Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.RK3EBX Arachis hypogaea HOM05D005045 ORTHO05D006386 0.0e+00 1213.7 634 100.0
arahy.Tifrunner.gnm1.ann1.2Y4S4L Arachis hypogaea HOM05D005045 ORTHO05D006386 0.0e+00 1198.7 634 98.7
CiPaw.01G116800 Carya illinoinensis HOM05D005045 ORTHO05D006386 1.9e-289 998.8 631 81.0
Cfa014961 Carpinus fangiana HOM05D005045 ORTHO05D006386 3.5e-288 994.6 631 81.1
Cpa.g.sc157.48 Carica papaya HOM05D005045 ORTHO05D006386 2.5e-286 988.4 631 80.3
TWI53G1845 Tripterygium wilfordii HOM05D005045 ORTHO05D006386 3.3e-286 988.0 631 80.8
Lj6g0005100 Lotus japonicus HOM05D005045 ORTHO05D006386 2.1e-280 968.8 631 79.6
Potri.001G320300 Populus trichocarpa HOM05D005045 ORTHO05D006386 7.6e-275 950.3 631 77.5
Phvul.001G266800 Phaseolus vulgaris HOM05D005045 ORTHO05D006386 1.7e-274 949.1 631 78.0
Glyma.18G002400 Glycine max HOM05D005045 ORTHO05D006386 4.9e-274 947.6 631 78.8
Sed0026716 Sechium edule HOM05D005045 ORTHO05D006386 7.1e-273 943.7 631 76.7
Actinidia28996 Actinidia chinensis HOM05D005045 ORTHO05D006386 8.7e-271 936.8 630 77.6
Prupe.1G165000 Prunus persica HOM05D005045 ORTHO05D006386 2.5e-270 935.3 631 76.4
Lalb_Chr11g0075871 Lupinus albus HOM05D005045 ORTHO05D006386 5.7e-270 934.1 631 77.8
Ciclev10004166m.g Citrus clementina HOM05D005045 ORTHO05D006386 7.4e-270 933.7 631 76.2
Sabra16G0202900 Salix brachista HOM05D005045 ORTHO05D006386 2.6e-267 925.2 615 77.6
Atru.chr4.1578 Acer truncatum HOM05D005045 ORTHO05D006386 1.3e-266 922.9 611 78.7
Dinv38168 Davidia involucrata HOM05D005045 ORTHO05D006386 1.2e-264 916.4 631 75.4
Manes.03G144200 Manihot esculenta HOM05D005045 ORTHO05D006386 1.0e-263 913.3 631 74.8
CSS0020032 Camellia sinensis var. sinensis HOM05D005045 ORTHO05D006386 2.3e-263 912.1 631 74.6
VMungo1383G3533 Vigna mungo HOM05D005045 ORTHO05D006386 3.0e-263 911.8 631 75.3
MELO3C006292.2 Cucumis melo HOM05D005045 ORTHO05D006386 1.5e-262 909.4 631 74.3
TAR362G1154 Trochodendron aralioides HOM05D005045 ORTHO05D006386 2.4e-260 902.1 629 75.4
THA.LOC104826172 Tarenaya hassleriana HOM05D005045 ORTHO05D006386 1.0e-258 896.7 631 73.2
PGR142G0016 Punica granatum HOM05D005045 ORTHO05D006386 4.7e-256 887.9 631 73.9
ClCG05G003110 Citrullus lanatus HOM05D005045 ORTHO05D006386 3.0e-255 885.2 679 69.7
Carub.0004s1329 Capsella rubella HOM05D005045 ORTHO05D006386 8.8e-255 883.6 631 72.4
CAN.G765.38 Capsicum annuum HOM05D005045 ORTHO05D006386 2.2e-253 879.0 631 71.0
Peaxi162Scf00423g00410 Petunia axillaris HOM05D005045 ORTHO05D006386 3.7e-253 878.2 631 71.5
MD05G1230300 Malus domestica HOM05D005045 ORTHO05D006386 2.0e-251 872.5 631 69.9
FvH4_4g13300 Fragaria vesca HOM05D005045 ORTHO05D006386 4.5e-251 871.3 631 72.1
FAN12G2321 Fragaria x ananassa HOM05D005045 ORTHO05D006386 4.5e-251 871.3 631 71.9
Thhalv10016151m.g Eutrema salsugineum HOM05D005045 ORTHO05D006386 1.0e-250 870.2 631 71.5
RcHm_v2.0_Chr4g0413591 Rosa chinensis HOM05D005045 ORTHO05D006386 6.5e-250 867.5 631 71.6
Ca_16406_v3 Cicer arietinum L. HOM05D005045 ORTHO05D006386 1.4e-249 866.3 631 72.4
CsaV3_3G010730 Cucumis sativus L. HOM05D005045 ORTHO05D006386 9.4e-249 863.6 631 71.5
Psat5g100040 Pisum sativum HOM05D005045 ORTHO05D006386 1.6e-248 862.8 631 71.3
Nitab4.5_0002260g0080 Nicotiana tabacum HOM05D005045 ORTHO05D006386 1.8e-247 859.4 631 71.0
Aa31LG5G5040 Aethionema arabicum HOM05D005045 ORTHO05D006386 2.3e-247 859.0 612 73.0
Thecc.04G195000 Theobroma cacao HOM05D005045 ORTHO05D006386 2.0e-246 855.9 608 72.7
TPR.G25379 Trifolium pratense HOM05D005045 ORTHO05D006386 1.7e-245 852.8 620 72.4
PSO017G0058 Papaver somniferum HOM05D005045 ORTHO05D006386 3.1e-244 848.6 631 69.6
Sopen05g032270 Solanum pennellii HOM05D005045 ORTHO05D006386 4.1e-244 848.2 631 69.1
Medtr3g084300 Medicago truncatula HOM05D005045 ORTHO05D006386 6.5e-242 840.9 630 70.8
Sp4g14350 Schrenkiella parvula HOM05D005045 ORTHO05D006386 1.5e-241 839.7 631 70.2
BcaB01g04004 Brassica carinata HOM05D005045 ORTHO05D006386 7.2e-241 837.4 631 69.9
HPP92_024209 Vanilla planifolia HOM05D005045 ORTHO05D006386 7.2e-241 837.4 631 68.5
Solyc05g053800.3 Solanum lycopersicum HOM05D005045 ORTHO05D006386 6.1e-240 834.3 631 68.3
A03p17990 Brassica napus HOM05D005045 ORTHO05D006386 7.5e-238 827.4 648 68.5
Gohir.D02G022400 Gossypium hirsutum HOM05D005045 ORTHO05D006386 7.5e-238 827.4 609 69.8
BraA03t11060Z Brassica rapa HOM05D005045 ORTHO05D006386 2.2e-237 825.9 652 68.1
Gohir.A02G019100 Gossypium hirsutum HOM05D005045 ORTHO05D006386 2.2e-237 825.9 612 69.3
Gorai.005G027800 Gossypium raimondii HOM05D005045 ORTHO05D006386 2.2e-237 825.9 609 69.6
AT2G31970 Arabidopsis thaliana HOM05D005045 ORTHO05D006386 5.3e-236 821.2 631 69.1
C03p21030 Brassica napus HOM05D005045 ORTHO05D006386 9.1e-236 820.5 637 68.9
Migut.G00767 Erythranthe guttata HOM05D005045 ORTHO05D006386 9.1e-236 820.5 631 67.8
BolC3t14484H Brassica oleracea HOM05D005045 ORTHO05D006386 1.2e-235 820.1 637 68.9
AL4G27320 Arabidopsis lyrata HOM05D005045 ORTHO05D006386 1.6e-235 819.7 631 69.1
Aqoxy2G03932 Aquilegia oxysepala HOM05D005045 ORTHO05D006386 2.0e-235 819.3 629 67.6
MBI07_g27366_MAGBIO Magnolia biondii HOM05D005045 ORTHO05D006386 1.0e-234 817.0 558 75.4
Cc03_g08470 Coffea canephora HOM05D005045 ORTHO05D006386 4.2e-233 811.6 631 68.6
Haze_11653 Corylus avellana HOM05D005045 ORTHO05D006386 9.4e-233 810.4 700 64.6
Nn3g20083 Nelumbo nucifera HOM05D005045 ORTHO05D006386 4.4e-230 801.6 639 67.3
FAN07G1455 Fragaria x ananassa HOM05D005045 ORTHO05D006386 3.3e-225 785.4 631 67.4
Zm00001eb181120 Zea mays HOM05D005045 ORTHO05D006386 3.0e-223 778.9 631 64.2
Duzib151G0179 Durio zibethinus HOM05D005045 ORTHO05D006386 1.5e-222 776.5 612 66.8
SHI26063 Sapria himalayana HOM05D005045 ORTHO05D006386 5.7e-222 774.6 735 59.2
ATR0561G148 Amborella trichopoda HOM05D005045 ORTHO05D006386 3.7e-221 771.9 631 65.3
EL10Ac3g07454 Beta vulgaris HOM05D005045 ORTHO05D006386 5.4e-220 768.1 631 65.6
vmacro15566 Vaccinium macrocarpon HOM05D005045 ORTHO05D006386 7.0e-220 767.7 684 62.4
Lsat_1_v5_gn_6_59140 Lactuca sativa HOM05D005045 ORTHO05D006386 7.8e-219 764.2 629 64.4
MSTRG.9796 Avicennia marina HOM05D005045 ORTHO05D006386 3.9e-218 761.9 631 63.9
FAN22G0494 Fragaria x ananassa HOM05D005045 ORTHO05D006386 5.0e-218 761.5 686 62.0
SEGI_03959 Sequoiadendron giganteum HOM05D005045 ORTHO05D006386 5.0e-218 761.5 631 64.3
SalBow8G0828 Salvia bowleyana HOM05D005045 ORTHO05D006386 2.5e-217 759.2 631 64.7
HanXRQChr02g0058481 Helianthus annuus HOM05D005045 ORTHO05D006386 6.1e-216 754.6 629 62.8
ECA233G4939 Erigeron canadensis HOM05D005045 ORTHO05D006386 8.9e-215 750.7 629 63.0
Eucgr.H00025 Eucalyptus grandis HOM05D005045 ORTHO05D006386 8.9e-215 750.7 524 74.2
CDE02G0777 Ceratophyllum demersum HOM05D005045 ORTHO05D006386 2.4e-212 742.7 632 63.8
SGA_v2.0_scaffold27G11679 Striga asiatica HOM05D005045 ORTHO05D006386 3.2e-212 742.3 631 62.3
Rhsim02G0061900 Rhododendron simsii HOM05D005045 ORTHO05D006386 3.9e-210 735.3 561 69.9
DCAR_005488 Daucus carota HOM05D005045 ORTHO05D006386 2.8e-208 729.2 604 64.2
Lj6C381G5 Lonicera japonica HOM05D005045 ORTHO05D006386 4.7e-208 728.4 593 67.5
Sc19g0007360 Simmondsia chinensis HOM05D005045 ORTHO05D006386 2.3e-194 682.9 524 68.5
arahy.Tifrunner.gnm1.ann1.KK4CMR Arachis hypogaea HOM05D005045 ORTHO05D006386 1.1e-183 647.5 444 78.8
Mapoly0027s0186 Marchantia polymorpha HOM05D005045 ORTHO05D006386 3.2e-164 582.8 629 51.7
Nitab4.5_0003358g0080 Nicotiana tabacum HOM05D005045 ORTHO05D006386 6.5e-157 558.5 467 64.7
Aqoxy430s001 Aquilegia oxysepala HOM05D005045 ORTHO05D006386 5.5e-156 555.4 522 57.9
AagrBONN_evm.TU.Sc2ySwM_368.995 Anthoceros agrestis HOM05D002013 ORTHO05D002293 2.5e-153 546.6 627 49.8
Pp3c10_3760 Physcomitrium patens HOM05D005045 ORTHO05D006386 3.1e-151 539.7 631 49.9
Lju912C0T2 Lonicera japonica HOM05D005045 ORTHO05D006386 1.7e-149 533.9 457 64.8
AUR62020862 Chenopodium quinoa HOM05D005045 ORTHO05D006386 1.1e-143 514.6 385 69.9
SMO356G0717 Selaginella moellendorffii HOM05D005045 ORTHO05D006386 1.8e-135 487.3 494 54.0
Ca_16414_v3 Cicer arietinum L. HOM05D005045 ORTHO05D006386 9.8e-121 438.3 222 97.3
Ca_16415_v3 Cicer arietinum L. HOM05D005045 ORTHO05D006386 1.8e-119 434.1 436 56.9
BcaNung07125 Brassica carinata HOM05D005045 ORTHO05D006386 5.2e-114 416.0 317 69.1
unitig_0.g1960 Utricularia gibba HOM05D005045 ORTHO05D006386 8.3e-112 408.7 224 89.7
SMO217G0009 Selaginella moellendorffii HOM05D005045 ORTHO05D006386 2.5e-100 370.5 390 53.1
COL.COLO4_20231 Corchorus olitorius HOM05D005045 ORTHO05D006386 2.9e-96 357.1 537 44.5
CBR_g44539 Chara braunii HOM05D005045 ORTHO05D006386 3.2e-95 353.6 646 37.2
Ah.04g149400 Amaranthus hybridus HOM05D005045 ORTHO05D006386 1.2e-91 341.7 223 80.3
PRCOL_00000463 Prasinoderma coloniale HOM05D005045 ORTHO05D006386 2.1e-78 297.7 551 35.6
MCO01G132 Micromonas commoda HOM05D005045 ORTHO05D006386 5.1e-77 293.1 578 35.5
Cre03.g192550 Chlamydomonas reinhardtii HOM05D005045 ORTHO05D006386 2.4e-74 284.3 255 54.1
Ah.04g149410 Amaranthus hybridus HOM05D005045 ORTHO05D006386 1.1e-68 265.4 391 40.9
Nitab4.5_0003358g0100 Nicotiana tabacum HOM05D005045 ORTHO05D006386 1.7e-64 251.5 126 96.0
Cfa022909 Carpinus fangiana HOM05D005045 ORTHO05D006386 1.9e-47 194.9 631 26.6
Prupe.1G180400 Prunus persica HOM05D005045 ORTHO05D006386 6.0e-46 189.9 170 59.4
unitig_0.g1961 Utricularia gibba HOM05D005045 ORTHO05D006386 2.5e-44 184.5 373 34.6
Oeu034322.3 Olea europaea HOM05D005045 ORTHO05D006386 2.8e-43 181.0 192 52.1
AUR62020863 Chenopodium quinoa HOM05D005045 ORTHO05D006386 3.7e-43 180.6 215 45.6
BcaB01g04008 Brassica carinata HOM05D005045 ORTHO05D006386 8.4e-40 169.5 225 46.2
Rhsim02G0061800 Rhododendron simsii HOM05D005045 ORTHO05D006386 2.4e-34 151.4 72 97.2
Actinidia11455 Actinidia chinensis HOM05D005045 ORTHO05D006386 5.9e-33 146.7 121 64.5
MBI07_g45033_MAGBIO Magnolia biondii HOM05D005045 ORTHO05D006386 1.4e-23 115.5 100 64.0
BcaNung07126 Brassica carinata HOM05D005045 ORTHO05D006386 1.5e-20 105.5 101 55.4
BcaC05g28670 Brassica carinata HOM05D005045 ORTHO05D006386 2.2e-19 101.7 77 70.1
BcaB01g04007 Brassica carinata HOM05D005045 ORTHO05D006386 3.7e-19 100.9 102 54.9
MBI07_g27365_MAGBIO Magnolia biondii HOM05D005045 ORTHO05D006386 2.0e-09 68.6 73 46.6


User provided reference genes

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