Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.EHW2CP Arachis hypogaea HOM05D003738 ORTHO05D005143 4.8e-34 147.1 68 100.0
arahy.Tifrunner.gnm1.ann1.8AFI1C Arachis hypogaea HOM05D003738 ORTHO05D005143 1.6e-24 115.5 68 77.9
arahy.Tifrunner.gnm1.ann1.KYQ4XK Arachis hypogaea HOM05D003738 ORTHO05D005143 2.9e-23 111.3 65 80.0
Lj2g0012793 Lotus japonicus HOM05D003738 ORTHO05D005143 5.0e-23 110.5 65 78.5
arahy.Tifrunner.gnm1.ann1.85I739 Arachis hypogaea HOM05D003738 ORTHO05D005143 1.1e-22 109.4 66 74.2
arahy.Tifrunner.gnm1.ann1.UI9B1P Arachis hypogaea HOM05D003738 ORTHO05D005143 1.9e-22 108.6 65 78.5
Glyma.02G238800 Glycine max HOM05D003738 ORTHO05D005143 4.2e-22 107.5 65 76.9
Glyma.14G207700 Glycine max HOM05D003738 ORTHO05D005143 4.2e-22 107.5 65 76.9
arahy.Tifrunner.gnm1.ann1.J2B3IW Arachis hypogaea HOM05D003738 ORTHO05D005143 7.2e-22 106.7 66 77.3
Lalb_Chr02g0160571 Lupinus albus HOM05D003738 ORTHO05D005143 1.6e-21 105.5 65 75.4
Lalb_Chr06g0176761 Lupinus albus HOM05D003738 ORTHO05D005143 1.6e-21 105.5 65 73.8
RcHm_v2.0_Chr3g0494041 Rosa chinensis HOM05D003738 ORTHO05D005143 1.6e-21 105.5 65 73.8
Atru.chr1.1579 Acer truncatum HOM05D003738 ORTHO05D005143 2.1e-21 105.1 65 75.4
Ca_04135_v3 Cicer arietinum L. HOM05D003738 ORTHO05D005143 2.7e-21 104.8 65 72.3
MD00G1054500 Malus domestica HOM05D003738 ORTHO05D005143 3.6e-21 104.4 65 73.8
Prupe.3G150000 Prunus persica HOM05D003738 ORTHO05D005143 3.6e-21 104.4 65 73.8
TPR.G25203 Trifolium pratense HOM05D003738 ORTHO05D005143 3.6e-21 104.4 65 70.8
MD09G1258100 Malus domestica HOM05D003738 ORTHO05D005143 8.0e-21 103.2 65 70.8
Medtr6g004200 Medicago truncatula HOM05D003738 ORTHO05D005143 8.0e-21 103.2 65 70.8
CANSAT78G1141 Cannabis sativa HOM05D003738 ORTHO05D005143 1.0e-20 102.8 65 73.8
Cpa.g.sc170.16 Carica papaya HOM05D003738 ORTHO05D005143 1.0e-20 102.8 65 73.8
QL02p049823 Quercus lobata HOM05D003738 ORTHO05D005143 1.0e-20 102.8 65 73.8
CSS0050020 Camellia sinensis var. sinensis HOM05D003738 ORTHO05D005143 1.4e-20 102.4 65 73.8
Phvul.008G243200 Phaseolus vulgaris HOM05D003738 ORTHO05D005143 1.4e-20 102.4 65 73.8
VMungo0647G1516 Vigna mungo HOM05D003738 ORTHO05D005143 1.4e-20 102.4 65 73.8
Actinidia36345 Actinidia chinensis HOM05D003738 ORTHO05D005143 2.3e-20 101.7 65 73.8
Aqoxy3G00165 Aquilegia oxysepala HOM05D003738 ORTHO05D005143 2.3e-20 101.7 65 72.3
PSO017G1959 Papaver somniferum HOM05D003738 ORTHO05D005143 2.3e-20 101.7 65 73.8
PSO170G1643 Papaver somniferum HOM05D003738 ORTHO05D005143 2.3e-20 101.7 65 73.8
Psat1g052800 Pisum sativum HOM05D003738 ORTHO05D005143 2.3e-20 101.7 65 69.2
TAR374G1203 Trochodendron aralioides HOM05D003738 ORTHO05D005143 2.3e-20 101.7 65 73.8
A10p22030 Brassica napus HOM05D003738 ORTHO05D005143 4.0e-20 100.9 65 70.8
BraA10t44260Z Brassica rapa HOM05D003738 ORTHO05D005143 4.0e-20 100.9 65 70.8
Carub.0006s1559 Capsella rubella HOM05D003738 ORTHO05D005143 5.2e-20 100.5 65 69.2
Cfa007882 Carpinus fangiana HOM05D003738 ORTHO05D005143 5.2e-20 100.5 65 70.8
Lsat_1_v5_gn_2_80860 Lactuca sativa HOM05D003738 ORTHO05D005143 5.2e-20 100.5 65 72.3
GSVIVG01030948001 Vitis vinifera HOM05D003738 ORTHO05D005143 5.2e-20 100.5 65 72.3
Cc07_g08440 Coffea canephora HOM05D003738 ORTHO05D005143 6.8e-20 100.1 65 70.8
Gohir.A11G166650 Gossypium hirsutum HOM05D003738 ORTHO05D005143 6.8e-20 100.1 65 72.3
Gohir.D11G173000 Gossypium hirsutum HOM05D003738 ORTHO05D005143 6.8e-20 100.1 65 72.3
Gorai.007G185300 Gossypium raimondii HOM05D003738 ORTHO05D005143 6.8e-20 100.1 65 72.3
Nn4g24034 Nelumbo nucifera HOM05D003738 ORTHO05D005143 6.8e-20 100.1 65 70.8
PSO455G0115 Papaver somniferum HOM05D003738 ORTHO05D005143 6.8e-20 100.1 65 72.3
AT5G17380 Arabidopsis thaliana HOM05D003738 ORTHO05D005143 8.8e-20 99.8 65 69.2
BcaB08g36776 Brassica carinata HOM05D003738 ORTHO05D005143 8.8e-20 99.8 65 69.2
BcaC04g18797 Brassica carinata HOM05D003738 ORTHO05D005143 8.8e-20 99.8 65 69.2
C09p59780 Brassica napus HOM05D003738 ORTHO05D005143 8.8e-20 99.8 65 69.2
BolC9t58818H Brassica oleracea HOM05D003738 ORTHO05D005143 8.8e-20 99.8 65 69.2
COL.COLO4_12270 Corchorus olitorius HOM05D003738 ORTHO05D005143 8.8e-20 99.8 65 72.3
Thhalv10013104m.g Eutrema salsugineum HOM05D003738 ORTHO05D005143 8.8e-20 99.8 65 69.2
Lj2A438T57 Lonicera japonica HOM05D003738 ORTHO05D005143 8.8e-20 99.8 65 70.8
CARHR195830 Cardamine hirsuta HOM05D003738 ORTHO05D005143 1.2e-19 99.4 65 67.7
Duzib133G1513 Durio zibethinus HOM05D003738 ORTHO05D005143 1.2e-19 99.4 65 70.8
ECA238G0020 Erigeron canadensis HOM05D003738 ORTHO05D005143 1.2e-19 99.4 65 70.8
Potri.004G094600 Populus trichocarpa HOM05D003738 ORTHO05D005143 1.2e-19 99.4 65 72.3
Rhsim10G0076800 Rhododendron simsii HOM05D003738 ORTHO05D005143 1.2e-19 99.4 65 72.3
GSVIVG01013575001 Vitis vinifera HOM05D003738 ORTHO05D005143 1.2e-19 99.4 65 70.8
MSTRG.15310 Avicennia marina HOM05D003738 ORTHO05D005143 1.5e-19 99.0 65 69.2
HanXRQChr07g0193781 Helianthus annuus HOM05D003738 ORTHO05D005143 1.5e-19 99.0 65 70.8
Oeu061823.1 Olea europaea HOM05D003738 ORTHO05D005143 1.5e-19 99.0 65 69.2
TWI74G0253 Tripterygium wilfordii HOM05D003738 ORTHO05D005143 1.5e-19 99.0 65 70.8
Haze_14195 Corylus avellana HOM05D003738 ORTHO05D005143 2.0e-19 98.6 65 69.2
Dinv34815 Davidia involucrata HOM05D003738 ORTHO05D005143 2.0e-19 98.6 65 70.8
Sabra04G0063900 Salix brachista HOM05D003738 ORTHO05D005143 2.0e-19 98.6 65 72.3
Sp6g26840 Schrenkiella parvula HOM05D003738 ORTHO05D005143 2.0e-19 98.6 65 69.2
Solyc02g091100.3 Solanum lycopersicum HOM05D003738 ORTHO05D005143 2.0e-19 98.6 65 70.8
Sopen02g035750 Solanum pennellii HOM05D003738 ORTHO05D005143 2.0e-19 98.6 65 70.8
PGSC0003DMG400030633 Solanum tuberosum HOM05D003738 ORTHO05D005143 2.0e-19 98.6 65 70.8
TWI77G0590 Tripterygium wilfordii HOM05D003738 ORTHO05D005143 2.0e-19 98.6 65 70.8
vmacro05488 Vaccinium macrocarpon HOM05D003738 ORTHO05D005143 2.0e-19 98.6 65 72.3
AL6G28450 Arabidopsis lyrata HOM05D003738 ORTHO05D005143 2.6e-19 98.2 65 67.7
SalBow4G0814 Salvia bowleyana HOM05D003738 ORTHO05D005143 2.6e-19 98.2 65 67.7
Sc10g0001020 Simmondsia chinensis HOM05D003738 ORTHO05D005143 2.6e-19 98.2 65 69.2
AagrBONN_evm.TU.Sc2ySwM_369.580 Anthoceros agrestis HOM05D003738 ORTHO05D005143 3.4e-19 97.8 65 67.7
COL.COLO4_27155 Corchorus olitorius HOM05D003738 ORTHO05D005143 3.4e-19 97.8 65 70.8
MBI16_g21165_MAGBIO Magnolia biondii HOM05D003738 ORTHO05D005143 3.4e-19 97.8 65 69.2
Peaxi162Scf00129g00317 Petunia axillaris HOM05D003738 ORTHO05D005143 3.4e-19 97.8 65 69.2
SGA_v2.0_scaffold329G48870 Striga asiatica HOM05D003738 ORTHO05D005143 3.4e-19 97.8 65 69.2
CAN.G625.63 Capsicum annuum HOM05D003738 ORTHO05D005143 4.4e-19 97.4 65 69.2
Eucgr.F02797 Eucalyptus grandis HOM05D003738 ORTHO05D005143 4.4e-19 97.4 65 70.8
FAN23G1334 Fragaria x ananassa HOM05D003738 ORTHO05D005143 4.4e-19 97.4 65 67.7
FAN26G1505 Fragaria x ananassa HOM05D003738 ORTHO05D005143 4.4e-19 97.4 65 67.7
Nitab4.5_0007290g0010 Nicotiana tabacum HOM05D003738 ORTHO05D005143 4.4e-19 97.4 65 69.2
Nitab4.5_0011323g0010 Nicotiana tabacum HOM05D003738 ORTHO05D005143 4.4e-19 97.4 65 69.2
Peaxi162Scf00458g00011 Petunia axillaris HOM05D003738 ORTHO05D005143 4.4e-19 97.4 65 69.2
HPP92_003826 Vanilla planifolia HOM05D003738 ORTHO05D005143 4.4e-19 97.4 65 66.2
Ciclev10011371m.g Citrus clementina HOM05D003738 ORTHO05D005143 5.7e-19 97.1 65 70.8
ATR0057G018 Amborella trichopoda HOM05D003738 ORTHO05D005143 7.5e-19 96.7 65 66.2
arahy.Tifrunner.gnm1.ann1.3J26XN Arachis hypogaea HOM05D003738 ORTHO05D005143 7.5e-19 96.7 62 72.6
FvH4_1g28990 Fragaria vesca HOM05D003738 ORTHO05D005143 7.5e-19 96.7 65 67.7
FAN19G0768 Fragaria x ananassa HOM05D003738 ORTHO05D005143 7.5e-19 96.7 65 67.7
Migut.L00189 Erythranthe guttata HOM05D003738 ORTHO05D005143 9.7e-19 96.3 65 67.7
SEGI_09825 Sequoiadendron giganteum HOM05D003738 ORTHO05D005143 9.7e-19 96.3 65 64.6
arahy.Tifrunner.gnm1.ann1.S5LGPQ Arachis hypogaea HOM05D003738 ORTHO05D005143 1.3e-18 95.9 65 70.8
Duzib138G1092 Durio zibethinus HOM05D003738 ORTHO05D005143 1.3e-18 95.9 65 67.7
THA.LOC104820853 Tarenaya hassleriana HOM05D003738 ORTHO05D005143 1.3e-18 95.9 65 69.2
Aa31LG11G12270 Aethionema arabicum HOM05D003738 ORTHO05D005143 1.7e-18 95.5 65 67.7
Dinv14852 Davidia involucrata HOM05D003738 ORTHO05D005143 1.7e-18 95.5 62 71.0
Ciclev10013371m.g Citrus clementina HOM05D003738 ORTHO05D005143 2.2e-18 95.1 65 70.8
Nitab4.5_0002456g0020 Nicotiana tabacum HOM05D003738 ORTHO05D005143 3.7e-18 94.4 65 67.7
Mapoly0099s0049 Marchantia polymorpha HOM05D003738 ORTHO05D005143 4.8e-18 94.0 65 64.6
AUR62023216 Chenopodium quinoa HOM05D003738 ORTHO05D005143 6.3e-18 93.6 65 66.2
AUR62023263 Chenopodium quinoa HOM05D003738 ORTHO05D005143 6.3e-18 93.6 65 66.2
Manes.01G113700 Manihot esculenta HOM05D003738 ORTHO05D005143 6.3e-18 93.6 65 69.2
CiPaw.03G065800 Carya illinoinensis HOM05D003738 ORTHO05D005143 8.3e-18 93.2 65 67.7
Sed0022193 Sechium edule HOM05D003738 ORTHO05D005143 8.3e-18 93.2 65 66.2
Ah.16g101450 Amaranthus hybridus HOM05D003738 ORTHO05D005143 1.1e-17 92.8 65 66.2
EL10Ac2g04518 Beta vulgaris HOM05D003738 ORTHO05D005143 1.1e-17 92.8 65 66.2
ClCG07G016430 Citrullus lanatus HOM05D003738 ORTHO05D005143 1.1e-17 92.8 65 64.6
arahy.Tifrunner.gnm1.ann1.E0ZWVI Arachis hypogaea HOM05D003738 ORTHO05D005143 1.4e-17 92.4 63 68.3
Hund13699 Selenicereus undatus HOM05D003738 ORTHO05D005143 1.8e-17 92.0 65 66.2
Zm00001eb336870 Zea mays HOM05D003738 ORTHO05D005143 1.8e-17 92.0 65 64.6
CDE07G0683 Ceratophyllum demersum HOM05D003738 ORTHO05D005143 3.1e-17 91.3 65 61.5
CsaV3_4G010390 Cucumis sativus L. HOM05D003738 ORTHO05D005143 4.1e-17 90.9 65 64.6
SHI25638 Sapria himalayana HOM05D003738 ORTHO05D005143 4.1e-17 90.9 65 64.6
CDE06G1483 Ceratophyllum demersum HOM05D003738 ORTHO05D005143 7.0e-17 90.1 65 61.5
Pp3c3_25360 Physcomitrium patens HOM05D003738 ORTHO05D005143 7.0e-17 90.1 65 64.6
Rhsim10G0074000 Rhododendron simsii HOM05D003738 ORTHO05D005143 1.2e-16 89.4 65 66.2
MELO3C010381.2 Cucumis melo HOM05D003738 ORTHO05D005143 4.5e-16 87.4 65 63.1
TAR629G2166 Trochodendron aralioides HOM05D003738 ORTHO05D005143 5.9e-16 87.0 65 63.1
Rhsim10G0075800 Rhododendron simsii HOM05D003738 ORTHO05D005143 2.9e-15 84.7 65 63.1
Rhsim10G0075200 Rhododendron simsii HOM05D003738 ORTHO05D005143 1.5e-14 82.4 62 64.5
Rhsim05G0052500 Rhododendron simsii HOM05D003738 ORTHO05D005143 1.9e-14 82.0 59 64.4
Rhsim10G0074800 Rhododendron simsii HOM05D003738 ORTHO05D005143 1.9e-14 82.0 63 63.5
arahy.Tifrunner.gnm1.ann1.YP6RFP Arachis hypogaea HOM05D003738 ORTHO05D005143 2.5e-14 81.6 51 72.5
Duzib114G0391 Durio zibethinus HOM05D003738 ORTHO05D005143 5.5e-14 80.5 63 65.1
RhsimUnG0182900 Rhododendron simsii HOM05D003738 ORTHO05D005143 2.1e-13 78.6 63 60.3
arahy.Tifrunner.gnm1.ann1.86RIW1 Arachis hypogaea HOM05D003738 ORTHO05D005143 3.6e-13 77.8 46 73.9
arahy.Tifrunner.gnm1.ann1.N2UQDL Arachis hypogaea HOM05D003738 ORTHO05D005143 4.7e-13 77.4 44 77.3
SMO196G0015 Selaginella moellendorffii HOM05D003738 ORTHO05D005143 3.0e-12 74.7 65 53.8
arahy.Tifrunner.gnm1.ann1.XG2Q3Z Arachis hypogaea HOM05D003738 ORTHO05D005143 4.0e-12 74.3 46 71.7
HanXRQChr02g0040721 Helianthus annuus HOM05D003738 ORTHO05D005143 5.2e-12 73.9 54 63.0
RhsimUnG0202300 Rhododendron simsii HOM05D003738 ORTHO05D005143 1.2e-11 72.8 51 66.7
arahy.Tifrunner.gnm1.ann1.L98BBS Arachis hypogaea HOM05D003738 ORTHO05D005143 3.4e-11 71.2 46 69.6
arahy.Tifrunner.gnm1.ann1.31213D Arachis hypogaea HOM05D003738 ORTHO05D005143 6.3e-10 67.0 61 59.0
arahy.Tifrunner.gnm1.ann1.P0BYU6 Arachis hypogaea HOM05D003738 ORTHO05D005143 1.4e-09 65.9 41 68.3
arahy.Tifrunner.gnm1.ann1.TLT49F Arachis hypogaea HOM05D003738 ORTHO05D005143 1.4e-09 65.9 51 60.8
arahy.Tifrunner.gnm1.ann1.996DKV Arachis hypogaea HOM05D003738 ORTHO05D005143 5.4e-09 63.9 41 63.4
arahy.Tifrunner.gnm1.ann1.AT2XXE Arachis hypogaea HOM05D003738 ORTHO05D005143 5.4e-09 63.9 67 50.7
CBR_g39224 Chara braunii HOM05D003738 ORTHO05D005143 7.0e-09 63.5 61 50.8
arahy.Tifrunner.gnm1.ann1.ZEW0UV Arachis hypogaea HOM05D003738 ORTHO05D005143 2.3e-07 58.5 45 62.2
arahy.Tifrunner.gnm1.ann1.PVN2ZV Arachis hypogaea HOM05D003738 ORTHO05D021496 1.5e-06 55.8 35 65.7
arahy.Tifrunner.gnm1.ann1.1HHJ34 Arachis hypogaea HOM05D000007 ORTHO05D000017 7.2e-06 53.5 40 57.5
arahy.Tifrunner.gnm1.ann1.95JV46 Arachis hypogaea HOM05D003738 ORTHO05D005143 9.5e-06 53.1 30 73.3


User provided reference genes

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