Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.PIH8R2 Arachis hypogaea HOM05D004270 ORTHO05D005037 1.3e-165 586.3 291 100.0
arahy.Tifrunner.gnm1.ann1.D5XWDC Arachis hypogaea HOM05D004270 ORTHO05D005037 5.0e-165 584.3 291 99.7
arahy.Tifrunner.gnm1.ann1.WIVF2E Arachis hypogaea HOM05D004270 ORTHO05D005037 5.1e-157 557.8 298 93.3
Lj1g0019682 Lotus japonicus HOM05D004270 ORTHO05D005037 1.9e-156 555.8 291 92.8
Psat3g099560 Pisum sativum HOM05D004270 ORTHO05D005037 7.3e-156 553.9 291 92.1
Medtr7g081220 Medicago truncatula HOM05D004270 ORTHO05D005037 1.2e-155 553.1 291 92.4
Ca_08047_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 2.1e-155 552.4 291 91.8
Ca_08053_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 2.1e-155 552.4 291 91.8
TPR.G21772 Trifolium pratense HOM05D004270 ORTHO05D005037 2.1e-155 552.4 288 93.4
VMungo1383G2841 Vigna mungo HOM05D004270 ORTHO05D005037 1.8e-154 549.3 291 91.4
TPR.G29107 Trifolium pratense HOM05D004270 ORTHO05D005037 3.4e-153 545.0 288 93.1
CiPaw.14G018200 Carya illinoinensis HOM05D004270 ORTHO05D005037 5.8e-153 544.3 291 90.0
Glyma.09G244900 Glycine max HOM05D004270 ORTHO05D005037 5.8e-153 544.3 292 91.1
Ciclev10005458m.g Citrus clementina HOM05D004270 ORTHO05D005037 7.6e-153 543.9 291 89.3
Phvul.008G049000 Phaseolus vulgaris HOM05D004270 ORTHO05D005037 1.3e-152 543.1 291 91.1
Thecc.06G006500 Theobroma cacao HOM05D004270 ORTHO05D005037 8.4e-152 540.4 291 88.7
Potri.002G061900 Populus trichocarpa HOM05D004270 ORTHO05D005037 2.4e-151 538.9 291 89.3
FvH4_3g14500 Fragaria vesca HOM05D004270 ORTHO05D005037 3.2e-151 538.5 291 89.0
AT1G79500 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 5.4e-151 537.7 291 89.3
Thhalv10018956m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 5.4e-151 537.7 291 89.3
CARHR073160 Cardamine hirsuta HOM05D004270 ORTHO05D005037 7.1e-151 537.3 291 90.0
FAN25G1815 Fragaria x ananassa HOM05D004270 ORTHO05D005037 9.2e-151 537.0 291 89.0
Potri.005G199100 Populus trichocarpa HOM05D004270 ORTHO05D005037 9.2e-151 537.0 291 89.0
Sp5g34553 Schrenkiella parvula HOM05D004270 ORTHO05D005037 1.6e-150 536.2 291 89.0
Atru.chr1.67 Acer truncatum HOM05D004270 ORTHO05D005037 2.7e-150 535.4 291 89.0
Actinidia07391 Actinidia chinensis HOM05D004270 ORTHO05D005037 3.5e-150 535.0 291 89.3
AL2G40110 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 3.5e-150 535.0 291 89.0
Manes.03G080050 Manihot esculenta HOM05D004270 ORTHO05D005037 3.5e-150 535.0 291 88.3
Duzib268G0296 Durio zibethinus HOM05D004270 ORTHO05D005037 4.6e-150 534.6 291 87.3
Thhalv10008359m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 4.6e-150 534.6 290 88.6
RcHm_v2.0_Chr5g0023881 Rosa chinensis HOM05D004270 ORTHO05D005037 4.6e-150 534.6 291 88.3
Carub.0002s2636 Capsella rubella HOM05D004270 ORTHO05D005037 6.0e-150 534.3 291 89.0
Sc15g0006060 Simmondsia chinensis HOM05D004270 ORTHO05D005037 1.3e-149 533.1 291 88.3
THA.LOC104812380 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 3.0e-149 531.9 287 88.2
TAR636G3127 Trochodendron aralioides HOM05D004270 ORTHO05D005037 3.0e-149 531.9 291 88.3
Sed0021681 Sechium edule HOM05D004270 ORTHO05D005037 3.9e-149 531.6 287 88.9
BcaC03g15900 Brassica carinata HOM05D004270 ORTHO05D005037 8.7e-149 530.4 291 88.0
CsaV3_1G034040 Cucumis sativus L. HOM05D004270 ORTHO05D005037 8.7e-149 530.4 287 88.9
CANSAT78G1193 Cannabis sativa HOM05D004270 ORTHO05D005037 1.1e-148 530.0 287 88.2
Migut.H01658 Erythranthe guttata HOM05D004270 ORTHO05D005037 1.1e-148 530.0 288 88.2
Gohir.D08G090400 Gossypium hirsutum HOM05D004270 ORTHO05D005037 1.1e-148 530.0 288 87.8
AUR62009294 Chenopodium quinoa HOM05D004270 ORTHO05D005037 1.5e-148 529.6 291 88.0
TWI12G0564 Tripterygium wilfordii HOM05D004270 ORTHO05D005037 1.5e-148 529.6 291 88.3
MELO3C020651.2 Cucumis melo HOM05D004270 ORTHO05D005037 1.9e-148 529.3 287 88.9
Duzib187G1348 Durio zibethinus HOM05D004270 ORTHO05D005037 1.9e-148 529.3 291 88.0
Nn6g34391 Nelumbo nucifera HOM05D004270 ORTHO05D005037 1.9e-148 529.3 290 87.6
GSVIVG01036737001 Vitis vinifera HOM05D004270 ORTHO05D005037 1.9e-148 529.3 291 88.7
BcaB02g07218 Brassica carinata HOM05D004270 ORTHO05D005037 2.5e-148 528.9 291 87.6
CARHR016810 Cardamine hirsuta HOM05D004270 ORTHO05D005037 2.5e-148 528.9 287 88.9
ClCG03G001640 Citrullus lanatus HOM05D004270 ORTHO05D005037 3.3e-148 528.5 287 88.5
HanXRQChr14g0449761 Helianthus annuus HOM05D004270 ORTHO05D005037 3.3e-148 528.5 291 87.3
PSO675G6017 Papaver somniferum HOM05D004270 ORTHO05D005037 3.3e-148 528.5 284 90.8
Sabra05G0151600 Salix brachista HOM05D004270 ORTHO05D005037 3.3e-148 528.5 312 83.3
AT1G16340 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 4.3e-148 528.1 287 88.9
MD10G1213400 Malus domestica HOM05D004270 ORTHO05D005037 4.3e-148 528.1 291 86.9
Gorai.004G095400 Gossypium raimondii HOM05D004270 ORTHO05D005037 5.6e-148 527.7 288 87.5
CSS0035574 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 7.3e-148 527.3 288 88.2
DCAR_016846 Daucus carota HOM05D004270 ORTHO05D005037 7.3e-148 527.3 291 87.6
PSO782G4107 Papaver somniferum HOM05D004270 ORTHO05D005037 7.3e-148 527.3 284 89.8
Prupe.4G129800 Prunus persica HOM05D004270 ORTHO05D005037 7.3e-148 527.3 288 87.8
EL10Ac2g04029 Beta vulgaris HOM05D004270 ORTHO05D005037 1.2e-147 526.6 291 86.9
CAN.G84.19 Capsicum annuum HOM05D004270 ORTHO05D005037 2.1e-147 525.8 291 87.6
AUR62041708 Chenopodium quinoa HOM05D004270 ORTHO05D005037 2.8e-147 525.4 291 87.3
AUR62043393 Chenopodium quinoa HOM05D004270 ORTHO05D005037 2.8e-147 525.4 291 87.3
PSO732G0600 Papaver somniferum HOM05D004270 ORTHO05D005037 2.8e-147 525.4 284 89.8
Lsat_1_v5_gn_2_88340 Lactuca sativa HOM05D004270 ORTHO05D005037 3.6e-147 525.0 291 87.3
Os12g0210800 Oryza sativa ssp. japonica HOM05D004270 ORTHO05D005037 3.6e-147 525.0 292 87.0
Hma1.2p1_0151F.1_g067120 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 6.2e-147 524.2 291 87.6
SGA_v2.0_scaffold49G18204 Striga asiatica HOM05D004270 ORTHO05D005037 6.2e-147 524.2 296 85.8
Aqoxy7G03543 Aquilegia oxysepala HOM05D004270 ORTHO05D005037 8.1e-147 523.9 285 87.7
AL1G28460 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 8.1e-147 523.9 287 87.8
Gohir.A08G080300 Gossypium hirsutum HOM05D004270 ORTHO05D005037 8.1e-147 523.9 288 86.8
PGR119G1968 Punica granatum HOM05D004270 ORTHO05D005037 3.1e-146 521.9 285 86.7
vmacro23274 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 9.0e-146 520.4 317 81.7
BraA02t07287Z Brassica rapa HOM05D004270 ORTHO05D005037 1.2e-145 520.0 292 87.3
Solyc11g072690.2 Solanum lycopersicum HOM05D004270 ORTHO05D005037 1.2e-145 520.0 288 86.8
Sopen11g030360 Solanum pennellii HOM05D004270 ORTHO05D005037 1.2e-145 520.0 288 86.8
THA.LOC104813606 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 1.2e-145 520.0 287 86.8
PGSC0003DMG400025362 Solanum tuberosum HOM05D004270 ORTHO05D005037 2.0e-145 519.2 288 86.8
MSTRG.13089 Avicennia marina HOM05D004270 ORTHO05D005037 2.6e-145 518.8 291 85.2
ECA238G3087 Erigeron canadensis HOM05D004270 ORTHO05D005037 2.6e-145 518.8 285 87.4
MSTRG.16093 Avicennia marina HOM05D004270 ORTHO05D005037 3.4e-145 518.5 288 85.1
A02p22860 Brassica napus HOM05D004270 ORTHO05D005037 3.4e-145 518.5 295 86.4
Ah.15g099350 Amaranthus hybridus HOM05D004270 ORTHO05D005037 5.8e-145 517.7 288 85.8
Cc11_g02350 Coffea canephora HOM05D004270 ORTHO05D005037 5.8e-145 517.7 291 84.9
C02p36680 Brassica napus HOM05D004270 ORTHO05D005037 9.9e-145 516.9 292 86.3
Ah.15g099360 Amaranthus hybridus HOM05D004270 ORTHO05D005037 1.7e-144 516.2 288 85.4
Carub.0001s1608 Capsella rubella HOM05D004270 ORTHO05D005037 1.7e-144 516.2 290 87.2
SGA_v2.0_scaffold239G44014 Striga asiatica HOM05D004270 ORTHO05D005037 1.7e-144 516.2 276 89.1
HPP92_024995 Vanilla planifolia HOM05D004270 ORTHO05D005037 8.4e-144 513.8 291 84.9
COL.COLO4_12345 Corchorus olitorius HOM05D004270 ORTHO05D005037 1.4e-143 513.1 273 90.5
Haze_02880 Corylus avellana HOM05D004270 ORTHO05D005037 1.9e-143 512.7 290 85.5
Lalb_Chr19g0126381 Lupinus albus HOM05D004270 ORTHO05D005037 2.4e-143 512.3 269 92.6
BolC6t38147H Brassica oleracea HOM05D004270 ORTHO05D005037 5.4e-143 511.1 291 86.3
BraA07t30356Z Brassica rapa HOM05D004270 ORTHO05D005037 1.2e-142 510.0 291 85.9
A07p27110 Brassica napus HOM05D004270 ORTHO05D005037 1.6e-142 509.6 291 85.6
BolC2t09663H Brassica oleracea HOM05D004270 ORTHO05D005037 2.7e-142 508.8 296 85.1
MD05G1236400 Malus domestica HOM05D004270 ORTHO05D005037 7.8e-142 507.3 291 84.5
QL04p092971 Quercus lobata HOM05D004270 ORTHO05D005037 1.0e-141 506.9 272 90.1
FAN16G1654 Fragaria x ananassa HOM05D004270 ORTHO05D005037 3.0e-141 505.4 272 89.7
Glyma.18G248300 Glycine max HOM05D004270 ORTHO05D005037 3.9e-141 505.0 273 90.1
QL04p091607 Quercus lobata HOM05D004270 ORTHO05D005037 8.7e-141 503.8 272 89.7
FAN11G3302 Fragaria x ananassa HOM05D004270 ORTHO05D005037 1.1e-140 503.4 288 85.4
Zm00001eb138330 Zea mays HOM05D004270 ORTHO05D005037 1.5e-140 503.1 289 84.8
BcaC08g45353 Brassica carinata HOM05D004270 ORTHO05D005037 7.3e-140 500.7 272 89.3
vmacro11688 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 2.1e-139 499.2 361 71.7
MBI07_g44658_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 3.1e-138 495.4 290 84.5
PGR119G0090 Punica granatum HOM05D004270 ORTHO05D005037 3.4e-137 491.9 285 83.2
BcaB05g25203 Brassica carinata HOM05D004270 ORTHO05D005037 5.8e-137 491.1 293 84.3
Ah.15g099340 Amaranthus hybridus HOM05D004270 ORTHO05D005037 9.9e-137 490.3 273 85.7
Aa31LG4G1520 Aethionema arabicum HOM05D004270 ORTHO05D005037 2.9e-136 488.8 272 88.6
Rhsim06G0243500 Rhododendron simsii HOM05D004270 ORTHO05D005037 4.9e-136 488.0 300 81.3
Lj7A89G46 Lonicera japonica HOM05D004270 ORTHO05D005037 1.9e-135 486.1 279 85.7
unitig_744.g24505 Utricularia gibba HOM05D004270 ORTHO05D005037 1.9e-135 486.1 268 86.6
Rhsim03G0145800 Rhododendron simsii HOM05D004270 ORTHO05D005037 1.6e-134 483.0 310 78.4
C06p29850 Brassica napus HOM05D004270 ORTHO05D005037 2.7e-134 482.3 272 87.5
SalBow8G2534 Salvia bowleyana HOM05D004270 ORTHO05D005037 4.6e-134 481.5 296 80.4
SalBow8G3927 Salvia bowleyana HOM05D004270 ORTHO05D005037 4.6e-134 481.5 296 80.4
BcaC08g45351 Brassica carinata HOM05D004270 ORTHO05D005037 1.0e-133 480.3 292 81.2
Lj7A89G45 Lonicera japonica HOM05D004270 ORTHO05D005037 5.1e-133 478.0 276 85.1
CSS0009623 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 1.5e-132 476.5 259 88.4
Duzib187G1262 Durio zibethinus HOM05D004270 ORTHO05D005037 9.6e-132 473.8 255 89.8
ATR0743G256 Amborella trichopoda HOM05D004270 ORTHO05D005037 4.5e-129 464.9 250 90.0
Nitab4.5_0004015g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 5.8e-129 464.5 291 79.4
ATR0561G061 Amborella trichopoda HOM05D004270 ORTHO05D005037 3.8e-128 461.8 250 89.2
SMO347G0325 Selaginella moellendorffii HOM05D004270 ORTHO05D005037 8.4e-128 460.7 271 80.1
Pp3c22_7420 Physcomitrium patens HOM05D004270 ORTHO05D005037 5.5e-127 458.0 286 75.5
Oeu026000.2 Olea europaea HOM05D004270 ORTHO05D005037 7.1e-127 457.6 324 71.9
Peaxi162Scf00616g00418 Petunia axillaris HOM05D004270 ORTHO05D005037 9.3e-127 457.2 288 79.2
FAN21G0266 Fragaria x ananassa HOM05D004270 ORTHO05D005037 7.9e-126 454.1 254 87.4
Hma1.2p1_2351F.1_g320490 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 1.0e-125 453.8 297 78.1
DCAR_013716 Daucus carota HOM05D004270 ORTHO05D005037 1.8e-125 453.0 238 92.4
Eucgr.K01360 Eucalyptus grandis HOM05D004270 ORTHO05D005037 2.5e-124 449.1 247 86.2
AagrBONN_evm.TU.Sc2ySwM_344.2891 Anthoceros agrestis HOM05D004270 ORTHO05D005037 6.2e-123 444.5 283 72.8
PSO832G2042 Papaver somniferum HOM05D004270 ORTHO05D005037 3.4e-121 438.7 284 78.5
Lj4A247G30 Lonicera japonica HOM05D004270 ORTHO05D005037 1.9e-119 433.0 242 86.8
vmacro08704 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 3.1e-114 415.6 389 60.2
Mapoly0024s0056 Marchantia polymorpha HOM05D004270 ORTHO05D005037 2.6e-113 412.5 290 69.3
CiPaw.13G024200 Carya illinoinensis HOM05D004270 ORTHO05D005037 1.3e-112 410.2 220 89.5
RcHm_v2.0_Chr6g0274781 Rosa chinensis HOM05D004270 ORTHO05D005037 3.2e-111 405.6 275 74.9
arahy.Tifrunner.gnm1.ann1.S8QNVY Arachis hypogaea HOM05D004270 ORTHO05D005037 3.4e-105 385.6 275 74.9
arahy.Tifrunner.gnm1.ann1.IC77ZE Arachis hypogaea HOM05D004270 ORTHO05D005037 3.7e-99 365.5 271 73.8
QL04p093439 Quercus lobata HOM05D004270 ORTHO05D005037 8.2e-99 364.4 400 52.8
CDE05G0560 Ceratophyllum demersum HOM05D004270 ORTHO05D005037 2.6e-97 359.4 191 88.0
Nitab4.5_0006659g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 3.5e-97 359.0 198 87.4
Cpa.g.sc32.74 Carica papaya HOM05D004270 ORTHO05D005037 8.2e-91 337.8 183 88.5
SHI21470 Sapria himalayana HOM05D004270 ORTHO05D005037 3.3e-84 315.8 278 61.2
Cfa020378 Carpinus fangiana HOM05D004270 ORTHO05D005037 7.2e-79 298.1 241 66.8
CBR_g41577 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-76 290.4 172 78.5
arahy.Tifrunner.gnm1.ann1.06J840 Arachis hypogaea HOM05D004270 ORTHO05D005037 5.9e-73 278.5 194 75.3
Haze_26612 Corylus avellana HOM05D004270 ORTHO05D005037 8.9e-69 264.6 261 50.6
arahy.Tifrunner.gnm1.ann1.IZH1PK Arachis hypogaea HOM05D004270 ORTHO05D005037 1.4e-61 240.7 193 71.0
arahy.Tifrunner.gnm1.ann1.BQF4LJ Arachis hypogaea HOM05D004270 ORTHO05D005037 4.3e-55 219.2 133 84.2
arahy.Tifrunner.gnm1.ann1.C4QR2M Arachis hypogaea HOM05D004270 ORTHO05D005037 4.3e-55 219.2 133 84.2
QL04p092150 Quercus lobata HOM05D004270 ORTHO05D005037 7.3e-39 165.2 142 63.4
MBI10_g05703_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 4.8e-30 136.0 129 59.7
SEGI_39104 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 5.1e-24 115.9 91 63.7
Lsat_1_v5_gn_3_92901 Lactuca sativa HOM05D004270 ORTHO05D005037 8.7e-24 115.2 72 69.4
vmacro07967 Vaccinium macrocarpon HOM05D004270 ORTHO05D007590 1.5e-23 114.4 100 58.0
arahy.Tifrunner.gnm1.ann1.J4JBIL Arachis hypogaea HOM05D004270 ORTHO05D005037 2.8e-22 110.2 88 65.9
arahy.Tifrunner.gnm1.ann1.SB2A23 Arachis hypogaea HOM05D004270 ORTHO05D005037 2.8e-22 110.2 88 65.9
arahy.Tifrunner.gnm1.ann1.8HXD5I Arachis hypogaea HOM05D004270 ORTHO05D005037 1.5e-20 104.4 237 35.0
Lsat_1_v5_gn_2_10621 Lactuca sativa HOM05D004270 ORTHO05D005037 1.5e-20 104.4 64 78.1
SEGI_07848 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 1.0e-16 91.7 51 78.4
RcHm_v2.0_Chr2g0110821 Rosa chinensis HOM05D004270 ORTHO05D005037 8.1e-14 82.0 45 84.4
arahy.Tifrunner.gnm1.ann1.FF7QMU Arachis hypogaea HOM05D004270 ORTHO05D005037 1.5e-12 77.8 45 84.4
FAN12G0414 Fragaria x ananassa HOM05D000835 ORTHO05D035555 1.3e-11 74.7 90 54.4
FAN12G0605 Fragaria x ananassa HOM05D000835 ORTHO05D035555 1.3e-11 74.7 90 54.4
TAR636G1752 Trochodendron aralioides HOM05D004270 ORTHO05D005037 1.8e-08 64.3 39 82.1
Dinv19578 Davidia involucrata HOM05D006464 ORTHO05D007923 8.2e-06 55.5 34 76.5


User provided reference genes

Program Settings