Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.N2UQDL Arachis hypogaea HOM05D003738 ORTHO05D005143 3.3e-39 164.5 76 100.0
arahy.Tifrunner.gnm1.ann1.S5LGPQ Arachis hypogaea HOM05D003738 ORTHO05D005143 4.4e-28 127.5 74 82.4
arahy.Tifrunner.gnm1.ann1.KYQ4XK Arachis hypogaea HOM05D003738 ORTHO05D005143 7.8e-17 90.1 59 69.5
arahy.Tifrunner.gnm1.ann1.UI9B1P Arachis hypogaea HOM05D003738 ORTHO05D005143 7.8e-17 90.1 59 69.5
arahy.Tifrunner.gnm1.ann1.L98BBS Arachis hypogaea HOM05D003738 ORTHO05D005143 6.6e-16 87.0 64 65.6
Lj2g0012793 Lotus japonicus HOM05D003738 ORTHO05D005143 6.6e-16 87.0 59 67.8
arahy.Tifrunner.gnm1.ann1.3J26XN Arachis hypogaea HOM05D003738 ORTHO05D005143 1.1e-15 86.3 59 67.8
arahy.Tifrunner.gnm1.ann1.86RIW1 Arachis hypogaea HOM05D003738 ORTHO05D005143 1.5e-15 85.9 48 79.2
Ca_04135_v3 Cicer arietinum L. HOM05D003738 ORTHO05D005143 2.5e-15 85.1 59 62.7
TPR.G25203 Trifolium pratense HOM05D003738 ORTHO05D005143 2.5e-15 85.1 59 62.7
Phvul.008G243200 Phaseolus vulgaris HOM05D003738 ORTHO05D005143 7.3e-15 83.6 59 62.7
VMungo0647G1516 Vigna mungo HOM05D003738 ORTHO05D005143 7.3e-15 83.6 59 62.7
Glyma.02G238800 Glycine max HOM05D003738 ORTHO05D005143 9.5e-15 83.2 51 72.5
Glyma.14G207700 Glycine max HOM05D003738 ORTHO05D005143 9.5e-15 83.2 51 72.5
Prupe.3G150000 Prunus persica HOM05D003738 ORTHO05D005143 9.5e-15 83.2 59 64.4
Cpa.g.sc170.16 Carica papaya HOM05D003738 ORTHO05D005143 1.6e-14 82.4 59 64.4
Lalb_Chr06g0176761 Lupinus albus HOM05D003738 ORTHO05D005143 1.6e-14 82.4 59 64.4
Medtr6g004200 Medicago truncatula HOM05D003738 ORTHO05D005143 1.6e-14 82.4 50 72.0
Lalb_Chr02g0160571 Lupinus albus HOM05D003738 ORTHO05D005143 2.1e-14 82.0 59 62.7
Psat1g052800 Pisum sativum HOM05D003738 ORTHO05D005143 2.1e-14 82.0 59 61.0
MD00G1054500 Malus domestica HOM05D003738 ORTHO05D005143 2.8e-14 81.6 59 62.7
MD09G1258100 Malus domestica HOM05D003738 ORTHO05D005143 2.8e-14 81.6 59 59.3
arahy.Tifrunner.gnm1.ann1.XG2Q3Z Arachis hypogaea HOM05D003738 ORTHO05D005143 3.6e-14 81.3 48 75.0
Atru.chr1.1579 Acer truncatum HOM05D003738 ORTHO05D005143 6.2e-14 80.5 59 62.7
COL.COLO4_12270 Corchorus olitorius HOM05D003738 ORTHO05D005143 6.2e-14 80.5 59 64.4
Gohir.D11G173000 Gossypium hirsutum HOM05D003738 ORTHO05D005143 6.2e-14 80.5 59 64.4
QL02p049823 Quercus lobata HOM05D003738 ORTHO05D005143 6.2e-14 80.5 59 62.7
RcHm_v2.0_Chr3g0494041 Rosa chinensis HOM05D003738 ORTHO05D005143 6.2e-14 80.5 59 61.0
CANSAT78G1141 Cannabis sativa HOM05D003738 ORTHO05D005143 8.1e-14 80.1 59 62.7
COL.COLO4_27155 Corchorus olitorius HOM05D003738 ORTHO05D005143 8.1e-14 80.1 59 64.4
Gohir.A11G166650 Gossypium hirsutum HOM05D003738 ORTHO05D005143 8.1e-14 80.1 51 72.5
Gorai.007G185300 Gossypium raimondii HOM05D003738 ORTHO05D005143 8.1e-14 80.1 51 72.5
arahy.Tifrunner.gnm1.ann1.85I739 Arachis hypogaea HOM05D003738 ORTHO05D005143 1.8e-13 79.0 44 75.0
GSVIVG01030948001 Vitis vinifera HOM05D003738 ORTHO05D005143 1.8e-13 79.0 51 68.6
arahy.Tifrunner.gnm1.ann1.TLT49F Arachis hypogaea HOM05D003738 ORTHO05D005143 2.4e-13 78.6 51 70.6
A10p22030 Brassica napus HOM05D003738 ORTHO05D005143 2.4e-13 78.6 59 61.0
C09p59780 Brassica napus HOM05D003738 ORTHO05D005143 2.4e-13 78.6 59 61.0
BraA10t44260Z Brassica rapa HOM05D003738 ORTHO05D005143 2.4e-13 78.6 59 61.0
Cc07_g08440 Coffea canephora HOM05D003738 ORTHO05D005143 2.4e-13 78.6 59 62.7
PSO017G1959 Papaver somniferum HOM05D003738 ORTHO05D005143 2.4e-13 78.6 53 67.9
PSO170G1643 Papaver somniferum HOM05D003738 ORTHO05D005143 2.4e-13 78.6 53 67.9
PSO455G0115 Papaver somniferum HOM05D003738 ORTHO05D005143 2.4e-13 78.6 53 67.9
Carub.0006s1559 Capsella rubella HOM05D003738 ORTHO05D005143 3.1e-13 78.2 59 59.3
Actinidia36345 Actinidia chinensis HOM05D003738 ORTHO05D005143 4.0e-13 77.8 51 68.6
ECA238G0020 Erigeron canadensis HOM05D003738 ORTHO05D005143 4.0e-13 77.8 51 68.6
TWI74G0253 Tripterygium wilfordii HOM05D003738 ORTHO05D005143 4.0e-13 77.8 51 68.6
Aqoxy3G00165 Aquilegia oxysepala HOM05D003738 ORTHO05D005143 5.2e-13 77.4 51 66.7
AT5G17380 Arabidopsis thaliana HOM05D003738 ORTHO05D005143 5.2e-13 77.4 59 59.3
BcaB08g36776 Brassica carinata HOM05D003738 ORTHO05D005143 5.2e-13 77.4 59 59.3
BcaC04g18797 Brassica carinata HOM05D003738 ORTHO05D005143 5.2e-13 77.4 59 59.3
BolC9t58818H Brassica oleracea HOM05D003738 ORTHO05D005143 5.2e-13 77.4 59 59.3
HanXRQChr07g0193781 Helianthus annuus HOM05D003738 ORTHO05D005143 5.2e-13 77.4 51 68.6
Potri.004G094600 Populus trichocarpa HOM05D003738 ORTHO05D005143 5.2e-13 77.4 51 70.6
CSS0050020 Camellia sinensis var. sinensis HOM05D003738 ORTHO05D005143 6.8e-13 77.0 51 68.6
Sabra04G0063900 Salix brachista HOM05D003738 ORTHO05D005143 6.8e-13 77.0 57 64.9
SalBow4G0814 Salvia bowleyana HOM05D003738 ORTHO05D005143 6.8e-13 77.0 51 66.7
TWI77G0590 Tripterygium wilfordii HOM05D003738 ORTHO05D005143 6.8e-13 77.0 51 68.6
Duzib133G1513 Durio zibethinus HOM05D003738 ORTHO05D005143 8.9e-13 76.6 59 59.3
Duzib138G1092 Durio zibethinus HOM05D003738 ORTHO05D005143 8.9e-13 76.6 58 63.8
vmacro05488 Vaccinium macrocarpon HOM05D003738 ORTHO05D005143 8.9e-13 76.6 49 73.5
arahy.Tifrunner.gnm1.ann1.EHW2CP Arachis hypogaea HOM05D003738 ORTHO05D005143 1.2e-12 76.3 44 77.3
CARHR195830 Cardamine hirsuta HOM05D003738 ORTHO05D005143 1.2e-12 76.3 59 57.6
Thhalv10013104m.g Eutrema salsugineum HOM05D003738 ORTHO05D005143 1.2e-12 76.3 51 64.7
Lj2A438T57 Lonicera japonica HOM05D003738 ORTHO05D005143 1.2e-12 76.3 51 66.7
Sp6g26840 Schrenkiella parvula HOM05D003738 ORTHO05D005143 1.2e-12 76.3 59 59.3
TAR374G1203 Trochodendron aralioides HOM05D003738 ORTHO05D005143 1.2e-12 76.3 51 66.7
GSVIVG01013575001 Vitis vinifera HOM05D003738 ORTHO05D005143 1.2e-12 76.3 51 66.7
AL6G28450 Arabidopsis lyrata HOM05D003738 ORTHO05D005143 1.5e-12 75.9 59 57.6
CAN.G625.63 Capsicum annuum HOM05D003738 ORTHO05D005143 1.5e-12 75.9 51 66.7
Cfa007882 Carpinus fangiana HOM05D003738 ORTHO05D005143 1.5e-12 75.9 51 64.7
Ciclev10011371m.g Citrus clementina HOM05D003738 ORTHO05D005143 1.5e-12 75.9 57 63.2
Haze_14195 Corylus avellana HOM05D003738 ORTHO05D005143 1.5e-12 75.9 51 64.7
Lsat_1_v5_gn_2_80860 Lactuca sativa HOM05D003738 ORTHO05D005143 1.5e-12 75.9 51 66.7
Nitab4.5_0007290g0010 Nicotiana tabacum HOM05D003738 ORTHO05D005143 1.5e-12 75.9 51 66.7
Nitab4.5_0011323g0010 Nicotiana tabacum HOM05D003738 ORTHO05D005143 1.5e-12 75.9 51 66.7
Rhsim10G0076800 Rhododendron simsii HOM05D003738 ORTHO05D005143 1.5e-12 75.9 51 68.6
Solyc02g091100.3 Solanum lycopersicum HOM05D003738 ORTHO05D005143 1.5e-12 75.9 51 66.7
Sopen02g035750 Solanum pennellii HOM05D003738 ORTHO05D005143 1.5e-12 75.9 51 66.7
PGSC0003DMG400030633 Solanum tuberosum HOM05D003738 ORTHO05D005143 1.5e-12 75.9 51 66.7
Eucgr.F02797 Eucalyptus grandis HOM05D003738 ORTHO05D005143 2.0e-12 75.5 59 61.0
MSTRG.15310 Avicennia marina HOM05D003738 ORTHO05D005143 3.4e-12 74.7 51 64.7
MBI16_g21165_MAGBIO Magnolia biondii HOM05D003738 ORTHO05D005143 3.4e-12 74.7 51 64.7
Peaxi162Scf00129g00317 Petunia axillaris HOM05D003738 ORTHO05D005143 3.4e-12 74.7 51 64.7
Peaxi162Scf00458g00011 Petunia axillaris HOM05D003738 ORTHO05D005143 3.4e-12 74.7 51 64.7
SEGI_09825 Sequoiadendron giganteum HOM05D003738 ORTHO05D005143 3.4e-12 74.7 51 62.7
Nn4g24034 Nelumbo nucifera HOM05D003738 ORTHO05D005143 4.4e-12 74.3 48 68.8
RhsimUnG0202300 Rhododendron simsii HOM05D003738 ORTHO05D005143 4.4e-12 74.3 48 70.8
Dinv34815 Davidia involucrata HOM05D003738 ORTHO05D005143 5.8e-12 73.9 48 68.8
Zm00001eb336870 Zea mays HOM05D003738 ORTHO05D005143 5.8e-12 73.9 59 57.6
Migut.L00189 Erythranthe guttata HOM05D003738 ORTHO05D005143 9.9e-12 73.2 59 54.2
ATR0057G018 Amborella trichopoda HOM05D003738 ORTHO05D005143 1.3e-11 72.8 56 55.4
Nitab4.5_0002456g0020 Nicotiana tabacum HOM05D003738 ORTHO05D005143 1.3e-11 72.8 51 64.7
FAN26G1505 Fragaria x ananassa HOM05D003738 ORTHO05D005143 1.7e-11 72.4 59 54.2
HPP92_003826 Vanilla planifolia HOM05D003738 ORTHO05D005143 1.7e-11 72.4 59 54.2
Aa31LG11G12270 Aethionema arabicum HOM05D003738 ORTHO05D005143 2.2e-11 72.0 48 66.7
arahy.Tifrunner.gnm1.ann1.8AFI1C Arachis hypogaea HOM05D003738 ORTHO05D005143 2.2e-11 72.0 44 75.0
EL10Ac2g04518 Beta vulgaris HOM05D003738 ORTHO05D005143 2.2e-11 72.0 59 57.6
SGA_v2.0_scaffold329G48870 Striga asiatica HOM05D003738 ORTHO05D005143 2.2e-11 72.0 51 62.7
Dinv14852 Davidia involucrata HOM05D003738 ORTHO05D005143 2.9e-11 71.6 41 75.6
Rhsim10G0075200 Rhododendron simsii HOM05D003738 ORTHO05D005143 2.9e-11 71.6 48 68.8
CDE06G1483 Ceratophyllum demersum HOM05D003738 ORTHO05D005143 3.8e-11 71.2 59 54.2
CDE07G0683 Ceratophyllum demersum HOM05D003738 ORTHO05D005143 3.8e-11 71.2 59 54.2
THA.LOC104820853 Tarenaya hassleriana HOM05D003738 ORTHO05D005143 3.8e-11 71.2 51 62.7
Oeu061823.1 Olea europaea HOM05D003738 ORTHO05D005143 4.9e-11 70.9 48 64.6
Ciclev10013371m.g Citrus clementina HOM05D003738 ORTHO05D005143 6.4e-11 70.5 49 67.3
Manes.01G113700 Manihot esculenta HOM05D003738 ORTHO05D005143 6.4e-11 70.5 59 55.9
Sc10g0001020 Simmondsia chinensis HOM05D003738 ORTHO05D005143 6.4e-11 70.5 59 55.9
Ah.16g101450 Amaranthus hybridus HOM05D003738 ORTHO05D005143 8.4e-11 70.1 59 54.2
FAN23G1334 Fragaria x ananassa HOM05D003738 ORTHO05D005143 8.4e-11 70.1 59 52.5
AUR62023216 Chenopodium quinoa HOM05D003738 ORTHO05D005143 1.1e-10 69.7 59 54.2
AUR62023263 Chenopodium quinoa HOM05D003738 ORTHO05D005143 1.1e-10 69.7 59 54.2
FvH4_1g28990 Fragaria vesca HOM05D003738 ORTHO05D005143 1.4e-10 69.3 59 52.5
FAN19G0768 Fragaria x ananassa HOM05D003738 ORTHO05D005143 1.4e-10 69.3 59 52.5
Sed0022193 Sechium edule HOM05D003738 ORTHO05D005143 1.4e-10 69.3 51 60.8
AagrBONN_evm.TU.Sc2ySwM_369.580 Anthoceros agrestis HOM05D003738 ORTHO05D005143 1.9e-10 68.9 51 58.8
SHI25638 Sapria himalayana HOM05D003738 ORTHO05D005143 1.9e-10 68.9 59 54.2
arahy.Tifrunner.gnm1.ann1.E0ZWVI Arachis hypogaea HOM05D003738 ORTHO05D005143 2.4e-10 68.6 46 67.4
CiPaw.03G065800 Carya illinoinensis HOM05D003738 ORTHO05D005143 2.4e-10 68.6 51 60.8
Mapoly0099s0049 Marchantia polymorpha HOM05D003738 ORTHO05D005143 2.4e-10 68.6 57 54.4
ClCG07G016430 Citrullus lanatus HOM05D003738 ORTHO05D005143 3.2e-10 68.2 51 58.8
CsaV3_4G010390 Cucumis sativus L. HOM05D003738 ORTHO05D005143 3.2e-10 68.2 51 58.8
Rhsim10G0074000 Rhododendron simsii HOM05D003738 ORTHO05D005143 3.2e-10 68.2 51 62.7
HanXRQChr02g0040721 Helianthus annuus HOM05D003738 ORTHO05D005143 4.1e-10 67.8 74 50.0
Rhsim10G0075800 Rhododendron simsii HOM05D003738 ORTHO05D005143 1.2e-09 66.2 51 60.8
Hund13699 Selenicereus undatus HOM05D003738 ORTHO05D005143 1.2e-09 66.2 59 50.8
TAR629G2166 Trochodendron aralioides HOM05D003738 ORTHO05D005143 6.0e-09 63.9 48 58.3
Cpa.g.sc59.42 Carica papaya HOM05D003738 ORTHO05D005143 7.8e-09 63.5 45 66.7
Pp3c3_25360 Physcomitrium patens HOM05D003738 ORTHO05D005143 7.8e-09 63.5 49 59.2
arahy.Tifrunner.gnm1.ann1.ZEW0UV Arachis hypogaea HOM05D003738 ORTHO05D005143 1.0e-08 63.2 41 73.2
MELO3C010381.2 Cucumis melo HOM05D003738 ORTHO05D005143 1.0e-08 63.2 51 54.9
Rhsim05G0052500 Rhododendron simsii HOM05D003738 ORTHO05D005143 1.7e-08 62.4 38 71.1
arahy.Tifrunner.gnm1.ann1.J2B3IW Arachis hypogaea HOM05D003738 ORTHO05D005143 2.3e-08 62.0 44 65.9
Duzib114G0391 Durio zibethinus HOM05D003738 ORTHO05D005143 3.9e-08 61.2 56 51.8
arahy.Tifrunner.gnm1.ann1.SWJ42W Arachis hypogaea HOM05D000157 ORTHO05D003012 2.5e-07 58.5 33 81.8
Rhsim10G0074800 Rhododendron simsii HOM05D003738 ORTHO05D005143 5.6e-07 57.4 39 64.1
RhsimUnG0182900 Rhododendron simsii HOM05D003738 ORTHO05D005143 1.2e-06 56.2 45 60.0


User provided reference genes

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