Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.P0BYU6 Arachis hypogaea HOM05D003738 ORTHO05D005143 1.3e-146 523.1 264 100.0
arahy.Tifrunner.gnm1.ann1.KYQ4XK Arachis hypogaea HOM05D003738 ORTHO05D005143 2.3e-63 246.5 213 63.8
arahy.Tifrunner.gnm1.ann1.UI9B1P Arachis hypogaea HOM05D003738 ORTHO05D005143 5.6e-62 241.9 213 63.4
arahy.Tifrunner.gnm1.ann1.95JV46 Arachis hypogaea HOM05D003738 ORTHO05D005143 2.9e-58 229.6 224 58.9
Lj2g0012793 Lotus japonicus HOM05D003738 ORTHO05D005143 4.1e-57 225.7 213 58.7
CANSAT78G1141 Cannabis sativa HOM05D003738 ORTHO05D005143 2.7e-56 223.0 213 57.7
Cpa.g.sc170.16 Carica papaya HOM05D003738 ORTHO05D005143 1.0e-55 221.1 213 58.2
Eucgr.F02797 Eucalyptus grandis HOM05D003738 ORTHO05D005143 1.0e-55 221.1 213 56.8
Gohir.A11G166650 Gossypium hirsutum HOM05D003738 ORTHO05D005143 3.0e-55 219.5 213 58.7
Gorai.007G185300 Gossypium raimondii HOM05D003738 ORTHO05D005143 3.0e-55 219.5 213 58.7
Gohir.D11G173000 Gossypium hirsutum HOM05D003738 ORTHO05D005143 6.6e-55 218.4 213 58.2
TPR.G25203 Trifolium pratense HOM05D003738 ORTHO05D005143 6.6e-55 218.4 214 58.4
Carub.0006s1559 Capsella rubella HOM05D003738 ORTHO05D005143 8.6e-55 218.0 213 54.9
Glyma.02G238800 Glycine max HOM05D003738 ORTHO05D005143 8.6e-55 218.0 213 56.3
Atru.chr1.1579 Acer truncatum HOM05D003738 ORTHO05D005143 2.5e-54 216.5 215 56.3
Glyma.14G207700 Glycine max HOM05D003738 ORTHO05D005143 2.5e-54 216.5 213 56.3
Ciclev10011371m.g Citrus clementina HOM05D003738 ORTHO05D005143 3.3e-54 216.1 213 56.3
Lalb_Chr02g0160571 Lupinus albus HOM05D003738 ORTHO05D005143 3.3e-54 216.1 213 56.3
Sc10g0001020 Simmondsia chinensis HOM05D003738 ORTHO05D005143 4.3e-54 215.7 215 55.3
Actinidia36345 Actinidia chinensis HOM05D003738 ORTHO05D005143 5.6e-54 215.3 213 57.3
Ca_04135_v3 Cicer arietinum L. HOM05D003738 ORTHO05D005143 5.6e-54 215.3 213 59.2
Lj2A438T57 Lonicera japonica HOM05D003738 ORTHO05D005143 5.6e-54 215.3 215 55.3
Phvul.008G243200 Phaseolus vulgaris HOM05D003738 ORTHO05D005143 5.6e-54 215.3 213 56.3
Psat1g052800 Pisum sativum HOM05D003738 ORTHO05D005143 9.5e-54 214.5 214 57.9
Potri.004G094600 Populus trichocarpa HOM05D003738 ORTHO05D005143 1.6e-53 213.8 215 56.3
RcHm_v2.0_Chr3g0494041 Rosa chinensis HOM05D003738 ORTHO05D005143 1.6e-53 213.8 213 55.4
THA.LOC104820853 Tarenaya hassleriana HOM05D003738 ORTHO05D005143 1.6e-53 213.8 213 54.9
VMungo0647G1516 Vigna mungo HOM05D003738 ORTHO05D005143 1.6e-53 213.8 213 56.3
Duzib133G1513 Durio zibethinus HOM05D003738 ORTHO05D005143 2.1e-53 213.4 212 58.5
Nitab4.5_0007290g0010 Nicotiana tabacum HOM05D003738 ORTHO05D005143 2.1e-53 213.4 215 56.3
Nitab4.5_0011323g0010 Nicotiana tabacum HOM05D003738 ORTHO05D005143 2.1e-53 213.4 215 56.3
Sabra04G0063900 Salix brachista HOM05D003738 ORTHO05D005143 2.8e-53 213.0 215 56.3
BcaC04g18797 Brassica carinata HOM05D003738 ORTHO05D005143 3.6e-53 212.6 213 55.4
Lalb_Chr06g0176761 Lupinus albus HOM05D003738 ORTHO05D005143 3.6e-53 212.6 213 55.9
A10p22030 Brassica napus HOM05D003738 ORTHO05D005143 4.7e-53 212.2 213 55.9
BraA10t44260Z Brassica rapa HOM05D003738 ORTHO05D005143 4.7e-53 212.2 213 55.9
COL.COLO4_27155 Corchorus olitorius HOM05D003738 ORTHO05D005143 4.7e-53 212.2 213 55.9
Thhalv10013104m.g Eutrema salsugineum HOM05D003738 ORTHO05D005143 4.7e-53 212.2 213 55.4
BolC9t58818H Brassica oleracea HOM05D003738 ORTHO05D005143 6.2e-53 211.8 213 55.4
Rhsim10G0076800 Rhododendron simsii HOM05D003738 ORTHO05D005143 6.2e-53 211.8 223 56.5
TWI77G0590 Tripterygium wilfordii HOM05D003738 ORTHO05D005143 6.2e-53 211.8 213 55.9
Zm00001eb336870 Zea mays HOM05D003738 ORTHO05D005143 6.2e-53 211.8 213 55.4
Nitab4.5_0002456g0020 Nicotiana tabacum HOM05D003738 ORTHO05D005143 8.1e-53 211.5 215 55.8
TAR374G1203 Trochodendron aralioides HOM05D003738 ORTHO05D005143 8.1e-53 211.5 215 54.4
C09p59780 Brassica napus HOM05D003738 ORTHO05D005143 1.1e-52 211.1 213 55.4
AUR62023263 Chenopodium quinoa HOM05D003738 ORTHO05D005143 1.1e-52 211.1 215 54.4
Manes.01G113700 Manihot esculenta HOM05D003738 ORTHO05D005143 1.1e-52 211.1 215 55.8
Nn4g24034 Nelumbo nucifera HOM05D003738 ORTHO05D005143 1.4e-52 210.7 215 53.5
vmacro05488 Vaccinium macrocarpon HOM05D003738 ORTHO05D005143 1.4e-52 210.7 215 55.8
Ah.16g101450 Amaranthus hybridus HOM05D003738 ORTHO05D005143 1.8e-52 210.3 215 54.9
CAN.G625.63 Capsicum annuum HOM05D003738 ORTHO05D005143 1.8e-52 210.3 215 54.4
CARHR195830 Cardamine hirsuta HOM05D003738 ORTHO05D005143 1.8e-52 210.3 213 54.5
FvH4_1g28990 Fragaria vesca HOM05D003738 ORTHO05D005143 1.8e-52 210.3 215 54.0
FAN19G0768 Fragaria x ananassa HOM05D003738 ORTHO05D005143 1.8e-52 210.3 215 54.0
FAN23G1334 Fragaria x ananassa HOM05D003738 ORTHO05D005143 1.8e-52 210.3 215 54.0
FAN26G1505 Fragaria x ananassa HOM05D003738 ORTHO05D005143 1.8e-52 210.3 215 54.0
Prupe.3G150000 Prunus persica HOM05D003738 ORTHO05D005143 1.8e-52 210.3 215 55.3
AL6G28450 Arabidopsis lyrata HOM05D003738 ORTHO05D005143 2.3e-52 209.9 215 55.3
AUR62023216 Chenopodium quinoa HOM05D003738 ORTHO05D005143 2.3e-52 209.9 215 54.0
Medtr6g004200 Medicago truncatula HOM05D003738 ORTHO05D005143 2.3e-52 209.9 214 57.0
CsaV3_4G010390 Cucumis sativus L. HOM05D003738 ORTHO05D005143 3.1e-52 209.5 213 54.0
Aqoxy3G00165 Aquilegia oxysepala HOM05D003738 ORTHO05D005143 4.0e-52 209.1 213 55.9
ClCG07G016430 Citrullus lanatus HOM05D003738 ORTHO05D005143 4.0e-52 209.1 213 53.5
MELO3C010381.2 Cucumis melo HOM05D003738 ORTHO05D005143 4.0e-52 209.1 213 54.5
Peaxi162Scf00129g00317 Petunia axillaris HOM05D003738 ORTHO05D005143 4.0e-52 209.1 215 54.0
Sed0022193 Sechium edule HOM05D003738 ORTHO05D005143 4.0e-52 209.1 215 54.9
Hund13699 Selenicereus undatus HOM05D003738 ORTHO05D005143 4.0e-52 209.1 215 54.4
Sopen02g035750 Solanum pennellii HOM05D003738 ORTHO05D005143 4.0e-52 209.1 215 54.4
Cc07_g08440 Coffea canephora HOM05D003738 ORTHO05D005143 5.2e-52 208.8 215 53.5
MD00G1054500 Malus domestica HOM05D003738 ORTHO05D005143 5.2e-52 208.8 213 54.9
Peaxi162Scf00458g00011 Petunia axillaris HOM05D003738 ORTHO05D005143 5.2e-52 208.8 215 54.0
TWI74G0253 Tripterygium wilfordii HOM05D003738 ORTHO05D005143 5.2e-52 208.8 215 55.3
Duzib138G1092 Durio zibethinus HOM05D003738 ORTHO05D005143 6.8e-52 208.4 213 55.4
ECA238G0020 Erigeron canadensis HOM05D003738 ORTHO05D005143 6.8e-52 208.4 215 54.9
Solyc02g091100.3 Solanum lycopersicum HOM05D003738 ORTHO05D005143 6.8e-52 208.4 215 54.4
PGSC0003DMG400030633 Solanum tuberosum HOM05D003738 ORTHO05D005143 6.8e-52 208.4 215 54.4
HanXRQChr07g0193781 Helianthus annuus HOM05D003738 ORTHO05D005143 8.9e-52 208.0 215 54.0
Sp6g26840 Schrenkiella parvula HOM05D003738 ORTHO05D005143 8.9e-52 208.0 213 54.5
COL.COLO4_12270 Corchorus olitorius HOM05D003738 ORTHO05D005143 1.5e-51 207.2 234 53.8
MD09G1258100 Malus domestica HOM05D003738 ORTHO05D005143 1.5e-51 207.2 215 55.3
QL02p049823 Quercus lobata HOM05D003738 ORTHO05D005143 1.5e-51 207.2 220 54.5
MSTRG.15310 Avicennia marina HOM05D003738 ORTHO05D005143 2.0e-51 206.8 217 54.4
HPP92_003826 Vanilla planifolia HOM05D003738 ORTHO05D005143 2.0e-51 206.8 213 54.5
AT5G17380 Arabidopsis thaliana HOM05D003738 ORTHO05D005143 2.6e-51 206.5 215 54.9
Migut.L00189 Erythranthe guttata HOM05D003738 ORTHO05D005143 2.6e-51 206.5 215 54.0
SGA_v2.0_scaffold329G48870 Striga asiatica HOM05D003738 ORTHO05D005143 3.4e-51 206.1 215 53.0
BcaB08g36776 Brassica carinata HOM05D003738 ORTHO05D005143 7.6e-51 204.9 213 54.0
EL10Ac2g04518 Beta vulgaris HOM05D003738 ORTHO05D005143 2.2e-50 203.4 237 51.9
PSO017G1959 Papaver somniferum HOM05D003738 ORTHO05D005143 3.7e-50 202.6 213 53.5
MBI16_g21165_MAGBIO Magnolia biondii HOM05D003738 ORTHO05D005143 6.4e-50 201.8 213 54.0
PSO170G1643 Papaver somniferum HOM05D003738 ORTHO05D005143 8.4e-50 201.4 213 53.5
PSO455G0115 Papaver somniferum HOM05D003738 ORTHO05D005143 1.9e-49 200.3 213 53.1
Aa31LG11G12270 Aethionema arabicum HOM05D003738 ORTHO05D005143 4.1e-49 199.1 215 53.5
Cfa007882 Carpinus fangiana HOM05D003738 ORTHO05D005143 4.1e-49 199.1 213 53.5
SEGI_09825 Sequoiadendron giganteum HOM05D003738 ORTHO05D005143 4.1e-49 199.1 213 52.1
Oeu061823.1 Olea europaea HOM05D003738 ORTHO05D005143 7.1e-49 198.4 215 51.6
Lsat_1_v5_gn_2_80860 Lactuca sativa HOM05D003738 ORTHO05D005143 1.6e-48 197.2 215 51.2
ATR0057G018 Amborella trichopoda HOM05D003738 ORTHO05D005143 6.0e-48 195.3 219 51.1
CiPaw.03G065800 Carya illinoinensis HOM05D003738 ORTHO05D005143 6.0e-48 195.3 213 52.1
SalBow4G0814 Salvia bowleyana HOM05D003738 ORTHO05D005143 6.0e-48 195.3 198 54.0
SHI25638 Sapria himalayana HOM05D003738 ORTHO05D005143 3.0e-47 193.0 216 51.9
CSS0050020 Camellia sinensis var. sinensis HOM05D003738 ORTHO05D005143 3.9e-47 192.6 211 52.6
CDE06G1483 Ceratophyllum demersum HOM05D003738 ORTHO05D005143 8.6e-47 191.4 213 50.7
Rhsim05G0052500 Rhododendron simsii HOM05D003738 ORTHO05D005143 2.5e-46 189.9 209 54.1
Haze_14195 Corylus avellana HOM05D003738 ORTHO05D005143 5.6e-46 188.7 250 48.8
AagrBONN_evm.TU.Sc2ySwM_369.580 Anthoceros agrestis HOM05D003738 ORTHO05D005143 7.3e-46 188.3 212 51.4
Pp3c3_25360 Physcomitrium patens HOM05D003738 ORTHO05D005143 9.6e-46 188.0 216 51.9
Rhsim10G0075800 Rhododendron simsii HOM05D003738 ORTHO05D005143 4.7e-45 185.7 269 46.5
Mapoly0099s0049 Marchantia polymorpha HOM05D003738 ORTHO05D005143 6.8e-44 181.8 212 48.1
SMO196G0015 Selaginella moellendorffii HOM05D003738 ORTHO05D005143 2.1e-40 170.2 208 46.6
Dinv14852 Davidia involucrata HOM05D003738 ORTHO05D005143 1.7e-39 167.2 155 57.4
arahy.Tifrunner.gnm1.ann1.996DKV Arachis hypogaea HOM05D003738 ORTHO05D005143 3.9e-39 166.0 132 67.4
Ciclev10011616m.g Citrus clementina HOM05D003738 ORTHO05D005143 1.5e-38 164.1 131 65.6
arahy.Tifrunner.gnm1.ann1.PVN2ZV Arachis hypogaea HOM05D003738 ORTHO05D021496 5.6e-38 162.2 142 63.4
Thecc.04G126300 Theobroma cacao HOM05D003738 ORTHO05D005143 2.8e-37 159.8 131 65.6
Os01g0505400 Oryza sativa ssp. japonica HOM05D003738 ORTHO05D005143 3.1e-36 156.4 131 64.1
arahy.Tifrunner.gnm1.ann1.SAWF7B Arachis hypogaea HOM05D003738 ORTHO05D021496 4.0e-36 156.0 162 57.4
DCAR_025892 Daucus carota HOM05D003738 ORTHO05D005143 4.0e-36 156.0 131 64.9
arahy.Tifrunner.gnm1.ann1.8AFI1C Arachis hypogaea HOM05D003738 ORTHO05D005143 9.0e-36 154.8 182 50.0
arahy.Tifrunner.gnm1.ann1.RD77R5 Arachis hypogaea HOM05D003738 ORTHO05D021496 2.0e-35 153.7 164 56.7
TAR629G2166 Trochodendron aralioides HOM05D003738 ORTHO05D005143 4.9e-26 122.5 211 37.4
Rhsim10G0074000 Rhododendron simsii HOM05D003738 ORTHO05D005143 2.1e-24 117.1 198 41.9
Rhsim10G0075200 Rhododendron simsii HOM05D003738 ORTHO05D005143 3.9e-23 112.8 144 50.0
Rhsim10G0076600 Rhododendron simsii HOM05D003738 ORTHO05D005143 1.1e-22 111.3 131 52.7
CAN.G1019.3 Capsicum annuum HOM05D003738 ORTHO05D005143 1.9e-22 110.5 127 50.4
MD16G1277100 Malus domestica HOM05D003738 ORTHO05D005234 1.3e-21 107.8 109 57.8
arahy.Tifrunner.gnm1.ann1.J2B3IW Arachis hypogaea HOM05D003738 ORTHO05D005143 1.6e-21 107.5 102 55.9
CBR_g39223 Chara braunii HOM05D003738 ORTHO05D005143 5.3e-20 102.4 137 42.3
arahy.Tifrunner.gnm1.ann1.S5LGPQ Arachis hypogaea HOM05D003738 ORTHO05D005143 4.5e-19 99.4 94 57.4
Zm00001eb155100 Zea mays HOM05D003738 ORTHO05D005143 2.2e-18 97.1 128 48.4
arahy.Tifrunner.gnm1.ann1.XG2Q3Z Arachis hypogaea HOM05D003738 ORTHO05D005143 5.5e-17 92.4 108 50.0
arahy.Tifrunner.gnm1.ann1.85I739 Arachis hypogaea HOM05D003738 ORTHO05D005143 2.1e-16 90.5 101 57.4
CDE07G0683 Ceratophyllum demersum HOM05D003738 ORTHO05D005143 2.1e-16 90.5 193 33.7
arahy.Tifrunner.gnm1.ann1.86RIW1 Arachis hypogaea HOM05D003738 ORTHO05D005143 1.0e-15 88.2 112 49.1
Rhsim10G0074800 Rhododendron simsii HOM05D003738 ORTHO05D005143 9.6e-14 81.6 187 37.4
PRCOL_00004783 Prasinoderma coloniale HOM05D003738 ORTHO05D005143 3.7e-13 79.7 140 36.4
GSVIVG01030948001 Vitis vinifera HOM05D003738 ORTHO05D005143 1.2e-11 74.7 46 71.7
Rhsim10G0074200 Rhododendron simsii HOM05D003738 ORTHO05D005143 4.5e-11 72.8 71 57.7
Dinv34815 Davidia involucrata HOM05D003738 ORTHO05D005143 7.6e-11 72.0 46 67.4
Ciclev10013371m.g Citrus clementina HOM05D003738 ORTHO05D005143 1.3e-10 71.2 44 72.7
GSVIVG01013575001 Vitis vinifera HOM05D003738 ORTHO05D005143 1.3e-10 71.2 46 67.4
arahy.Tifrunner.gnm1.ann1.2D9IFX Arachis hypogaea HOM05D003738 ORTHO05D000844 5.0e-10 69.3 55 69.1
Zm00001eb381790 Zea mays HOM05D003738 ORTHO05D021496 5.0e-10 69.3 55 67.3
HanXRQChr02g0040721 Helianthus annuus HOM05D003738 ORTHO05D005143 1.4e-09 67.8 46 63.0
Lsat_1_v5_gn_5_125600 Lactuca sativa HOM05D003738 ORTHO05D021496 1.4e-09 67.8 53 64.2
arahy.Tifrunner.gnm1.ann1.E0ZWVI Arachis hypogaea HOM05D003738 ORTHO05D005143 3.2e-09 66.6 44 68.2
arahy.Tifrunner.gnm1.ann1.EHW2CP Arachis hypogaea HOM05D003738 ORTHO05D005143 9.3e-09 65.1 41 68.3
Lsat_1_v5_gn_3_101660 Lactuca sativa HOM05D003738 ORTHO05D021496 1.2e-08 64.7 53 62.3
arahy.Tifrunner.gnm1.ann1.YP6RFP Arachis hypogaea HOM05D003738 ORTHO05D005143 3.6e-08 63.2 44 68.2
Duzib114G0391 Durio zibethinus HOM05D003738 ORTHO05D005143 1.3e-07 61.2 43 69.8
RhsimUnG0182900 Rhododendron simsii HOM05D003738 ORTHO05D005143 2.3e-07 60.5 46 58.7
arahy.Tifrunner.gnm1.ann1.1JV035 Arachis hypogaea HOM05D003738 ORTHO05D084434 6.7e-07 58.9 64 64.1
arahy.Tifrunner.gnm1.ann1.AT2XXE Arachis hypogaea HOM05D003738 ORTHO05D005143 2.5e-06 57.0 154 34.4
arahy.Tifrunner.gnm1.ann1.1HHJ34 Arachis hypogaea HOM05D000007 ORTHO05D000017 3.3e-06 56.6 40 57.5
arahy.Tifrunner.gnm1.ann1.LBEM0G Arachis hypogaea HOM05D003738 ORTHO05D000844 7.4e-06 55.5 38 71.1
arahy.Tifrunner.gnm1.ann1.3J26XN Arachis hypogaea HOM05D003738 ORTHO05D005143 9.7e-06 55.1 41 61.0
CBR_g39224 Chara braunii HOM05D003738 ORTHO05D005143 9.7e-06 55.1 46 54.3


User provided reference genes

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