0_Chr7g0199911 Rosa chinensis HOM05D003763 ORTHO05D004315 1.1e-107 394.0 332 74.7
A03p29510 Brassica napus HOM05D003763 ORTHO05D004315 1.4e-107 393.7 330 74.5
BraA03t12145Z Brassica rapa HOM05D003763 ORTHO05D004315 1.4e-107 393.7 330 74.5
Aa31LG9G10510 Aethionema arabicum HOM05D003763 ORTHO05D004315 1.9e-107 393.3 331 72.8
Eucgr.D01944 Eucalyptus grandis HOM05D003763 ORTHO05D004315 4.1e-107 392.1 290 80.0
Hund14702 Selenicereus undatus HOM05D003763 ORTHO05D004315 7.1e-107 391.3 338 72.5
Aqoxy7G00504 Aquilegia oxysepala HOM05D003763 ORTHO05D004315 1.2e-106 390.6 327 72.8
MSTRG.13805 Avicennia marina HOM05D003763 ORTHO05D004315 1.2e-106 390.6 326 72.1
EL10Ac5g12684 Beta vulgaris HOM05D003763 ORTHO05D004315 1.6e-106 390.2 333 71.5
THA.LOC104806356 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 2.1e-106 389.8 336 73.2
Cc08_g13730 Coffea canephora HOM05D003763 ORTHO05D004315 3.5e-106 389.0 329 74.5
ECA240G4155 Erigeron canadensis HOM05D003763 ORTHO05D004315 3.5e-106 389.0 288 77.8
Nn1g01278 Nelumbo nucifera HOM05D003763 ORTHO05D004315 4.6e-106 388.7 321 73.8
THA.LOC104814132 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 4.6e-106 388.7 329 73.3
Migut.A00895 Erythranthe guttata HOM05D003763 ORTHO05D004315 6.0e-106 388.3 324 72.8
Sp7g20960 Schrenkiella parvula HOM05D003763 ORTHO05D004315 6.0e-106 388.3 330 72.1
HanXRQChr13g0414021 Helianthus annuus HOM05D003763 ORTHO05D004315 1.7e-105 386.7 330 71.8
Rhsim07G0096500 Rhododendron simsii HOM05D003763 ORTHO05D004315 1.7e-105 386.7 383 65.3
Sp6g05550 Schrenkiella parvula HOM05D003763 ORTHO05D004315 1.7e-105 386.7 340 72.1
Hma1.2p1_0138F.1_g062780 Hydrangea macrophylla HOM05D003763 ORTHO05D004315 2.3e-105 386.3 289 78.2
Carub.0006s3106 Capsella rubella HOM05D003763 ORTHO05D004315 5.1e-105 385.2 331 72.2
Carub.0007s1839 Capsella rubella HOM05D003763 ORTHO05D004315 5.1e-105 385.2 337 70.9
Thhalv10028695m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 5.1e-105 385.2 330 73.6
AT4G22890 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 6.6e-105 384.8 330 71.5
CDE04G2291 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 6.6e-105 384.8 300 76.3
AUR62017330 Chenopodium quinoa HOM05D003763 ORTHO05D004315 1.5e-104 383.6 333 70.3
CARHR254330 Cardamine hirsuta HOM05D003763 ORTHO05D004315 3.3e-104 382.5 331 73.4
Sc22g0000420 Simmondsia chinensis HOM05D003763 ORTHO05D004315 3.3e-104 382.5 332 70.8
AUR62010559 Chenopodium quinoa HOM05D003763 ORTHO05D004315 9.6e-104 380.9 333 69.7
Ah.12g057870 Amaranthus hybridus HOM05D003763 ORTHO05D004315 1.2e-103 380.6 333 70.6
Thhalv10025739m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 1.2e-103 380.6 330 72.4
AL6G46730 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 4.7e-103 378.6 324 72.2
Aa31LG6G4960 Aethionema arabicum HOM05D003763 ORTHO05D004315 6.2e-103 378.3 333 70.3
Actinidia27416 Actinidia chinensis HOM05D003763 ORTHO05D004315 8.1e-103 377.9 261 84.7
AT4G11960 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 8.1e-103 377.9 285 78.9
BcaNung01019 Brassica carinata HOM05D003763 ORTHO05D004315 1.4e-102 377.1 330 71.5
Lsat_1_v5_gn_6_8180 Lactuca sativa HOM05D003763 ORTHO05D004315 1.8e-102 376.7 334 70.4
PSO782G5713 Papaver somniferum HOM05D003763 ORTHO05D004315 1.8e-102 376.7 323 71.5
PGR031G0886 Punica granatum HOM05D003763 ORTHO05D004315 1.8e-102 376.7 333 71.8
A03p53850 Brassica napus HOM05D003763 ORTHO05D004315 2.4e-102 376.3 330 70.6
PSO478G4698 Papaver somniferum HOM05D003763 ORTHO05D004315 2.4e-102 376.3 322 71.4
BcaNung01664 Brassica carinata HOM05D003763 ORTHO05D004315 8.9e-102 374.4 280 78.9
C07p52250 Brassica napus HOM05D003763 ORTHO05D004315 1.5e-101 373.6 330 70.0
unitig_52.g17229 Utricularia gibba HOM05D003763 ORTHO05D004315 2.0e-101 373.2 322 72.4
HanXRQChr03g0084111 Helianthus annuus HOM05D003763 ORTHO05D004315 2.6e-101 372.9 312 72.8
SalBow1G0491 Salvia bowleyana HOM05D003763 ORTHO05D004315 2.6e-101 372.9 281 80.1
A01p14110 Brassica napus HOM05D003763 ORTHO05D004315 3.4e-101 372.5 326 70.6
BraA01t01359Z Brassica rapa HOM05D003763 ORTHO05D004315 3.4e-101 372.5 326 70.6
BolC7t45719H Brassica oleracea HOM05D003763 ORTHO05D004315 7.6e-101 371.3 329 69.6
CARHR229930 Cardamine hirsuta HOM05D003763 ORTHO05D004315 2.2e-100 369.8 330 70.3
Nitab4.5_0002886g0120 Nicotiana tabacum HOM05D003763 ORTHO05D004315 2.2e-100 369.8 309 67.6
Nitab4.5_0001200g0070 Nicotiana tabacum HOM05D003763 ORTHO05D004315 2.9e-100 369.4 257 74.7
ClCG00G002290 Citrullus lanatus HOM05D003763 ORTHO05D004315 4.9e-100 368.6 265 82.6
BcaC09g51065 Brassica carinata HOM05D003763 ORTHO05D004315 8.4e-100 367.9 326 69.9
C01p17370 Brassica napus HOM05D003763 ORTHO05D004315 8.4e-100 367.9 326 69.9
BolC1t01675H Brassica oleracea HOM05D003763 ORTHO05D004315 8.4e-100 367.9 326 69.9
arahy.Tifrunner.gnm1.ann1.N69HTX Arachis hypogaea HOM05D003763 ORTHO05D004315 1.9e-99 366.7 339 70.2
Lj8C243T4 Lonicera japonica HOM05D003763 ORTHO05D004315 1.9e-99 366.7 263 83.3
Solyc08g007770.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 3.2e-99 365.9 264 82.6
Lj2A202G55 Lonicera japonica HOM05D003763 ORTHO05D004315 1.7e-97 360.1 265 76.2
Solyc08g080050.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 2.3e-97 359.8 306 73.5
Gohir.A08G176900 Gossypium hirsutum HOM05D003763 ORTHO05D004315 4.3e-96 355.5 231 90.0
Zm00001eb064990 Zea mays HOM05D003763 ORTHO05D004315 1.1e-94 350.9 267 75.7
ATR0661G459 Amborella trichopoda HOM05D003763 ORTHO05D004315 1.4e-94 350.5 261 77.4
Haze_08989 Corylus avellana HOM05D003763 ORTHO05D004315 2.6e-93 346.3 310 73.2
Os03g0857400 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 3.4e-93 345.9 304 69.7
BraA03t14454Z Brassica rapa HOM05D003763 ORTHO05D004315 2.9e-92 342.8 305 70.8
AL7G30630 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 8.4e-92 341.3 231 85.3
Actinidia14012 Actinidia chinensis HOM05D003763 ORTHO05D004315 1.9e-88 330.1 229 86.5
Nitab4.5_0003274g0090 Nicotiana tabacum HOM05D003763 ORTHO05D004315 2.5e-88 329.7 332 58.1
Mapoly0048s0082 Marchantia polymorpha HOM05D003763 ORTHO05D004315 8.1e-87 324.7 261 72.8
ClCG00G000150 Citrullus lanatus HOM05D003763 ORTHO05D004315 6.7e-81 305.1 290 67.6
ClCG10G003400 Citrullus lanatus HOM05D003763 ORTHO05D004315 6.7e-81 305.1 290 67.6
SEGI_18243 Sequoiadendron giganteum HOM05D003763 ORTHO05D004315 8.7e-81 304.7 278 62.9
Peaxi162Scf00620g00056 Petunia axillaris HOM05D003763 ORTHO05D004315 8.1e-79 298.1 365 58.1
AagrBONN_evm.TU.Sc2ySwM_362.2619 Anthoceros agrestis HOM05D003763 ORTHO05D004315 1.1e-78 297.7 247 63.2
Pp3c10_15390 Physcomitrium patens HOM05D003763 ORTHO05D004315 6.9e-78 295.0 321 58.3
Psat2g180880 Pisum sativum HOM05D003763 ORTHO05D004315 1.5e-77 293.9 262 72.1
SMO356G0021 Selaginella moellendorffii HOM05D003763 ORTHO05D004315 1.0e-76 291.2 250 60.0
Actinidia05236 Actinidia chinensis HOM05D003763 ORTHO05D004315 2.3e-73 280.0 250 62.8
Psat6g136800 Pisum sativum HOM05D003763 ORTHO05D004315 8.7e-73 278.1 192 85.4
unitig_699.g19760 Utricularia gibba HOM05D003763 ORTHO05D004315 1.6e-71 273.9 274 67.9
CiPaw.11G143200 Carya illinoinensis HOM05D003763 ORTHO05D004315 2.1e-71 273.5 240 77.5
Dinv39038 Davidia involucrata HOM05D003763 ORTHO05D004315 3.2e-67 259.6 250 75.2
CBR_g23735 Chara braunii HOM05D003763 ORTHO05D004315 3.0e-57 226.5 288 44.8
Cre07.g340200 Chlamydomonas reinhardtii HOM05D003763 ORTHO05D004315 2.0e-56 223.8 268 50.7
Zm00001eb065010 Zea mays HOM05D003763 ORTHO05D004315 4.4e-56 222.6 149 75.2
Glyma.12G170600 Glycine max HOM05D003763 ORTHO05D004315 6.9e-54 215.3 149 75.2
CDE07G1293 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 5.0e-52 209.1 125 80.0
Gohir.A12G223632 Gossypium hirsutum HOM05D003763 ORTHO05D004315 1.6e-50 204.1 124 80.6
MSTRG.12034 Avicennia marina HOM05D003763 ORTHO05D004315 4.0e-41 172.9 157 77.7
CDE07G1747 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 3.3e-40 169.9 188 67.0
Gohir.A12G223566 Gossypium hirsutum HOM05D003763 ORTHO05D004315 9.1e-38 161.8 121 74.4
HPP92_014954 Vanilla planifolia HOM05D003763 ORTHO05D004315 3.4e-32 143.3 102 75.5
TPR.G14577 Trifolium pratense HOM05D003763 ORTHO05D004315 8.3e-31 138.7 108 75.9
Actinidia02868 Actinidia chinensis HOM05D003763 ORTHO05D004315 1.7e-28 131.0 264 37.9
Zm00001eb305640 Zea mays HOM05D003763 ORTHO05D004315 3.8e-28 129.8 96 71.9
Lsat_1_v5_gn_8_1701 Lactuca sativa HOM05D003763 ORTHO05D004315 1.2e-26 124.8 92 70.7
Zm00001eb065020 Zea mays HOM05D003763 ORTHO05D004315 3.1e-22 110.2 77 74.0
Pp3c3_19870 Physcomitrium patens HOM05D003763 ORTHO05D004315 1.8e-17 94.4 107 67.3
BcaC02g09855 Brassica carinata HOM05D003763 ORTHO05D004315 4.0e-17 93.2 147 51.0
arahy.Tifrunner.gnm1.ann1.AG3Z3P Arachis hypogaea HOM05D003763 ORTHO05D004315 2.0e-16 90.9 93 58.1
TPR.G23383 Trifolium pratense HOM05D003424 ORTHO05D004025 4.4e-16 89.7 132 45.5
Os08g0526300 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 7.5e-16 89.0 83 79.5
C04p35880 Brassica napus HOM05D003763 ORTHO05D004315 1.8e-14 84.3 149 51.7
CAN.G835.4 Capsicum annuum HOM05D000091 ORTHO05D003679 4.1e-06 56.6 36 83.3


User provided reference genes

Program Settings