Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.PBP9SE Arachis hypogaea HOM05D008504 ORTHO05D010707 0.0e+00 1286.6 619 100.0
arahy.Tifrunner.gnm1.ann1.UJY401 Arachis hypogaea HOM05D008504 ORTHO05D010707 0.0e+00 1283.9 619 99.7
arahy.Tifrunner.gnm1.ann1.FHH1YD Arachis hypogaea HOM05D008504 ORTHO05D010707 0.0e+00 1142.1 612 89.9
arahy.Tifrunner.gnm1.ann1.A1ZBG7 Arachis hypogaea HOM05D008504 ORTHO05D010707 1.2e-235 820.1 613 68.5
arahy.Tifrunner.gnm1.ann1.QZ4EVV Arachis hypogaea HOM05D008504 ORTHO05D010707 1.5e-235 819.7 613 68.5
arahy.Tifrunner.gnm1.ann1.3X8B6N Arachis hypogaea HOM05D008504 ORTHO05D010707 2.1e-229 799.3 614 68.1
arahy.Tifrunner.gnm1.ann1.WCXU76 Arachis hypogaea HOM05D008504 ORTHO05D010707 8.1e-229 797.3 614 67.8
arahy.Tifrunner.gnm1.ann1.HMY8CZ Arachis hypogaea HOM05D008504 ORTHO05D010707 1.8e-228 796.2 617 68.2
arahy.Tifrunner.gnm1.ann1.DKU1F8 Arachis hypogaea HOM05D008504 ORTHO05D010707 5.8e-227 791.2 606 68.2
arahy.Tifrunner.gnm1.ann1.F5F6FM Arachis hypogaea HOM05D008504 ORTHO05D010707 2.5e-185 652.9 614 58.5
arahy.Tifrunner.gnm1.ann1.B27QWS Arachis hypogaea HOM05D008504 ORTHO05D010707 4.3e-182 642.1 607 57.8
arahy.Tifrunner.gnm1.ann1.NP4SZW Arachis hypogaea HOM05D008504 ORTHO05D010707 2.2e-181 639.8 615 57.7
arahy.Tifrunner.gnm1.ann1.W9IIXQ Arachis hypogaea HOM05D008504 ORTHO05D010707 1.2e-176 624.0 626 54.8
arahy.Tifrunner.gnm1.ann1.00W0BQ Arachis hypogaea HOM05D008504 ORTHO05D010707 2.3e-175 619.8 624 56.7
arahy.Tifrunner.gnm1.ann1.J252LG Arachis hypogaea HOM05D008504 ORTHO05D010707 2.3e-175 619.8 586 57.8
arahy.Tifrunner.gnm1.ann1.MCNZ84 Arachis hypogaea HOM05D008504 ORTHO05D010707 2.3e-175 619.8 624 56.7
arahy.Tifrunner.gnm1.ann1.5E9NVZ Arachis hypogaea HOM05D008504 ORTHO05D010707 5.1e-175 618.6 621 56.8
arahy.Tifrunner.gnm1.ann1.QMM8JA Arachis hypogaea HOM05D008504 ORTHO05D010707 1.6e-152 543.9 613 50.1
arahy.Tifrunner.gnm1.ann1.DST42P Arachis hypogaea HOM05D008504 ORTHO05D010707 3.0e-151 539.7 525 56.6
arahy.Tifrunner.gnm1.ann1.K73WW4 Arachis hypogaea HOM05D008504 ORTHO05D010707 1.7e-149 533.9 247 100.0
arahy.Tifrunner.gnm1.ann1.BZE4S9 Arachis hypogaea HOM05D008504 ORTHO05D010707 4.1e-148 529.3 620 51.1
arahy.Tifrunner.gnm1.ann1.2PI4SD Arachis hypogaea HOM05D008504 ORTHO05D010707 1.2e-142 511.1 619 48.5
arahy.Tifrunner.gnm1.ann1.3HSW25 Arachis hypogaea HOM05D008504 ORTHO05D010707 1.2e-142 511.1 619 48.5
arahy.Tifrunner.gnm1.ann1.ERGP6F Arachis hypogaea HOM05D008504 ORTHO05D010707 1.5e-142 510.8 624 49.4
arahy.Tifrunner.gnm1.ann1.XQPR1E Arachis hypogaea HOM05D008504 ORTHO05D010707 5.7e-142 508.8 469 59.7
arahy.Tifrunner.gnm1.ann1.D90TM1 Arachis hypogaea HOM05D008504 ORTHO05D010707 9.2e-140 501.5 625 47.4
arahy.Tifrunner.gnm1.ann1.CY9GMY Arachis hypogaea HOM05D008504 ORTHO05D010707 7.5e-134 481.9 624 47.9
arahy.Tifrunner.gnm1.ann1.0E19IK Arachis hypogaea HOM05D008504 ORTHO05D010707 1.7e-133 480.7 627 47.5
arahy.Tifrunner.gnm1.ann1.HCH4H8 Arachis hypogaea HOM05D008504 ORTHO05D010707 1.4e-127 461.1 617 44.9
arahy.Tifrunner.gnm1.ann1.XH95LH Arachis hypogaea HOM05D008504 ORTHO05D010707 1.4e-127 461.1 617 44.9
arahy.Tifrunner.gnm1.ann1.5RQB9J Arachis hypogaea HOM05D008504 ORTHO05D010707 1.7e-125 454.1 615 45.0
arahy.Tifrunner.gnm1.ann1.PE8RGD Arachis hypogaea HOM05D008504 ORTHO05D010707 1.7e-125 454.1 615 45.0
arahy.Tifrunner.gnm1.ann1.EY8LTQ Arachis hypogaea HOM05D008504 ORTHO05D010707 6.0e-123 445.7 534 47.8
arahy.Tifrunner.gnm1.ann1.W613FT Arachis hypogaea HOM05D008504 ORTHO05D010707 7.8e-123 445.3 534 47.9
arahy.Tifrunner.gnm1.ann1.0TG4XQ Arachis hypogaea HOM05D008504 ORTHO05D010707 1.3e-122 444.5 604 45.0
arahy.Tifrunner.gnm1.ann1.2I4AA8 Arachis hypogaea HOM05D008504 ORTHO05D010707 1.3e-122 444.5 604 45.0
arahy.Tifrunner.gnm1.ann1.L2A829 Arachis hypogaea HOM05D008504 ORTHO05D010707 2.1e-112 410.6 472 49.4
arahy.Tifrunner.gnm1.ann1.5K2DU6 Arachis hypogaea HOM05D008504 ORTHO05D010707 4.9e-101 372.9 228 84.6
arahy.Tifrunner.gnm1.ann1.RM5ZHJ Arachis hypogaea HOM05D008504 ORTHO05D010707 1.6e-91 341.3 442 48.4
arahy.Tifrunner.gnm1.ann1.W88FQP Arachis hypogaea HOM05D008504 ORTHO05D010707 1.6e-91 341.3 442 48.4
arahy.Tifrunner.gnm1.ann1.3C5L0V Arachis hypogaea HOM05D008504 ORTHO05D010707 2.6e-78 297.4 366 48.9
arahy.Tifrunner.gnm1.ann1.978BNZ Arachis hypogaea HOM05D008504 ORTHO05D010707 2.6e-78 297.4 366 48.9
arahy.Tifrunner.gnm1.ann1.Y4Q7MJ Arachis hypogaea HOM05D008504 ORTHO05D010707 2.2e-69 267.7 271 52.4
arahy.Tifrunner.gnm1.ann1.E6ECRL Arachis hypogaea HOM05D008504 ORTHO05D010707 1.8e-66 258.1 235 58.7
arahy.Tifrunner.gnm1.ann1.U1D3X5 Arachis hypogaea HOM05D008504 ORTHO05D010707 3.1e-47 194.1 241 49.4
arahy.Tifrunner.gnm1.ann1.0HX70L Arachis hypogaea HOM05D008504 ORTHO05D010707 5.0e-45 186.8 446 31.6
arahy.Tifrunner.gnm1.ann1.2C1SEX Arachis hypogaea HOM05D008504 ORTHO05D010707 5.0e-45 186.8 446 31.6
arahy.Tifrunner.gnm1.ann1.VUCP6Z Arachis hypogaea HOM05D008504 ORTHO05D010707 1.0e-29 136.0 110 63.6
arahy.Tifrunner.gnm1.ann1.K656SJ Arachis hypogaea HOM05D005848 ORTHO05D007532 2.9e-29 134.4 262 40.1
arahy.Tifrunner.gnm1.ann1.R41T5G Arachis hypogaea HOM05D005848 ORTHO05D007532 2.9e-29 134.4 262 40.1
arahy.Tifrunner.gnm1.ann1.B18DRP Arachis hypogaea HOM05D005848 ORTHO05D007532 6.6e-29 133.3 262 39.7
arahy.Tifrunner.gnm1.ann1.U1EDB6 Arachis hypogaea HOM05D005848 ORTHO05D007532 9.5e-28 129.4 259 39.4
PGR042G2769 Punica granatum HOM05D008504 ORTHO05D010707 8.9e-26 122.9 254 35.4
Prupe.1G379500 Prunus persica HOM05D005848 ORTHO05D007532 5.7e-25 120.2 256 35.9
MD08G1031900 Malus domestica HOM05D005848 ORTHO05D007532 2.2e-24 118.2 255 37.6
arahy.Tifrunner.gnm1.ann1.CID1M7 Arachis hypogaea HOM05D008504 ORTHO05D010707 2.8e-24 117.9 65 86.2
CiPaw.16G056600 Carya illinoinensis HOM05D005848 ORTHO05D007532 3.7e-24 117.5 263 35.7
MD15G1027800 Malus domestica HOM05D005848 ORTHO05D007532 6.3e-24 116.7 247 38.5
Haze_17969 Corylus avellana HOM05D005848 ORTHO05D007532 3.1e-23 114.4 258 36.0
Actinidia15328 Actinidia chinensis HOM05D005848 ORTHO05D007532 1.2e-22 112.5 171 39.8
FAN27G0156 Fragaria x ananassa HOM05D005848 ORTHO05D007532 4.5e-22 110.5 262 35.5
TAR381G1506 Trochodendron aralioides HOM05D005848 ORTHO05D007532 7.8e-22 109.8 251 36.7
arahy.Tifrunner.gnm1.ann1.QHI3M9 Arachis hypogaea HOM05D008504 ORTHO05D010707 1.3e-21 109.0 100 56.0
QL02p008596 Quercus lobata HOM05D005848 ORTHO05D007532 1.7e-21 108.6 234 34.6
Thecc.08G026700 Theobroma cacao HOM05D005848 ORTHO05D007532 1.7e-21 108.6 230 35.2
FAN20G0176 Fragaria x ananassa HOM05D005848 ORTHO05D007532 2.3e-21 108.2 241 36.1
FAN20G3094 Fragaria x ananassa HOM05D005848 ORTHO05D007532 2.3e-21 108.2 241 36.1
BraA07t30539Z Brassica rapa HOM05D005848 ORTHO05D007532 2.9e-21 107.8 197 39.1
Gohir.A01G115800 Gossypium hirsutum HOM05D005848 ORTHO05D007532 3.8e-21 107.5 197 36.5
FAN15G3081 Fragaria x ananassa HOM05D005848 ORTHO05D007532 5.0e-21 107.1 240 36.2
A07p28980 Brassica napus HOM05D005848 ORTHO05D007532 1.1e-20 105.9 197 38.6
FvH4_2g39810 Fragaria vesca HOM05D005848 ORTHO05D007532 1.1e-20 105.9 236 34.3
Ah.05g173260 Amaranthus hybridus HOM05D005848 ORTHO05D007532 1.5e-20 105.5 222 36.0
AL2G35110 Arabidopsis lyrata HOM05D005848 ORTHO05D007532 1.5e-20 105.5 215 33.0
Cfa018151 Carpinus fangiana HOM05D005848 ORTHO05D007532 2.5e-20 104.8 266 33.5
Gohir.D01G104100 Gossypium hirsutum HOM05D005848 ORTHO05D007532 2.5e-20 104.8 233 34.8
Gorai.002G128000 Gossypium raimondii HOM05D005848 ORTHO05D007532 2.5e-20 104.8 233 34.8
Rhsim07G0239300 Rhododendron simsii HOM05D005848 ORTHO05D007532 2.5e-20 104.8 262 34.4
Psat6g008800 Pisum sativum HOM05D005848 ORTHO05D007532 4.3e-20 104.0 165 40.0
Aqoxy6G01108 Aquilegia oxysepala HOM05D005848 ORTHO05D007532 5.6e-20 103.6 194 37.1
AUR62023420 Chenopodium quinoa HOM05D005848 ORTHO05D007532 5.6e-20 103.6 228 34.6
EL10Ac1g00774 Beta vulgaris HOM05D005848 ORTHO05D007532 7.3e-20 103.2 259 33.6
A07p40790 Brassica napus HOM05D005848 ORTHO05D007532 7.3e-20 103.2 167 38.3
BraA07t31621Z Brassica rapa HOM05D005848 ORTHO05D007532 7.3e-20 103.2 167 38.3
Duzib116G0609 Durio zibethinus HOM05D005848 ORTHO05D007532 7.3e-20 103.2 252 33.7
Glyma.14G075000 Glycine max HOM05D005848 ORTHO05D007532 7.3e-20 103.2 263 37.6
Lalb_Chr14g0369301 Lupinus albus HOM05D005848 ORTHO05D007532 7.3e-20 103.2 231 35.1
TWI56G0568 Tripterygium wilfordii HOM05D005848 ORTHO05D007532 9.5e-20 102.8 227 35.2
PSO675G8513 Papaver somniferum HOM05D005848 ORTHO05D007532 1.2e-19 102.4 236 32.6
AUR62013733 Chenopodium quinoa HOM05D005848 ORTHO05D007532 1.6e-19 102.1 231 33.8
ClCG08G015110 Citrullus lanatus HOM05D005848 ORTHO05D007532 1.6e-19 102.1 187 36.4
Thhalv10018304m.g Eutrema salsugineum HOM05D005848 ORTHO05D007532 1.6e-19 102.1 204 33.8
Lj5g0008078 Lotus japonicus HOM05D005848 ORTHO05D007532 2.1e-19 101.7 229 37.6
RcHm_v2.0_Chr6g0301031 Rosa chinensis HOM05D005848 ORTHO05D007532 2.8e-19 101.3 249 35.3
Sed0003570 Sechium edule HOM05D005848 ORTHO05D007532 2.8e-19 101.3 237 34.6
Lj4A40T46 Lonicera japonica HOM05D005848 ORTHO05D007532 3.6e-19 100.9 169 37.3
BolC6t39951H Brassica oleracea HOM05D005848 ORTHO05D007532 4.7e-19 100.5 167 37.7
CsaV3_2G028680 Cucumis sativus L. HOM05D005848 ORTHO05D007532 4.7e-19 100.5 247 34.8
Medtr1g022235 Medicago truncatula HOM05D005848 ORTHO05D007532 4.7e-19 100.5 220 35.9
Hund17082 Selenicereus undatus HOM05D005848 ORTHO05D007532 4.7e-19 100.5 237 33.8
VMungo0647G1182 Vigna mungo HOM05D005848 ORTHO05D007532 4.7e-19 100.5 238 34.0
MSTRG.1277 Avicennia marina HOM05D005848 ORTHO05D007532 6.1e-19 100.1 211 35.5
C06p49180 Brassica napus HOM05D005848 ORTHO05D007532 6.1e-19 100.1 167 37.1
CANSAT35G0174 Cannabis sativa HOM05D005848 ORTHO05D007532 8.0e-19 99.8 200 36.5
COL.COLO4_26317 Corchorus olitorius HOM05D005848 ORTHO05D007532 8.0e-19 99.8 152 40.8
Nn1g04993 Nelumbo nucifera HOM05D005848 ORTHO05D007532 8.0e-19 99.8 240 32.5
PSO541G0294 Papaver somniferum HOM05D005848 ORTHO05D007532 8.0e-19 99.8 250 34.0
Cpa.g.sc36.76 Carica papaya HOM05D005848 ORTHO05D007532 1.0e-18 99.4 256 34.8
Phvul.001G014532 Phaseolus vulgaris HOM05D005848 ORTHO05D007532 1.4e-18 99.0 229 34.5
Sp5g30360 Schrenkiella parvula HOM05D005848 ORTHO05D007532 2.3e-18 98.2 210 33.8
Eucgr.F01897 Eucalyptus grandis HOM05D005848 ORTHO05D007532 3.0e-18 97.8 243 35.4
Manes.18G027000 Manihot esculenta HOM05D005848 ORTHO05D007532 3.0e-18 97.8 252 33.3
Ca_13375_v3 Cicer arietinum L. HOM05D005848 ORTHO05D007532 5.2e-18 97.1 165 38.8
Glyma.17G250400 Glycine max HOM05D005848 ORTHO05D007532 5.2e-18 97.1 265 34.7
Peaxi162Scf00417g01212 Petunia axillaris HOM05D005848 ORTHO05D007532 8.9e-18 96.3 229 33.6
Solyc04g080340.3 Solanum lycopersicum HOM05D005848 ORTHO05D007532 8.9e-18 96.3 258 34.1
Carub.0002s2201 Capsella rubella HOM05D005848 ORTHO05D007532 1.2e-17 95.9 215 30.7
Migut.C00727 Erythranthe guttata HOM05D005848 ORTHO05D007532 1.2e-17 95.9 224 37.1
TWI36G0400 Tripterygium wilfordii HOM05D005848 ORTHO05D007532 1.2e-17 95.9 242 33.1
AT1G75200 Arabidopsis thaliana HOM05D005848 ORTHO05D007532 1.5e-17 95.5 218 31.7
DCAR_020974 Daucus carota HOM05D005848 ORTHO05D007532 1.5e-17 95.5 190 35.3
Nitab4.5_0005373g0030 Nicotiana tabacum HOM05D005848 ORTHO05D007532 1.5e-17 95.5 254 33.5
Potri.002G260700 Populus trichocarpa HOM05D005848 ORTHO05D007532 2.0e-17 95.1 220 33.6
PGR031G0193 Punica granatum HOM05D005848 ORTHO05D007532 2.0e-17 95.1 165 39.4
Sc02g0006150 Simmondsia chinensis HOM05D005848 ORTHO05D007532 2.0e-17 95.1 252 31.0
Sopen04g033930 Solanum pennellii HOM05D005848 ORTHO05D007532 2.0e-17 95.1 263 33.5
vmacro11198 Vaccinium macrocarpon HOM05D005848 ORTHO05D007532 2.0e-17 95.1 239 35.1
MELO3C010940.2 Cucumis melo HOM05D005848 ORTHO05D007532 2.6e-17 94.7 229 33.2
Lsat_1_v5_gn_1_17721 Lactuca sativa HOM05D005848 ORTHO05D007532 2.6e-17 94.7 248 32.3
vmacro04526 Vaccinium macrocarpon HOM05D005848 ORTHO05D007532 3.4e-17 94.4 241 34.4
Aa31LG4G5410 Aethionema arabicum HOM05D005848 ORTHO05D007532 4.4e-17 94.0 243 30.9
Sabra02G0198400 Salix brachista HOM05D005848 ORTHO05D007532 4.4e-17 94.0 235 33.6
THA.LOC104809061 Tarenaya hassleriana HOM05D005848 ORTHO05D007532 5.8e-17 93.6 207 31.9
Cc10_g02880 Coffea canephora HOM05D005848 ORTHO05D007532 7.5e-17 93.2 243 32.9
PGSC0003DMG400004542 Solanum tuberosum HOM05D005848 ORTHO05D007532 7.5e-17 93.2 212 36.3
unitig_37.g12994 Utricularia gibba HOM05D005848 ORTHO05D007532 7.5e-17 93.2 246 33.7
SGA_v2.0_scaffold54G19521 Striga asiatica HOM05D005848 ORTHO05D007532 9.8e-17 92.8 266 33.5
Dinv36081 Davidia involucrata HOM05D005848 ORTHO05D007532 1.3e-16 92.4 231 31.6
Nitab4.5_0006280g0010 Nicotiana tabacum HOM05D005848 ORTHO05D007532 1.3e-16 92.4 208 35.1
TPR.G20173 Trifolium pratense HOM05D005848 ORTHO05D007532 2.2e-16 91.7 174 36.2
CDE01G0181 Ceratophyllum demersum HOM05D005848 ORTHO05D007532 4.9e-16 90.5 233 32.2
HanXRQChr02g0042111 Helianthus annuus HOM05D005848 ORTHO05D007532 6.4e-16 90.1 218 32.6
CARHR068530 Cardamine hirsuta HOM05D005848 ORTHO05D007532 8.3e-16 89.7 210 31.9
Pp3c8_14160 Physcomitrium patens HOM05D005848 ORTHO05D007532 2.4e-15 88.2 168 33.9
CAN.G1226.12 Capsicum annuum HOM05D005848 ORTHO05D007532 3.2e-15 87.8 250 32.8
MBI16_g31221_MAGBIO Magnolia biondii HOM05D005848 ORTHO05D007532 4.1e-15 87.4 209 32.5
Mapoly0010s0191 Marchantia polymorpha HOM05D005848 ORTHO05D007532 1.2e-14 85.9 228 29.4
SalBow7G2715 Salvia bowleyana HOM05D005848 ORTHO05D007532 1.2e-14 85.9 257 32.3
HPP92_012274 Vanilla planifolia HOM05D005848 ORTHO05D007532 3.5e-14 84.3 224 31.7
Oeu049954.1 Olea europaea HOM05D005848 ORTHO05D007532 4.6e-14 84.0 233 33.5
CiPaw.16G057000 Carya illinoinensis HOM05D005848 ORTHO05D007532 5.0e-13 80.5 204 34.3
SMO119G0034 Selaginella moellendorffii HOM05D005848 ORTHO05D007532 5.0e-13 80.5 199 30.7
Ciclev10003946m.g Citrus clementina HOM05D005848 ORTHO05D007532 2.5e-12 78.2 175 33.1
Sed0016731 Sechium edule HOM05D005848 ORTHO05D007532 7.3e-12 76.6 174 37.9
ATR0733G119 Amborella trichopoda HOM05D005848 ORTHO05D007532 1.2e-11 75.9 126 38.1
CBR_g26428 Chara braunii HOM05D005848 ORTHO05D007532 2.1e-11 75.1 192 29.2
ECA247G2683 Erigeron canadensis HOM05D005848 ORTHO05D007532 1.1e-10 72.8 244 30.3
AagrBONN_evm.TU.Sc2ySwM_362.2225 Anthoceros agrestis HOM05D005848 ORTHO05D007532 2.3e-10 71.6 228 26.8
arahy.Tifrunner.gnm1.ann1.1X0C2C Arachis hypogaea HOM05D000092 ORTHO05D000042 8.9e-10 69.7 43 69.8
CSS0029553 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 1.1e-07 62.8 248 24.6
Zm00001eb059170 Zea mays HOM05D005848 ORTHO05D007532 1.1e-07 62.8 219 28.8
CSS0006033 Camellia sinensis var. sinensis HOM05D005848 ORTHO05D007532 9.2e-07 59.7 101 37.6


User provided reference genes

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