Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.EMU6Q2 Arachis hypogaea HOM05D001734 ORTHO05D003483 8.3e-57 223.4 107 100.0
arahy.Tifrunner.gnm1.ann1.2D0TBT Arachis hypogaea HOM05D001734 ORTHO05D003483 1.5e-42 176.0 116 79.3
arahy.Tifrunner.gnm1.ann1.1I6Y5K Arachis hypogaea HOM05D001734 ORTHO05D003483 4.1e-40 167.9 104 80.8
Ca_16175_v3 Cicer arietinum L. HOM05D001734 ORTHO05D003483 1.4e-35 152.9 116 68.1
Lj1g0011912 Lotus japonicus HOM05D001734 ORTHO05D003483 1.8e-35 152.5 116 66.4
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 2.4e-35 152.1 116 69.8
Medtr3g077860 Medicago truncatula HOM05D001734 ORTHO05D003483 3.1e-35 151.8 116 68.1
Phvul.009G178400 Phaseolus vulgaris HOM05D001734 ORTHO05D003483 9.9e-34 146.7 116 65.5
Lalb_Chr08g0236521 Lupinus albus HOM05D001734 ORTHO05D003483 1.3e-33 146.4 96 70.8
TPR.G6095 Trifolium pratense HOM05D001734 ORTHO05D003483 1.6e-31 139.4 109 67.9
Sed0023277 Sechium edule HOM05D001734 ORTHO05D003483 6.0e-31 137.5 116 57.8
VMungo1309G1926 Vigna mungo HOM05D000002 ORTHO05D000001 6.0e-31 137.5 116 62.9
Cc04_g14140 Coffea canephora HOM05D001734 ORTHO05D003483 8.7e-30 133.7 116 59.5
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 1.1e-29 133.3 116 56.9
CsaV3_1G001470 Cucumis sativus L. HOM05D001734 ORTHO05D003483 1.5e-29 132.9 116 56.0
ClCG06G017040 Citrullus lanatus HOM05D001734 ORTHO05D003483 1.9e-29 132.5 116 55.2
Haze_07473 Corylus avellana HOM05D001734 ORTHO05D003483 1.9e-29 132.5 116 57.8
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 2.5e-29 132.1 116 60.3
CiPaw.11G026100 Carya illinoinensis HOM05D001734 ORTHO05D003483 3.3e-29 131.7 116 58.6
PSO063G7150 Papaver somniferum HOM05D001734 ORTHO05D003483 5.6e-29 131.0 116 57.8
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 7.3e-29 130.6 116 56.9
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 1.3e-28 129.8 116 55.2
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 2.1e-28 129.0 116 56.0
Sc04g0001800 Simmondsia chinensis HOM05D001734 ORTHO05D003483 2.1e-28 129.0 116 56.9
Gohir.A09G171650 Gossypium hirsutum HOM05D001734 ORTHO05D003483 3.6e-28 128.3 116 56.9
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 3.6e-28 128.3 116 56.9
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 3.6e-28 128.3 116 56.9
arahy.Tifrunner.gnm1.ann1.BK2P93 Arachis hypogaea HOM05D001734 ORTHO05D003483 4.8e-28 127.9 104 65.4
Oeu016387.4 Olea europaea HOM05D001734 ORTHO05D003483 4.8e-28 127.9 116 56.0
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 6.2e-28 127.5 116 57.8
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 6.2e-28 127.5 116 55.2
AL5G27530 Arabidopsis lyrata HOM05D001734 ORTHO05D003483 8.1e-28 127.1 116 52.6
CARHR156920 Cardamine hirsuta HOM05D001734 ORTHO05D003483 1.1e-27 126.7 116 51.7
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 1.1e-27 126.7 115 54.8
PSO732G0258 Papaver somniferum HOM05D001734 ORTHO05D003483 1.4e-27 126.3 116 55.2
Rhsim08G0172200 Rhododendron simsii HOM05D001734 ORTHO05D003483 1.4e-27 126.3 116 53.4
SalBow5G1563 Salvia bowleyana HOM05D001734 ORTHO05D003483 1.4e-27 126.3 116 56.0
vmacro19389 Vaccinium macrocarpon HOM05D001734 ORTHO05D003483 1.4e-27 126.3 116 52.6
Hund02745 Selenicereus undatus HOM05D001734 ORTHO05D003483 2.4e-27 125.6 116 56.9
Carub.0005s1431 Capsella rubella HOM05D001734 ORTHO05D003483 3.1e-27 125.2 116 52.6
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 3.1e-27 125.2 116 59.5
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 3.1e-27 125.2 116 56.0
TAR629G2960 Trochodendron aralioides HOM05D001734 ORTHO05D003483 3.1e-27 125.2 117 56.4
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 4.0e-27 124.8 116 54.3
CSS0012833 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D003483 5.3e-27 124.4 116 54.3
MSTRG.11455 Avicennia marina HOM05D001734 ORTHO05D003483 6.9e-27 124.0 116 53.4
AT3G48190 Arabidopsis thaliana HOM05D001734 ORTHO05D003483 9.0e-27 123.6 116 51.7
Cpa.g.sc1166.1 Carica papaya HOM05D001734 ORTHO05D003483 9.0e-27 123.6 116 53.4
Migut.I00009 Erythranthe guttata HOM05D001734 ORTHO05D003483 9.0e-27 123.6 116 53.4
CAN.G1305.20 Capsicum annuum HOM05D001734 ORTHO05D003483 1.2e-26 123.2 116 54.3
Sopen03g032020 Solanum pennellii HOM05D001734 ORTHO05D003483 1.2e-26 123.2 116 53.4
Actinidia19322 Actinidia chinensis HOM05D001734 ORTHO05D003483 1.5e-26 122.9 125 50.4
Atru.chr9.2479 Acer truncatum HOM05D001734 ORTHO05D003483 2.6e-26 122.1 118 52.5
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 2.6e-26 122.1 116 54.3
SGA_v2.0_scaffold90G27914 Striga asiatica HOM05D001734 ORTHO05D003483 3.4e-26 121.7 116 53.4
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 5.8e-26 120.9 116 54.3
Manes.06G105000 Manihot esculenta HOM05D001734 ORTHO05D003483 2.9e-25 118.6 116 53.4
Peaxi162Scf00009g00112 Petunia axillaris HOM05D001734 ORTHO05D003483 2.9e-25 118.6 108 55.6
Aa31LG4G16790 Aethionema arabicum HOM05D001734 ORTHO05D003483 4.9e-25 117.9 116 50.9
Thhalv10010050m.g Eutrema salsugineum HOM05D001734 ORTHO05D003483 4.9e-25 117.9 116 51.7
TWI14G0283 Tripterygium wilfordii HOM05D001734 ORTHO05D003483 6.4e-25 117.5 116 50.0
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 1.9e-24 115.9 112 53.6
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 2.4e-24 115.5 116 53.4
THA.LOC104818218 Tarenaya hassleriana HOM05D001734 ORTHO05D003483 1.2e-23 113.2 116 47.4
Lsat_1_v5_gn_1_27061 Lactuca sativa HOM05D001734 ORTHO05D003483 1.6e-23 112.8 116 50.0
A06p27460 Brassica napus HOM05D001734 ORTHO05D003483 2.1e-23 112.5 116 49.1
C03p66700 Brassica napus HOM05D001734 ORTHO05D003483 2.1e-23 112.5 116 49.1
BolC3t18938H Brassica oleracea HOM05D001734 ORTHO05D003483 2.1e-23 112.5 116 49.1
BraA06t25686Z Brassica rapa HOM05D001734 ORTHO05D003483 2.1e-23 112.5 116 49.1
Migut.C00312 Erythranthe guttata HOM05D001734 ORTHO05D003483 2.1e-23 112.5 116 50.0
Zm00001eb126710 Zea mays HOM05D001734 ORTHO05D003483 4.6e-23 111.3 115 47.8
ECA247G1446 Erigeron canadensis HOM05D001734 ORTHO05D003483 1.0e-22 110.2 116 50.0
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 1.8e-22 109.4 113 48.7
Aqoxy3G02937 Aquilegia oxysepala HOM05D001734 ORTHO05D003483 2.3e-22 109.0 121 45.5
HPP92_004845 Vanilla planifolia HOM05D002152 ORTHO05D003483 2.3e-22 109.0 116 50.0
Lj9A448T39 Lonicera japonica HOM05D001734 ORTHO05D003483 3.0e-22 108.6 127 48.8
Rhsim06G0125200 Rhododendron simsii HOM05D001734 ORTHO05D003483 1.1e-21 106.7 117 47.9
HanXRQChr02g0036361 Helianthus annuus HOM05D001734 ORTHO05D003483 1.9e-21 105.9 117 48.7
Os01g0106700 Oryza sativa ssp. japonica HOM05D001734 ORTHO05D003483 1.3e-20 103.2 115 47.0
SHI17017 Sapria himalayana HOM05D001734 ORTHO05D003483 2.8e-20 102.1 116 53.4
SEGI_17988 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 2.8e-20 102.1 118 46.6
CDE07G0247 Ceratophyllum demersum HOM05D001734 ORTHO05D003483 1.1e-19 100.1 114 43.0
Eucgr.K02842 Eucalyptus grandis HOM05D001734 ORTHO05D003483 5.3e-19 97.8 116 47.4
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 1.5e-18 96.3 114 43.9
FAN15G3378 Fragaria x ananassa HOM05D001734 ORTHO05D003483 2.0e-18 95.9 114 44.7
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 1.7e-17 92.8 114 43.9
FAN05G0227 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.7e-17 92.8 114 43.9
FAN24G1896 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.7e-17 92.8 114 43.9
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 1.9e-16 89.4 111 45.9
Rhsim02G0151200 Rhododendron simsii HOM05D001734 ORTHO05D003483 5.5e-16 87.8 106 43.4
ATR0730G017 Amborella trichopoda HOM05D001734 ORTHO05D003483 3.0e-14 82.0 115 40.0
CBR_g286 Chara braunii HOM05D000004 ORTHO05D000002 3.3e-13 78.6 95 42.1
AagrBONN_evm.TU.Sc2ySwM_117.1596 Anthoceros agrestis HOM05D001734 ORTHO05D003483 4.8e-12 74.7 117 36.8
Pp3c2_23700 Physcomitrium patens HOM05D001734 ORTHO05D003483 1.4e-11 73.2 116 35.3
Nitab4.5_0000984g0080 Nicotiana tabacum HOM05D001734 ORTHO05D003483 2.4e-11 72.4 51 64.7
Mapoly0081s0051 Marchantia polymorpha HOM05D001734 ORTHO05D003483 6.9e-11 70.9 94 40.4
BcaNung06699 Brassica carinata HOM05D001734 ORTHO05D003483 7.6e-10 67.4 47 59.6
COL.COLO4_30039 Corchorus olitorius HOM05D001734 ORTHO05D003483 1.2e-07 60.1 55 49.1
TPR.G21158 Trifolium pratense HOM05D001734 ORTHO05D003483 1.3e-06 56.6 35 71.4


User provided reference genes

Program Settings