Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.N198RB Arachis hypogaea HOM05D003151 ORTHO05D003723 3.1e-113 411.8 198 100.0
arahy.Tifrunner.gnm1.ann1.YN7FFH Arachis hypogaea HOM05D003151 ORTHO05D003723 4.2e-38 162.2 93 84.9
TPR.G25452 Trifolium pratense HOM05D003151 ORTHO05D003723 7.2e-22 108.2 150 48.0
Aqoxy7G01240 Aquilegia oxysepala HOM05D003151 ORTHO05D003723 9.4e-22 107.8 152 45.4
Psat7g020200 Pisum sativum HOM05D003151 ORTHO05D003723 4.7e-21 105.5 150 47.3
Rhsim03G0233200 Rhododendron simsii HOM05D003151 ORTHO05D003723 6.1e-21 105.1 183 41.5
vmacro06284 Vaccinium macrocarpon HOM05D003151 ORTHO05D003723 6.1e-21 105.1 120 51.7
Medtr8g101570 Medicago truncatula HOM05D003151 ORTHO05D003723 5.2e-20 102.1 151 45.0
Peaxi162Scf00354g00026 Petunia axillaris HOM05D003151 ORTHO05D003723 1.5e-19 100.5 128 46.9
CAN.G771.2 Capsicum annuum HOM05D003151 ORTHO05D003723 4.4e-19 99.0 126 46.8
Dinv42311 Davidia involucrata HOM05D003151 ORTHO05D003723 5.7e-19 98.6 118 48.3
VMungo0251G0329 Vigna mungo HOM05D003151 ORTHO05D003723 9.8e-19 97.8 120 49.2
Dinv36756 Davidia involucrata HOM05D003151 ORTHO05D003723 1.3e-18 97.4 162 40.7
Nn8g38896 Nelumbo nucifera HOM05D003151 ORTHO05D003723 1.7e-18 97.1 163 42.9
CAN.G371.125 Capsicum annuum HOM05D003151 ORTHO05D003723 2.2e-18 96.7 125 48.0
Cfa003099 Carpinus fangiana HOM05D003151 ORTHO05D003723 2.2e-18 96.7 119 47.1
Glyma.05G222300 Glycine max HOM05D003151 ORTHO05D003723 2.8e-18 96.3 151 45.0
Haze_25901 Corylus avellana HOM05D003151 ORTHO05D003723 3.7e-18 95.9 119 47.1
Lalb_Chr05g0223631 Lupinus albus HOM05D003151 ORTHO05D003723 3.7e-18 95.9 120 48.3
Gohir.D13G199300 Gossypium hirsutum HOM05D003151 ORTHO05D003723 4.8e-18 95.5 120 49.2
MSTRG.17772 Avicennia marina HOM05D003151 ORTHO05D003723 6.3e-18 95.1 121 45.5
Lj2g0012329 Lotus japonicus HOM05D003151 ORTHO05D003723 6.3e-18 95.1 152 43.4
TAR626G1007 Trochodendron aralioides HOM05D003151 ORTHO05D003723 6.3e-18 95.1 161 43.5
Hma1.2p1_0800F.1_g220060 Hydrangea macrophylla HOM05D003151 ORTHO05D003723 8.3e-18 94.7 153 41.8
ATR0716G029 Amborella trichopoda HOM05D003151 ORTHO05D003723 1.4e-17 94.0 168 38.7
Gorai.013G228000 Gossypium raimondii HOM05D003151 ORTHO05D003723 1.4e-17 94.0 120 48.3
TAR383G0148 Trochodendron aralioides HOM05D003151 ORTHO05D003723 1.4e-17 94.0 163 40.5
COL.COLO4_18213 Corchorus olitorius HOM05D003151 ORTHO05D003723 1.8e-17 93.6 120 46.7
THA.LOC104803976 Tarenaya hassleriana HOM05D003151 ORTHO05D003723 1.8e-17 93.6 118 45.8
Cpa.g.c31168 Carica papaya HOM05D003151 ORTHO05D003723 2.4e-17 93.2 120 48.3
Dinv32123 Davidia involucrata HOM05D003151 ORTHO05D003723 2.4e-17 93.2 151 43.7
Manes.01G223600 Manihot esculenta HOM05D003151 ORTHO05D003723 2.4e-17 93.2 119 47.9
Gohir.A13G193500 Gossypium hirsutum HOM05D003151 ORTHO05D003723 3.1e-17 92.8 120 48.3
Nitab4.5_0010222g0030 Nicotiana tabacum HOM05D003151 ORTHO05D003723 3.1e-17 92.8 128 45.3
CsaV3_1G040320 Cucumis sativus L. HOM05D003151 ORTHO05D003723 4.1e-17 92.4 120 46.7
Nn6g35445 Nelumbo nucifera HOM05D003151 ORTHO05D003723 4.1e-17 92.4 152 42.1
CANSAT56G1065 Cannabis sativa HOM05D003151 ORTHO05D003723 5.4e-17 92.0 118 44.9
PGSC0003DMG400007756 Solanum tuberosum HOM05D003151 ORTHO05D003723 5.4e-17 92.0 158 41.8
CSS0011012 Camellia sinensis var. sinensis HOM05D003151 ORTHO05D003723 9.1e-17 91.3 119 44.5
CSS0013498 Camellia sinensis var. sinensis HOM05D003151 ORTHO05D003723 9.1e-17 91.3 119 44.5
CANSAT56G2773 Cannabis sativa HOM05D003151 ORTHO05D003723 9.1e-17 91.3 118 45.8
ECA234G2307 Erigeron canadensis HOM05D003151 ORTHO05D003723 9.1e-17 91.3 155 40.0
Manes.05G000800 Manihot esculenta HOM05D003151 ORTHO05D003723 1.2e-16 90.9 120 49.2
Lj4g0006501 Lotus japonicus HOM05D003151 ORTHO05D003723 1.6e-16 90.5 153 41.8
Nitab4.5_0006935g0010 Nicotiana tabacum HOM05D003151 ORTHO05D003723 1.6e-16 90.5 130 46.2
Sp7g27430 Schrenkiella parvula HOM05D003151 ORTHO05D003723 1.6e-16 90.5 118 44.9
Thecc.09G091100 Theobroma cacao HOM05D003151 ORTHO05D003723 1.6e-16 90.5 120 45.8
AUR62033993 Chenopodium quinoa HOM05D003151 ORTHO05D003723 2.0e-16 90.1 119 47.9
Ca_17403_v3 Cicer arietinum L. HOM05D003151 ORTHO05D003723 2.0e-16 90.1 119 45.4
Lalb_Chr24g0393781 Lupinus albus HOM05D003151 ORTHO05D003723 2.0e-16 90.1 144 41.7
Phvul.002G304000 Phaseolus vulgaris HOM05D003151 ORTHO05D003723 2.0e-16 90.1 119 49.6
ClCG03G015690 Citrullus lanatus HOM05D003151 ORTHO05D003723 2.7e-16 89.7 120 45.8
MELO3C015459.2 Cucumis melo HOM05D003151 ORTHO05D003723 2.7e-16 89.7 120 46.7
Glyma.08G029000 Glycine max HOM05D003151 ORTHO05D003723 2.7e-16 89.7 118 46.6
Peaxi162Scf01318g00001 Petunia axillaris HOM05D003151 ORTHO05D003723 2.7e-16 89.7 121 45.5
Sopen07g011620 Solanum pennellii HOM05D003151 ORTHO05D003723 2.7e-16 89.7 158 41.8
THA.LOC104801882 Tarenaya hassleriana HOM05D003151 ORTHO05D003723 2.7e-16 89.7 123 46.3
Duzib187G1696 Durio zibethinus HOM05D003151 ORTHO05D003723 3.5e-16 89.4 120 43.3
Actinidia25258 Actinidia chinensis HOM05D003151 ORTHO05D003723 4.5e-16 89.0 154 41.6
Lsat_1_v5_gn_7_37501 Lactuca sativa HOM05D003151 ORTHO05D003723 4.5e-16 89.0 118 43.2
Phvul.004G170900 Phaseolus vulgaris HOM05D003151 ORTHO05D003723 5.9e-16 88.6 152 40.1
Psat1g050280 Pisum sativum HOM05D003151 ORTHO05D003723 5.9e-16 88.6 119 48.7
Duzib168G0375 Durio zibethinus HOM05D003151 ORTHO05D003723 7.7e-16 88.2 120 43.3
Gorai.004G284000 Gossypium raimondii HOM05D003151 ORTHO05D003723 1.0e-15 87.8 120 44.2
Carub.0003s3386 Capsella rubella HOM05D003151 ORTHO05D003723 1.3e-15 87.4 119 46.2
Glyma.07G129300 Glycine max HOM05D003151 ORTHO05D003723 1.3e-15 87.4 120 45.0
PGR142G4167 Punica granatum HOM05D003151 ORTHO05D003723 1.3e-15 87.4 191 36.6
AUR62027484 Chenopodium quinoa HOM05D003151 ORTHO05D003723 1.7e-15 87.0 119 47.1
Ca_25622_v3 Cicer arietinum L. HOM05D003151 ORTHO05D003723 1.7e-15 87.0 120 45.8
Eucgr.C00902 Eucalyptus grandis HOM05D003151 ORTHO05D003723 1.7e-15 87.0 151 44.4
Gohir.D05G030900 Gossypium hirsutum HOM05D003151 ORTHO05D003723 2.2e-15 86.7 120 45.0
Gorai.009G031100 Gossypium raimondii HOM05D003151 ORTHO05D003723 2.2e-15 86.7 120 45.0
Oeu034043.1 Olea europaea HOM05D003151 ORTHO05D003723 2.2e-15 86.7 123 43.9
Solyc07g021750.1 Solanum lycopersicum HOM05D003151 ORTHO05D003723 2.2e-15 86.7 157 41.4
MSTRG.6051 Avicennia marina HOM05D003151 ORTHO05D003723 2.9e-15 86.3 157 40.8
CDE05G0195 Ceratophyllum demersum HOM05D003151 ORTHO05D003723 2.9e-15 86.3 151 41.7
Sed0000540 Sechium edule HOM05D003151 ORTHO05D003723 2.9e-15 86.3 121 45.5
MSTRG.19521 Avicennia marina HOM05D003151 ORTHO05D003723 3.8e-15 85.9 123 43.1
CDE05G2742 Ceratophyllum demersum HOM05D003151 ORTHO05D003723 3.8e-15 85.9 151 42.4
Cc06_g11280 Coffea canephora HOM05D003151 ORTHO05D003723 3.8e-15 85.9 183 38.8
Gohir.A05G029400 Gossypium hirsutum HOM05D003151 ORTHO05D003723 3.8e-15 85.9 120 45.0
Nn8g39131 Nelumbo nucifera HOM05D003151 ORTHO05D003723 3.8e-15 85.9 124 42.7
unitig_27.g24726 Utricularia gibba HOM05D003151 ORTHO05D003723 3.8e-15 85.9 119 46.2
Ah.14g085250 Amaranthus hybridus HOM05D003151 ORTHO05D003723 5.0e-15 85.5 119 42.9
Sc08g0008410 Simmondsia chinensis HOM05D003151 ORTHO05D003723 5.0e-15 85.5 120 44.2
CiPaw.03G217400 Carya illinoinensis HOM05D003151 ORTHO05D003723 6.5e-15 85.1 163 39.3
TPR.G35502 Trifolium pratense HOM05D003151 ORTHO05D003723 6.5e-15 85.1 119 45.4
AL3G48670 Arabidopsis lyrata HOM05D003151 ORTHO05D003723 8.5e-15 84.7 119 41.2
AT2G19570 Arabidopsis thaliana HOM05D003151 ORTHO05D003723 8.5e-15 84.7 119 43.7
Gohir.A08G245300 Gossypium hirsutum HOM05D003151 ORTHO05D003723 8.5e-15 84.7 120 43.3
MD15G1205500 Malus domestica HOM05D003151 ORTHO05D003723 8.5e-15 84.7 120 42.5
QL02p062866 Quercus lobata HOM05D003151 ORTHO05D003723 8.5e-15 84.7 120 41.7
VMungo0464G1479 Vigna mungo HOM05D003151 ORTHO05D003723 8.5e-15 84.7 151 39.1
Aa31LG8G16580 Aethionema arabicum HOM05D003151 ORTHO05D003723 1.1e-14 84.3 118 45.8
BcaNung00481 Brassica carinata HOM05D003151 ORTHO05D003723 1.1e-14 84.3 118 44.9
A03p59000 Brassica napus HOM05D003151 ORTHO05D003723 1.1e-14 84.3 118 44.1
Lsat_1_v5_gn_5_145481 Lactuca sativa HOM05D003151 ORTHO05D003723 1.1e-14 84.3 118 41.5
MD02G1076800 Malus domestica HOM05D003151 ORTHO05D003723 1.1e-14 84.3 152 40.1
Potri.006G150600 Populus trichocarpa HOM05D003151 ORTHO05D003723 1.1e-14 84.3 118 41.5
Sabra06G0119300 Salix brachista HOM05D003151 ORTHO05D003723 1.1e-14 84.3 118 43.2
BraA03t14959Z Brassica rapa HOM05D003151 ORTHO05D003723 1.5e-14 84.0 118 44.1
Oeu006976.1 Olea europaea HOM05D003151 ORTHO05D003723 1.5e-14 84.0 133 41.4
SGA_v2.0_scaffold62G21599 Striga asiatica HOM05D003151 ORTHO05D003723 1.9e-14 83.6 153 39.2
SalBow6G4675 Salvia bowleyana HOM05D003151 ORTHO05D003723 3.2e-14 82.8 131 41.2
Prupe.7G211600 Prunus persica HOM05D003151 ORTHO05D003723 4.2e-14 82.4 120 42.5
PSO832G3392 Papaver somniferum HOM05D003151 ORTHO05D003723 5.5e-14 82.0 122 45.1
C07p57040 Brassica napus HOM05D003151 ORTHO05D003723 7.2e-14 81.6 118 43.2
Potri.018G066400 Populus trichocarpa HOM05D003151 ORTHO05D003723 7.2e-14 81.6 118 42.4
GSVIVG01015216001 Vitis vinifera HOM05D003151 ORTHO05D003723 9.4e-14 81.3 119 42.9
BcaC06g36600 Brassica carinata HOM05D003151 ORTHO05D003723 1.2e-13 80.9 118 44.9
C07p02310 Brassica napus HOM05D003151 ORTHO05D003723 1.2e-13 80.9 118 44.9
BolC7t40640H Brassica oleracea HOM05D003151 ORTHO05D003723 1.2e-13 80.9 118 44.9
BolC7t46173H Brassica oleracea HOM05D003151 ORTHO05D003723 1.2e-13 80.9 118 43.2
EL10Ac8g19236 Beta vulgaris HOM05D003151 ORTHO05D003723 1.6e-13 80.5 120 38.3
Migut.J00599 Erythranthe guttata HOM05D003151 ORTHO05D003723 1.6e-13 80.5 155 38.1
Thhalv10002058m.g Eutrema salsugineum HOM05D003151 ORTHO05D003723 1.6e-13 80.5 118 40.7
HanXRQChr10g0319261 Helianthus annuus HOM05D003151 ORTHO05D003723 1.6e-13 80.5 152 38.8
TWI34G0516 Tripterygium wilfordii HOM05D003151 ORTHO05D003723 2.1e-13 80.1 150 41.3
CARHR110010 Cardamine hirsuta HOM05D003151 ORTHO05D003723 2.7e-13 79.7 118 42.4
Ciclev10008864m.g Citrus clementina HOM05D003151 ORTHO05D003723 2.7e-13 79.7 122 41.0
TWI32G1006 Tripterygium wilfordii HOM05D003151 ORTHO05D003723 2.7e-13 79.7 118 44.1
BcaB03g16745 Brassica carinata HOM05D003151 ORTHO05D003723 3.6e-13 79.3 118 42.4
CARHR237490 Cardamine hirsuta HOM05D003151 ORTHO05D003723 3.6e-13 79.3 118 41.5
Sabra18G0058900 Salix brachista HOM05D003151 ORTHO05D003723 3.6e-13 79.3 118 39.8
SabraUnG0005300 Salix brachista HOM05D003151 ORTHO05D003723 3.6e-13 79.3 118 39.8
Sed0008525 Sechium edule HOM05D003151 ORTHO05D003723 3.6e-13 79.3 151 39.7
Aa31LG2G20920 Aethionema arabicum HOM05D003151 ORTHO05D003723 4.7e-13 79.0 118 42.4
Medtr6g092660 Medicago truncatula HOM05D003151 ORTHO05D003723 8.0e-13 78.2 154 40.3
PSO063G1447 Papaver somniferum HOM05D003151 ORTHO05D003723 8.0e-13 78.2 121 44.6
DCAR_024687 Daucus carota HOM05D003151 ORTHO05D003723 1.4e-12 77.4 118 42.4
A07p01170 Brassica napus HOM05D003151 ORTHO05D003723 2.3e-12 76.6 118 42.4
SMO367G0845 Selaginella moellendorffii HOM05D003151 ORTHO05D003723 3.0e-12 76.3 121 41.3
RcHm_v2.0_Chr2g0093131 Rosa chinensis HOM05D003151 ORTHO05D003723 4.0e-12 75.9 120 42.5
Sp3g32950 Schrenkiella parvula HOM05D003151 ORTHO05D003723 4.0e-12 75.9 118 39.0
FAN26G1922 Fragaria x ananassa HOM05D003151 ORTHO05D003723 1.5e-11 73.9 120 40.8
FAN26G3264 Fragaria x ananassa HOM05D003151 ORTHO05D003723 1.5e-11 73.9 120 40.8
AL7G22780 Arabidopsis lyrata HOM05D003151 ORTHO05D003723 2.0e-11 73.6 125 42.4
FvH4_1g07230 Fragaria vesca HOM05D003151 ORTHO05D003723 2.0e-11 73.6 120 40.8
Lj7P674T24 Lonicera japonica HOM05D003151 ORTHO05D003723 2.0e-11 73.6 121 43.8
AT4G29600 Arabidopsis thaliana HOM05D003151 ORTHO05D003723 4.4e-11 72.4 125 41.6
Thhalv10023108m.g Eutrema salsugineum HOM05D003151 ORTHO05D003723 4.4e-11 72.4 82 53.7
BcaC06g36599 Brassica carinata HOM05D003151 ORTHO05D003723 7.5e-11 71.6 83 54.2
FAN28G1682 Fragaria x ananassa HOM05D003151 ORTHO05D003723 7.5e-11 71.6 120 40.0
FAN19G2283 Fragaria x ananassa HOM05D003151 ORTHO05D003723 1.3e-10 70.9 120 40.0
arahy.Tifrunner.gnm1.ann1.ME19SE Arachis hypogaea HOM05D003151 ORTHO05D003723 1.7e-10 70.5 57 71.9
ECA240G2674 Erigeron canadensis HOM05D003151 ORTHO05D003723 1.7e-10 70.5 118 37.3
Pp3c11_5250 Physcomitrium patens HOM05D003151 ORTHO05D003723 1.7e-10 70.5 140 37.9
Pp3c7_23670 Physcomitrium patens HOM05D003151 ORTHO05D003723 1.7e-10 70.5 136 38.2
Sp7g27420 Schrenkiella parvula HOM05D003151 ORTHO05D003723 2.2e-10 70.1 64 57.8
Nn4g25536 Nelumbo nucifera HOM05D003151 ORTHO05D003723 4.9e-10 68.9 83 49.4
HanXRQChr03g0060791 Helianthus annuus HOM05D003151 ORTHO05D003723 8.3e-10 68.2 195 30.3
SEGI_35809 Sequoiadendron giganteum HOM05D003151 ORTHO05D003723 8.3e-10 68.2 128 39.1
Mapoly0047s0014 Marchantia polymorpha HOM05D003151 ORTHO05D003723 1.1e-09 67.8 159 34.0
AT4G29620 Arabidopsis thaliana HOM05D003151 ORTHO05D003723 1.8e-09 67.0 119 44.5
AT4G29610 Arabidopsis thaliana HOM05D003151 ORTHO05D003723 7.0e-09 65.1 118 39.8
BolC7t46172H Brassica oleracea HOM05D003151 ORTHO05D003723 7.0e-09 65.1 92 45.7
AL7G22770 Arabidopsis lyrata HOM05D003151 ORTHO05D003723 9.2e-09 64.7 142 40.8
Zm00001eb361370 Zea mays HOM05D003151 ORTHO05D003723 1.2e-08 64.3 118 35.6
Carub.0007s1096 Capsella rubella HOM05D003151 ORTHO05D003723 3.5e-08 62.8 112 39.3
Carub.0007s1094 Capsella rubella HOM05D003151 ORTHO05D003723 4.5e-08 62.4 118 40.7
MCO11G152 Micromonas commoda HOM05D003151 ORTHO05D003723 5.9e-08 62.0 119 35.3
Nn3g21857 Nelumbo nucifera HOM05D003151 ORTHO05D003723 5.9e-08 62.0 58 60.3
Pp3c1_4510 Physcomitrium patens HOM05D003151 ORTHO05D003723 1.0e-07 61.2 147 32.7
Os01g0712700 Oryza sativa ssp. japonica HOM05D003151 ORTHO05D003723 1.7e-07 60.5 159 34.6
BraA03t14958Z Brassica rapa HOM05D003151 ORTHO05D003723 2.9e-07 59.7 92 44.6
Thhalv10026995m.g Eutrema salsugineum HOM05D003151 ORTHO05D003723 2.9e-07 59.7 56 58.9
C07p56970 Brassica napus HOM05D003151 ORTHO05D003723 3.8e-07 59.3 92 44.6
AL7G22720 Arabidopsis lyrata HOM05D003151 ORTHO05D003723 5.0e-07 58.9 118 39.0
AL7G22750 Arabidopsis lyrata HOM05D003151 ORTHO05D003723 5.0e-07 58.9 56 58.9
A03p58990 Brassica napus HOM05D003151 ORTHO05D003723 5.0e-07 58.9 92 43.5
Gohir.D08G266301 Gossypium hirsutum HOM05D003151 ORTHO05D003723 5.0e-07 58.9 45 64.4
AL7G22810 Arabidopsis lyrata HOM05D003151 ORTHO05D003723 1.1e-06 57.8 52 61.5
AagrBONN_evm.TU.Sc2ySwM_368.3134 Anthoceros agrestis HOM05D003151 ORTHO05D003723 1.5e-06 57.4 188 29.3
AT4G29650 Arabidopsis thaliana HOM05D003151 ORTHO05D003723 1.9e-06 57.0 111 40.5
Zm00001eb155060 Zea mays HOM05D003151 ORTHO05D003723 1.9e-06 57.0 59 47.5
CBR_g7991 Chara braunii HOM05D003151 ORTHO05D003723 3.3e-06 56.2 135 29.6
AL7G22740 Arabidopsis lyrata HOM05D003151 ORTHO05D003723 5.6e-06 55.5 111 39.6
CARHR237400 Cardamine hirsuta HOM05D003151 ORTHO05D003723 7.3e-06 55.1 101 40.6


User provided reference genes

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