Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.L2Q8ZF Arachis hypogaea HOM05D003404 ORTHO05D004052 5.3e-66 254.2 130 100.0
arahy.Tifrunner.gnm1.ann1.UB9Q96 Arachis hypogaea HOM05D003404 ORTHO05D004052 5.0e-56 221.1 157 77.1
arahy.Tifrunner.gnm1.ann1.04V0U4 Arachis hypogaea HOM05D003404 ORTHO05D004052 1.1e-55 219.9 157 76.4
arahy.Tifrunner.gnm1.ann1.F0HWYS Arachis hypogaea HOM05D003404 ORTHO05D004052 5.2e-37 157.9 90 90.0
Lalb_Chr15g0090861 Lupinus albus HOM05D003404 ORTHO05D004052 5.2e-37 157.9 90 90.0
Lj5C285G4 Lonicera japonica HOM05D003404 ORTHO05D004052 1.2e-36 156.8 90 88.9
arahy.Tifrunner.gnm1.ann1.TT7XH0 Arachis hypogaea HOM05D003404 ORTHO05D004052 1.5e-36 156.4 90 88.9
Glyma.07G272400 Glycine max HOM05D003404 ORTHO05D004052 1.5e-36 156.4 90 88.9
Glyma.17G002000 Glycine max HOM05D003404 ORTHO05D004052 1.5e-36 156.4 90 87.8
Lj4g0008829 Lotus japonicus HOM05D003404 ORTHO05D004052 1.5e-36 156.4 90 88.9
arahy.Tifrunner.gnm1.ann1.XY3U73 Arachis hypogaea HOM05D003404 ORTHO05D004052 2.0e-36 156.0 100 84.0
CAN.G855.55 Capsicum annuum HOM05D003404 ORTHO05D004052 3.4e-36 155.2 90 87.8
Nitab4.5_0003247g0080 Nicotiana tabacum HOM05D003404 ORTHO05D004052 3.4e-36 155.2 90 87.8
ECA236G3319 Erigeron canadensis HOM05D003404 ORTHO05D004052 4.4e-36 154.8 90 87.8
HanXRQChr15g0469691 Helianthus annuus HOM05D003404 ORTHO05D004052 4.4e-36 154.8 90 87.8
Phvul.003G076300 Phaseolus vulgaris HOM05D003404 ORTHO05D004052 5.8e-36 154.5 90 87.8
Solyc01g103010.4 Solanum lycopersicum HOM05D003404 ORTHO05D004052 5.8e-36 154.5 90 87.8
Lsat_1_v5_gn_9_83361 Lactuca sativa HOM05D003404 ORTHO05D004052 7.5e-36 154.1 86 90.7
VMungo1215G2990 Vigna mungo HOM05D003404 ORTHO05D004052 7.5e-36 154.1 90 87.8
CSS0015679 Camellia sinensis var. sinensis HOM05D003404 ORTHO05D004052 9.8e-36 153.7 90 87.8
CiPaw.05G001400 Carya illinoinensis HOM05D003404 ORTHO05D004052 9.8e-36 153.7 90 87.8
MELO3C016463.2 Cucumis melo HOM05D003404 ORTHO05D004052 9.8e-36 153.7 90 87.8
CsaV3_3G006660 Cucumis sativus L. HOM05D003404 ORTHO05D004052 9.8e-36 153.7 90 87.8
QL02p103380 Quercus lobata HOM05D003404 ORTHO05D004052 9.8e-36 153.7 90 87.8
Sopen01g045420 Solanum pennellii HOM05D003404 ORTHO05D004052 9.8e-36 153.7 125 69.6
GSVIVG01023143001 Vitis vinifera HOM05D003404 ORTHO05D004052 9.8e-36 153.7 90 87.8
Lalb_Chr18g0061171 Lupinus albus HOM05D003404 ORTHO05D004052 1.3e-35 153.3 90 86.7
Nn5g27178 Nelumbo nucifera HOM05D003404 ORTHO05D004052 1.3e-35 153.3 89 88.8
Peaxi162Scf00011g01927 Petunia axillaris HOM05D003404 ORTHO05D004052 1.3e-35 153.3 116 74.1
ClCG10G007400 Citrullus lanatus HOM05D003404 ORTHO05D004052 1.7e-35 152.9 90 87.8
Sed0011322 Sechium edule HOM05D003404 ORTHO05D004052 1.7e-35 152.9 90 87.8
Cfa004441 Carpinus fangiana HOM05D003404 ORTHO05D004052 2.2e-35 152.5 90 86.7
Haze_09982 Corylus avellana HOM05D003404 ORTHO05D004052 2.2e-35 152.5 90 86.7
Dinv29680 Davidia involucrata HOM05D003404 ORTHO05D004052 2.2e-35 152.5 90 86.7
RcHm_v2.0_Chr1g0383371 Rosa chinensis HOM05D003404 ORTHO05D004052 2.2e-35 152.5 90 87.8
Medtr4g134620 Medicago truncatula HOM05D003404 ORTHO05D004052 2.9e-35 152.1 90 85.6
TPR.G6014 Trifolium pratense HOM05D003404 ORTHO05D004052 2.9e-35 152.1 90 85.6
Ca_13528_v3 Cicer arietinum L. HOM05D003404 ORTHO05D004052 3.7e-35 151.8 90 85.6
Duzib192G0569 Durio zibethinus HOM05D003404 ORTHO05D004052 3.7e-35 151.8 127 66.9
MBI06_g16624_MAGBIO Magnolia biondii HOM05D003404 ORTHO05D004052 3.7e-35 151.8 85 91.8
Psat4g002640 Pisum sativum HOM05D003404 ORTHO05D004052 3.7e-35 151.8 90 85.6
SGA_v2.0_scaffold254G45235 Striga asiatica HOM05D003404 ORTHO05D004052 3.7e-35 151.8 88 87.5
MSTRG.16466 Avicennia marina HOM05D003404 ORTHO05D004052 4.9e-35 151.4 125 67.2
FvH4_7g33400 Fragaria vesca HOM05D003404 ORTHO05D004052 4.9e-35 151.4 126 68.3
FAN01G2685 Fragaria x ananassa HOM05D003404 ORTHO05D004052 4.9e-35 151.4 126 68.3
Actinidia26195 Actinidia chinensis HOM05D003404 ORTHO05D004052 6.4e-35 151.0 125 68.0
AUR62043067 Chenopodium quinoa HOM05D003404 ORTHO05D004052 6.4e-35 151.0 86 89.5
FAN03G0122 Fragaria x ananassa HOM05D003404 ORTHO05D004052 6.4e-35 151.0 126 68.3
TAR376G0925 Trochodendron aralioides HOM05D003404 ORTHO05D004052 6.4e-35 151.0 89 87.6
CANSAT21G0984 Cannabis sativa HOM05D003404 ORTHO05D004052 8.3e-35 150.6 90 85.6
Dinv29635 Davidia involucrata HOM05D003404 ORTHO05D004052 8.3e-35 150.6 90 86.7
Migut.B00720 Erythranthe guttata HOM05D003404 ORTHO05D004052 8.3e-35 150.6 90 84.4
Manes.07G030800 Manihot esculenta HOM05D003404 ORTHO05D004052 8.3e-35 150.6 126 66.7
EL10Ac6g13982 Beta vulgaris HOM05D003404 ORTHO05D004052 1.1e-34 150.2 86 89.5
DCAR_001727 Daucus carota HOM05D003404 ORTHO05D004052 1.1e-34 150.2 85 89.4
HanXRQChr04g0110261 Helianthus annuus HOM05D003404 ORTHO05D004052 1.1e-34 150.2 88 87.5
AUR62042960 Chenopodium quinoa HOM05D003404 ORTHO05D004052 1.4e-34 149.8 86 88.4
Duzib235G1119 Durio zibethinus HOM05D003404 ORTHO05D004052 1.4e-34 149.8 126 65.9
Ah.03g136760 Amaranthus hybridus HOM05D003404 ORTHO05D004052 1.9e-34 149.4 86 88.4
Aqoxy5G01845 Aquilegia oxysepala HOM05D003404 ORTHO05D004052 1.9e-34 149.4 85 89.4
Ciclev10000063m.g Citrus clementina HOM05D003404 ORTHO05D004052 1.9e-34 149.4 126 65.9
Potri.003G000500 Populus trichocarpa HOM05D003404 ORTHO05D004052 1.9e-34 149.4 90 85.6
Prupe.2G322700 Prunus persica HOM05D003404 ORTHO05D004052 2.4e-34 149.1 126 67.5
Oeu028474.1 Olea europaea HOM05D003404 ORTHO05D004052 3.2e-34 148.7 86 87.2
Thecc.06G019500 Theobroma cacao HOM05D003404 ORTHO05D004052 3.2e-34 148.7 126 65.9
Atru.chr6.225 Acer truncatum HOM05D003404 ORTHO05D004052 4.1e-34 148.3 126 65.9
Sc12g0008780 Simmondsia chinensis HOM05D003404 ORTHO05D004052 4.1e-34 148.3 86 87.2
ATR1089G109 Amborella trichopoda HOM05D003404 ORTHO05D004052 5.4e-34 147.9 85 89.4
PSO210G7577 Papaver somniferum HOM05D003404 ORTHO05D004052 5.4e-34 147.9 89 86.5
unitig_27.g24934 Utricularia gibba HOM05D003404 ORTHO05D004052 5.4e-34 147.9 90 83.3
COL.COLO4_31122 Corchorus olitorius HOM05D003404 ORTHO05D004052 7.0e-34 147.5 86 87.2
TWI14G1077 Tripterygium wilfordii HOM05D003404 ORTHO05D004052 7.0e-34 147.5 86 87.2
TWI59G0557 Tripterygium wilfordii HOM05D003404 ORTHO05D004052 7.0e-34 147.5 86 87.2
MD01G1232300 Malus domestica HOM05D003404 ORTHO05D004052 9.2e-34 147.1 126 65.9
Rhsim05G0115300 Rhododendron simsii HOM05D003404 ORTHO05D004052 9.2e-34 147.1 125 66.4
Cc02_g23620 Coffea canephora HOM05D003404 ORTHO05D004052 1.6e-33 146.4 90 83.3
PSO761G0035 Papaver somniferum HOM05D003404 ORTHO05D004052 1.6e-33 146.4 89 86.5
THA.LOC104801780 Tarenaya hassleriana HOM05D003404 ORTHO05D004052 1.6e-33 146.4 90 82.2
Zm00001eb207390 Zea mays HOM05D003404 ORTHO05D004052 1.6e-33 146.4 86 87.2
Gohir.A06G144600 Gossypium hirsutum HOM05D003404 ORTHO05D004052 2.1e-33 146.0 123 65.9
Gohir.D06G150300 Gossypium hirsutum HOM05D003404 ORTHO05D004052 2.1e-33 146.0 123 65.9
Gorai.010G175500 Gossypium raimondii HOM05D003404 ORTHO05D004052 2.1e-33 146.0 123 65.9
THA.LOC104805135 Tarenaya hassleriana HOM05D003404 ORTHO05D004052 2.1e-33 146.0 126 64.3
vmacro19829 Vaccinium macrocarpon HOM05D003404 ORTHO05D004052 2.1e-33 146.0 125 65.6
MD07G1304100 Malus domestica HOM05D003404 ORTHO05D004052 2.7e-33 145.6 126 65.1
Os02g0167700 Oryza sativa ssp. japonica HOM05D003404 ORTHO05D004052 2.7e-33 145.6 85 88.2
Potri.004G229300 Populus trichocarpa HOM05D003404 ORTHO05D004052 3.5e-33 145.2 90 83.3
Sabra01G0174500 Salix brachista HOM05D003404 ORTHO05D004052 3.5e-33 145.2 90 83.3
CDE05G1207 Ceratophyllum demersum HOM05D003404 ORTHO05D004052 4.6e-33 144.8 89 84.3
Eucgr.G00074 Eucalyptus grandis HOM05D003404 ORTHO05D004052 6.0e-33 144.4 126 65.1
PGR042G3714 Punica granatum HOM05D003404 ORTHO05D004052 7.8e-33 144.1 126 64.3
Sabra03G0000100 Salix brachista HOM05D003404 ORTHO05D004052 1.0e-32 143.7 90 82.2
C07p33270 Brassica napus HOM05D003404 ORTHO05D004052 1.3e-32 143.3 126 65.1
BolC7t43839H Brassica oleracea HOM05D003404 ORTHO05D004052 1.3e-32 143.3 126 65.1
Sp2g13790 Schrenkiella parvula HOM05D003404 ORTHO05D004052 1.3e-32 143.3 126 65.1
arahy.Tifrunner.gnm1.ann1.GG9Z8N Arachis hypogaea HOM05D003404 ORTHO05D004052 1.7e-32 142.9 86 83.7
HPP92_001482 Vanilla planifolia HOM05D003404 ORTHO05D004052 1.7e-32 142.9 85 85.9
A06p43570 Brassica napus HOM05D003404 ORTHO05D004052 3.9e-32 141.7 126 64.3
BcaC06g31225 Brassica carinata HOM05D003404 ORTHO05D004052 5.1e-32 141.4 126 64.3
BraA06t27242Z Brassica rapa HOM05D003404 ORTHO05D004052 5.1e-32 141.4 126 64.3
Aa31LG2G7580 Aethionema arabicum HOM05D003404 ORTHO05D004052 8.6e-32 140.6 86 83.7
AT2G02560 Arabidopsis thaliana HOM05D003404 ORTHO05D004052 1.1e-31 140.2 126 64.3
Thhalv10003535m.g Eutrema salsugineum HOM05D003404 ORTHO05D004052 1.1e-31 140.2 126 64.3
Carub.0005s0156 Capsella rubella HOM05D003404 ORTHO05D004052 1.5e-31 139.8 126 64.3
CARHR145090 Cardamine hirsuta HOM05D003404 ORTHO05D004052 1.5e-31 139.8 126 64.3
BcaB07g30328 Brassica carinata HOM05D003404 ORTHO05D004052 2.5e-31 139.0 126 63.5
AL5G11830 Arabidopsis lyrata HOM05D003404 ORTHO05D004052 4.3e-31 138.3 126 63.5
BcaC03g17156 Brassica carinata HOM05D003404 ORTHO05D004052 4.3e-31 138.3 125 64.0
A02p33040 Brassica napus HOM05D003404 ORTHO05D004052 5.6e-31 137.9 126 63.5
C02p50810 Brassica napus HOM05D003404 ORTHO05D004052 5.6e-31 137.9 126 63.5
BolC2t11162H Brassica oleracea HOM05D003404 ORTHO05D004052 5.6e-31 137.9 126 63.5
BraA02t08325Z Brassica rapa HOM05D003404 ORTHO05D004052 5.6e-31 137.9 126 63.5
arahy.Tifrunner.gnm1.ann1.536Q9G Arachis hypogaea HOM05D003404 ORTHO05D004052 8.1e-30 134.0 97 74.2
SHI05020 Sapria himalayana HOM05D003404 ORTHO05D004052 1.8e-29 132.9 84 78.6
Lsat_1_v5_gn_2_40780 Lactuca sativa HOM05D003404 ORTHO05D004052 2.2e-27 125.9 85 77.6
Pp3c8_3260 Physcomitrium patens HOM05D003404 ORTHO05D004052 1.6e-25 119.8 85 72.9
Mapoly0029s0003 Marchantia polymorpha HOM05D003404 ORTHO05D004052 6.0e-25 117.9 81 75.3
SMO364G0878 Selaginella moellendorffii HOM05D003404 ORTHO05D004052 7.8e-25 117.5 85 72.9
AagrBONN_evm.TU.Sc2ySwM_228.3869 Anthoceros agrestis HOM05D003404 ORTHO05D004052 3.0e-24 115.5 81 72.8
Pp3c4_6460 Physcomitrium patens HOM05D003404 ORTHO05D004052 4.3e-23 111.7 85 70.6
arahy.Tifrunner.gnm1.ann1.I4H71T Arachis hypogaea HOM05D003404 ORTHO05D004052 9.6e-15 84.0 49 85.7
Haze_26135 Corylus avellana HOM05D003404 ORTHO05D004052 2.1e-14 82.8 81 49.4
PRCOL_00003487 Prasinoderma coloniale HOM05D003404 ORTHO05D004052 5.8e-12 74.7 84 47.6
Actinidia01636 Actinidia chinensis HOM05D003404 ORTHO05D004052 2.9e-11 72.4 41 87.8
BcaC06g31227 Brassica carinata HOM05D003404 ORTHO05D004052 1.4e-10 70.1 41 87.8
arahy.Tifrunner.gnm1.ann1.GKM8IL Arachis hypogaea HOM05D003404 ORTHO05D004052 1.9e-10 69.7 41 82.9
arahy.Tifrunner.gnm1.ann1.V95A4R Arachis hypogaea HOM05D003404 ORTHO05D004052 1.2e-09 67.0 77 51.9
MCO07G702 Micromonas commoda HOM05D003404 ORTHO05D004052 1.2e-09 67.0 85 47.1
Cre03.g177053 Chlamydomonas reinhardtii HOM05D003404 ORTHO05D004052 9.6e-07 57.4 88 43.2


User provided reference genes

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