Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.ME62WN Arachis hypogaea HOM05D002037 ORTHO05D005261 1.4e-57 226.1 117 100.0
arahy.Tifrunner.gnm1.ann1.8Q3S3N Arachis hypogaea HOM05D002037 ORTHO05D005261 1.5e-30 136.3 84 85.7
arahy.Tifrunner.gnm1.ann1.WQ4U6A Arachis hypogaea HOM05D002037 ORTHO05D005261 1.5e-30 136.3 84 85.7
Lj1g0010809 Lotus japonicus HOM05D002037 ORTHO05D005261 5.6e-30 134.4 115 63.5
Sed0015816 Sechium edule HOM05D002037 ORTHO05D005261 2.3e-23 112.5 98 54.1
CiPaw.08G017100 Carya illinoinensis HOM05D002037 ORTHO05D005261 1.1e-22 110.2 94 59.6
ClCG05G017350 Citrullus lanatus HOM05D002037 ORTHO05D005261 4.3e-22 108.2 98 55.1
Haze_21662 Corylus avellana HOM05D002037 ORTHO05D005261 4.3e-22 108.2 102 54.9
Cfa013233 Carpinus fangiana HOM05D002037 ORTHO05D005261 9.5e-22 107.1 100 55.0
Ciclev10007230m.g Citrus clementina HOM05D002037 ORTHO05D005261 9.5e-22 107.1 105 53.3
CSS0033264 Camellia sinensis var. sinensis HOM05D002037 ORTHO05D005261 1.6e-21 106.3 96 57.3
Lj1g0006019 Lotus japonicus HOM05D002037 ORTHO05D005261 1.6e-21 106.3 92 62.0
Sed0009824 Sechium edule HOM05D002037 ORTHO05D005261 2.1e-21 105.9 98 55.1
Atru.chr7.2709 Acer truncatum HOM05D002037 ORTHO05D005261 2.8e-21 105.5 96 58.3
Psat5g026040 Pisum sativum HOM05D002037 ORTHO05D005261 3.6e-21 105.1 104 54.8
HanXRQChr03g0082961 Helianthus annuus HOM05D002037 ORTHO05D005261 8.0e-21 104.0 99 54.5
Lj7A751T36 Lonicera japonica HOM05D002037 ORTHO05D005261 8.0e-21 104.0 96 55.2
CiPaw.07G216200 Carya illinoinensis HOM05D002037 ORTHO05D005261 1.8e-20 102.8 94 56.4
CsaV3_3G046860 Cucumis sativus L. HOM05D002037 ORTHO05D005261 2.3e-20 102.4 98 53.1
Glyma.06G075000 Glycine max HOM05D002037 ORTHO05D005261 2.3e-20 102.4 90 62.2
Lalb_Chr08g0243691 Lupinus albus HOM05D002037 ORTHO05D005261 2.3e-20 102.4 82 65.9
MELO3C003650.2 Cucumis melo HOM05D002037 ORTHO05D005261 3.1e-20 102.1 97 53.6
Lalb_Chr11g0064041 Lupinus albus HOM05D002037 ORTHO05D005261 3.1e-20 102.1 83 66.3
Prupe.1G463700 Prunus persica HOM05D002037 ORTHO05D005261 3.1e-20 102.1 97 52.6
TWI63G1280 Tripterygium wilfordii HOM05D002037 ORTHO05D005261 3.1e-20 102.1 93 55.9
TWI32G0793 Tripterygium wilfordii HOM05D002037 ORTHO05D005261 5.2e-20 101.3 93 54.8
COL.COLO4_18641 Corchorus olitorius HOM05D002037 ORTHO05D005261 1.2e-19 100.1 103 53.4
Phvul.009G099700 Phaseolus vulgaris HOM05D002037 ORTHO05D005261 1.2e-19 100.1 90 63.3
Nn1g08375 Nelumbo nucifera HOM05D002037 ORTHO05D005261 1.5e-19 99.8 94 55.3
Lsat_1_v5_gn_5_59360 Lactuca sativa HOM05D002037 ORTHO05D005261 2.0e-19 99.4 99 52.5
Medtr3g108470 Medicago truncatula HOM05D002037 ORTHO05D005261 2.0e-19 99.4 83 63.9
Dinv09451 Davidia involucrata HOM05D002037 ORTHO05D005261 3.4e-19 98.6 99 47.5
Migut.A00462 Erythranthe guttata HOM05D002037 ORTHO05D005261 4.4e-19 98.2 99 52.5
VMungo1309G2917 Vigna mungo HOM05D002037 ORTHO05D005261 5.8e-19 97.8 90 60.0
TAR628G0359 Trochodendron aralioides HOM05D002037 ORTHO05D005261 7.5e-19 97.4 96 51.0
MD08G1132100 Malus domestica HOM05D002037 ORTHO05D005261 9.8e-19 97.1 97 51.5
Sc09g0007440 Simmondsia chinensis HOM05D002037 ORTHO05D005261 9.8e-19 97.1 99 49.5
TPR.G12447 Trifolium pratense HOM05D002037 ORTHO05D005261 9.8e-19 97.1 83 62.7
Sabra06G0217200 Salix brachista HOM05D002037 ORTHO05D005261 1.3e-18 96.7 94 54.3
Ca_15684_v3 Cicer arietinum L. HOM05D002037 ORTHO05D005261 1.7e-18 96.3 83 63.9
Potri.006G280200 Populus trichocarpa HOM05D002037 ORTHO05D005261 1.7e-18 96.3 94 55.3
Hund19377 Selenicereus undatus HOM05D002037 ORTHO05D005261 1.7e-18 96.3 95 51.6
AUR62020667 Chenopodium quinoa HOM05D002037 ORTHO05D005261 2.2e-18 95.9 98 53.1
Glyma.04G073900 Glycine max HOM05D002037 ORTHO05D005261 2.9e-18 95.5 91 59.3
AUR62028065 Chenopodium quinoa HOM05D002037 ORTHO05D005261 3.7e-18 95.1 98 52.0
Dinv37481 Davidia involucrata HOM05D002037 ORTHO05D005261 4.9e-18 94.7 91 52.7
MD15G1113300 Malus domestica HOM05D002037 ORTHO05D005261 4.9e-18 94.7 90 51.1
Thecc.09G001100 Theobroma cacao HOM05D002037 ORTHO05D005261 8.3e-18 94.0 96 53.1
FAN24G1054 Fragaria x ananassa HOM05D002037 ORTHO05D005261 7.0e-17 90.9 85 56.5
Lj5g0025434 Lotus japonicus HOM05D002037 ORTHO05D005261 7.0e-17 90.9 91 56.0
Manes.16G138600 Manihot esculenta HOM05D002037 ORTHO05D005261 7.0e-17 90.9 91 53.8
CAN.G195.8 Capsicum annuum HOM05D002037 ORTHO05D005261 9.2e-17 90.5 90 52.2
Solyc08g074370.4 Solanum lycopersicum HOM05D002037 ORTHO05D005261 9.2e-17 90.5 88 52.3
Sopen08g023030 Solanum pennellii HOM05D002037 ORTHO05D005261 9.2e-17 90.5 88 52.3
GSVIVG01035587001 Vitis vinifera HOM05D002037 ORTHO05D005261 9.2e-17 90.5 94 50.0
BcaB03g12684 Brassica carinata HOM05D002037 ORTHO05D005261 1.2e-16 90.1 97 50.5
Actinidia03327 Actinidia chinensis HOM05D002037 ORTHO05D005261 2.1e-16 89.4 102 48.0
Duzib187G1591 Durio zibethinus HOM05D002037 ORTHO05D005261 2.1e-16 89.4 90 54.4
SalBow4G1905 Salvia bowleyana HOM05D002037 ORTHO05D005261 2.1e-16 89.4 94 50.0
EL10Ac2g03672 Beta vulgaris HOM05D002037 ORTHO05D005261 2.7e-16 89.0 95 51.6
Duzib168G1462 Durio zibethinus HOM05D002037 ORTHO05D005261 3.5e-16 88.6 87 54.0
FAN27G2203 Fragaria x ananassa HOM05D002037 ORTHO05D005261 3.5e-16 88.6 85 55.3
RcHm_v2.0_Chr6g0312521 Rosa chinensis HOM05D002037 ORTHO05D005261 6.0e-16 87.8 85 56.5
CANSAT25G0165 Cannabis sativa HOM05D002037 ORTHO05D005261 7.8e-16 87.4 86 53.5
FvH4_2g30560 Fragaria vesca HOM05D002037 ORTHO05D005261 2.3e-15 85.9 85 54.1
Zm00001eb076460 Zea mays HOM05D002037 ORTHO05D005261 3.0e-15 85.5 95 53.7
ECA240G1370 Erigeron canadensis HOM05D002037 ORTHO05D005261 3.9e-15 85.1 90 51.1
Oeu057143.1 Olea europaea HOM05D002037 ORTHO05D005261 5.1e-15 84.7 100 46.0
SGA_v2.0_scaffold27G11691 Striga asiatica HOM05D002037 ORTHO05D005261 5.1e-15 84.7 94 45.7
Aqoxy6G00128 Aquilegia oxysepala HOM05D002037 ORTHO05D005261 6.6e-15 84.3 99 46.5
DCAR_030972 Daucus carota HOM05D002037 ORTHO05D005261 6.6e-15 84.3 96 47.9
QL12p030895 Quercus lobata HOM05D002037 ORTHO05D005261 1.1e-14 83.6 94 48.9
PGR044G2421 Punica granatum HOM05D002037 ORTHO05D005261 1.5e-14 83.2 94 47.9
THA.LOC104803581 Tarenaya hassleriana HOM05D002037 ORTHO05D005261 1.5e-14 83.2 105 42.9
Zm00001eb434410 Zea mays HOM05D002037 ORTHO05D005261 1.9e-14 82.8 100 52.0
Gohir.D08G274900 Gossypium hirsutum HOM05D002037 ORTHO05D005261 2.5e-14 82.4 89 49.4
Gorai.004G293400 Gossypium raimondii HOM05D002037 ORTHO05D005261 2.5e-14 82.4 89 49.4
MSTRG.25765 Avicennia marina HOM05D002037 ORTHO05D005261 3.3e-14 82.0 90 48.9
Gohir.A08G253200 Gossypium hirsutum HOM05D002037 ORTHO05D005261 3.3e-14 82.0 87 50.6
BcaC01g01107 Brassica carinata HOM05D002037 ORTHO05D005261 5.6e-14 81.3 91 49.5
DCAR_002179 Daucus carota HOM05D002037 ORTHO05D005261 5.6e-14 81.3 72 55.6
Cc00_g09840 Coffea canephora HOM05D002037 ORTHO05D005261 9.5e-14 80.5 89 49.4
Hma1.2p1_0214F.1_g090640 Hydrangea macrophylla HOM05D002037 ORTHO05D005261 9.5e-14 80.5 88 47.7
ATR0584G173 Amborella trichopoda HOM05D002037 ORTHO05D005261 1.6e-13 79.7 98 49.0
unitig_26.g8827 Utricularia gibba HOM05D002037 ORTHO05D005261 2.1e-13 79.3 75 53.3
SEGI_24212 Sequoiadendron giganteum HOM05D002037 ORTHO05D005261 2.8e-13 79.0 88 51.1
THA.LOC104803889 Tarenaya hassleriana HOM05D002037 ORTHO05D005261 2.8e-13 79.0 72 54.2
A08p18770 Brassica napus HOM05D002037 ORTHO05D005261 4.7e-13 78.2 110 43.6
BraA08t33838Z Brassica rapa HOM05D002037 ORTHO05D005261 4.7e-13 78.2 110 43.6
Actinidia25728 Actinidia chinensis HOM05D002037 ORTHO05D005261 6.2e-13 77.8 96 44.8
Eucgr.C03980 Eucalyptus grandis HOM05D002037 ORTHO05D005261 6.2e-13 77.8 92 47.8
PSO063G0181 Papaver somniferum HOM05D002037 ORTHO05D005261 6.2e-13 77.8 93 47.3
C03p88150 Brassica napus HOM05D002037 ORTHO05D005261 1.1e-12 77.0 108 43.5
MBI09_g40924_MAGBIO Magnolia biondii HOM05D002037 ORTHO05D005261 1.1e-12 77.0 94 45.7
vmacro05091 Vaccinium macrocarpon HOM05D002037 ORTHO05D005261 1.4e-12 76.6 106 38.7
Thhalv10024189m.g Eutrema salsugineum HOM05D002037 ORTHO05D005261 1.8e-12 76.3 106 41.5
A03p60560 Brassica napus HOM05D002037 ORTHO05D005261 3.1e-12 75.5 99 45.5
BraA03t15097Z Brassica rapa HOM05D002037 ORTHO05D005261 3.1e-12 75.5 99 45.5
C07p58470 Brassica napus HOM05D002037 ORTHO05D005261 4.0e-12 75.1 99 44.4
BolC7t46302H Brassica oleracea HOM05D002037 ORTHO05D005261 4.0e-12 75.1 99 44.4
CDE02G1944 Ceratophyllum demersum HOM05D002037 ORTHO05D005261 4.0e-12 75.1 99 46.5
PSO017G1653 Papaver somniferum HOM05D002037 ORTHO05D005261 4.0e-12 75.1 93 47.3
FAN20G0200 Fragaria x ananassa HOM05D002037 ORTHO05D005261 5.2e-12 74.7 83 49.4
BolC3t21123H Brassica oleracea HOM05D002037 ORTHO05D005261 8.9e-12 73.9 106 43.4
Peaxi162Scf00213g01313 Petunia axillaris HOM05D002037 ORTHO05D005261 1.2e-11 73.6 94 41.5
SGA_v2.0_scaffold193G40648 Striga asiatica HOM05D002037 ORTHO05D005261 2.6e-11 72.4 78 50.0
PGR044G2064 Punica granatum HOM05D002037 ORTHO05D005261 5.8e-11 71.2 87 46.0
HPP92_025041 Vanilla planifolia HOM05D002037 ORTHO05D005261 9.9e-11 70.5 91 49.5
CDE08G1677 Ceratophyllum demersum HOM05D002037 ORTHO05D005261 1.3e-10 70.1 99 45.5
Aa31LG2G19150 Aethionema arabicum HOM05D002037 ORTHO05D005261 1.7e-10 69.7 96 42.7
FAN20G1121 Fragaria x ananassa HOM05D002037 ORTHO05D005261 6.4e-10 67.8 85 49.4
Potri.006G280600 Populus trichocarpa HOM05D003201 ORTHO05D008914 1.1e-09 67.0 75 49.3
MBI09_g01931_MAGBIO Magnolia biondii HOM05D002037 ORTHO05D005261 1.4e-09 66.6 75 48.0
AagrBONN_evm.TU.Sc2ySwM_117.676 Anthoceros agrestis HOM05D002037 ORTHO05D005261 3.0e-07 58.9 93 44.1
AL7G20910 Arabidopsis lyrata HOM05D002037 ORTHO05D005261 5.1e-07 58.2 81 40.7
AT4G31160 Arabidopsis thaliana HOM05D002037 ORTHO05D005261 6.6e-07 57.8 82 37.8
BcaNung01541 Brassica carinata HOM05D002037 ORTHO05D005261 1.9e-06 56.2 70 44.3
Mapoly0062s0116 Marchantia polymorpha HOM05D002037 ORTHO05D005261 4.3e-06 55.1 69 50.7
Sp7g29040 Schrenkiella parvula HOM05D002037 ORTHO05D005261 5.6e-06 54.7 80 40.0


User provided reference genes

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