Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.CUSE89 Arachis hypogaea HOM05D003359 ORTHO05D019577 5.3e-89 330.9 154 100.0
arahy.Tifrunner.gnm1.ann1.6M8RVH Arachis hypogaea HOM05D003359 ORTHO05D004472 1.4e-65 253.1 136 86.0
arahy.Tifrunner.gnm1.ann1.9A08C8 Arachis hypogaea HOM05D003359 ORTHO05D004472 1.8e-65 252.7 129 89.1
arahy.Tifrunner.gnm1.ann1.ISLL24 Arachis hypogaea HOM05D003359 ORTHO05D019577 4.4e-59 231.5 129 83.7
Ca_25137_v3 Cicer arietinum L. HOM05D003359 ORTHO05D004472 8.6e-55 217.2 129 76.0
Phvul.001G255500 Phaseolus vulgaris HOM05D003359 ORTHO05D004472 1.9e-54 216.1 136 72.8
Hund06039 Selenicereus undatus HOM05D003359 ORTHO05D004472 4.3e-54 214.9 128 75.0
Glyma.11G243600 Glycine max HOM05D003359 ORTHO05D004472 7.3e-54 214.2 129 73.6
Lj6g0024639 Lotus japonicus HOM05D003359 ORTHO05D004472 7.3e-54 214.2 129 74.4
Glyma.05G174200 Glycine max HOM05D003359 ORTHO05D004472 1.2e-53 213.4 136 72.1
VMungo1383G0093 Vigna mungo HOM05D003359 ORTHO05D004472 1.6e-53 213.0 136 70.6
Phvul.002G259200 Phaseolus vulgaris HOM05D003359 ORTHO05D004472 2.1e-53 212.6 136 71.3
Glyma.08G131400 Glycine max HOM05D003359 ORTHO05D004472 2.8e-53 212.2 136 72.1
Manes.13G022100 Manihot esculenta HOM05D003359 ORTHO05D004472 3.6e-53 211.8 136 69.9
Actinidia37443 Actinidia chinensis HOM05D003359 ORTHO05D004472 8.0e-53 210.7 129 76.0
Medtr8g089745 Medicago truncatula HOM05D003359 ORTHO05D004472 1.0e-52 210.3 136 69.1
AUR62005500 Chenopodium quinoa HOM05D003359 ORTHO05D004472 1.4e-52 209.9 129 73.6
Oeu057546.1 Olea europaea HOM05D003359 ORTHO05D004472 1.8e-52 209.5 129 72.1
TPR.G6223 Trifolium pratense HOM05D003359 ORTHO05D004472 1.8e-52 209.5 136 68.4
CiPaw.05G179800 Carya illinoinensis HOM05D003359 ORTHO05D004472 2.3e-52 209.1 129 73.6
Ciclev10030938m.g Citrus clementina HOM05D003359 ORTHO05D004472 5.2e-52 208.0 129 70.5
AUR62024240 Chenopodium quinoa HOM05D003359 ORTHO05D004472 8.9e-52 207.2 129 71.3
Gohir.D02G157400 Gossypium hirsutum HOM05D003359 ORTHO05D004472 8.9e-52 207.2 129 71.3
Gorai.005G176600 Gossypium raimondii HOM05D003359 ORTHO05D004472 8.9e-52 207.2 129 71.3
CANSAT01G0511 Cannabis sativa HOM05D003359 ORTHO05D004472 2.0e-51 206.1 129 71.3
Cfa009233 Carpinus fangiana HOM05D003359 ORTHO05D004472 2.0e-51 206.1 129 71.3
Gohir.A03G133100 Gossypium hirsutum HOM05D003359 ORTHO05D004472 2.6e-51 205.7 129 70.5
Atru.chr11.2161 Acer truncatum HOM05D003359 ORTHO05D004472 4.4e-51 204.9 129 70.5
Psat7g058680 Pisum sativum HOM05D003359 ORTHO05D004472 4.4e-51 204.9 136 66.9
Sc14g0008780 Simmondsia chinensis HOM05D003359 ORTHO05D004472 4.4e-51 204.9 129 71.3
Lalb_Chr23g0277621 Lupinus albus HOM05D003359 ORTHO05D004472 5.8e-51 204.5 129 70.5
COL.COLO4_23483 Corchorus olitorius HOM05D003359 ORTHO05D004472 7.5e-51 204.1 129 71.3
Duzib251G0748 Durio zibethinus HOM05D003359 ORTHO05D004472 7.5e-51 204.1 129 69.8
arahy.Tifrunner.gnm1.ann1.5678GR Arachis hypogaea HOM05D003359 ORTHO05D004472 9.8e-51 203.8 132 67.4
Haze_12269 Corylus avellana HOM05D003359 ORTHO05D006537 9.8e-51 203.8 129 71.3
Thecc.02G263100 Theobroma cacao HOM05D003359 ORTHO05D004472 1.7e-50 203.0 129 71.3
arahy.Tifrunner.gnm1.ann1.JIIR6A Arachis hypogaea HOM05D003359 ORTHO05D004472 2.2e-50 202.6 129 69.0
SGA_v2.0_scaffold100G29574 Striga asiatica HOM05D003359 ORTHO05D004472 2.2e-50 202.6 129 71.3
Potri.008G185300 Populus trichocarpa HOM05D003359 ORTHO05D004472 2.9e-50 202.2 135 65.9
Nn3g16675 Nelumbo nucifera HOM05D003359 ORTHO05D004472 3.7e-50 201.8 129 68.2
Ca_17782_v3 Cicer arietinum L. HOM05D003359 ORTHO05D004472 4.9e-50 201.4 136 66.9
QL03p057173 Quercus lobata HOM05D003359 ORTHO05D004472 4.9e-50 201.4 129 70.5
vmacro16179 Vaccinium macrocarpon HOM05D003359 ORTHO05D004472 4.9e-50 201.4 135 68.1
Lalb_Chr07g0185431 Lupinus albus HOM05D003359 ORTHO05D004472 6.4e-50 201.1 129 72.1
Psat5g091760 Pisum sativum HOM05D003359 ORTHO05D004472 6.4e-50 201.1 133 69.9
Potri.010G048400 Populus trichocarpa HOM05D003359 ORTHO05D004472 1.1e-49 200.3 129 69.0
TAR622G1186 Trochodendron aralioides HOM05D003359 ORTHO05D004472 1.1e-49 200.3 129 68.2
Cc11_g15950 Coffea canephora HOM05D003359 ORTHO05D004472 1.4e-49 199.9 129 68.2
Haze_07805 Corylus avellana HOM05D003359 ORTHO05D004472 1.9e-49 199.5 129 69.8
QL03p057181 Quercus lobata HOM05D003359 ORTHO05D004472 2.4e-49 199.1 129 69.0
Nn4g22564 Nelumbo nucifera HOM05D003359 ORTHO05D004472 3.2e-49 198.7 129 66.7
Eucgr.H02477 Eucalyptus grandis HOM05D003359 ORTHO05D004472 4.1e-49 198.4 136 66.9
Dinv14737 Davidia involucrata HOM05D003359 ORTHO05D004472 5.4e-49 198.0 129 69.8
Medtr8g089725 Medicago truncatula HOM05D003359 ORTHO05D004472 5.4e-49 198.0 136 66.2
Sed0021427 Sechium edule HOM05D003359 ORTHO05D004472 5.4e-49 198.0 129 67.4
RcHm_v2.0_Chr4g0433401 Rosa chinensis HOM05D003359 ORTHO05D004472 7.0e-49 197.6 129 67.4
MELO3C010698.2 Cucumis melo HOM05D003359 ORTHO05D004472 9.2e-49 197.2 129 67.4
Medtr3g086580 Medicago truncatula HOM05D003359 ORTHO05D004472 9.2e-49 197.2 133 68.4
Medtr8g089735 Medicago truncatula HOM05D003359 ORTHO05D004472 9.2e-49 197.2 136 66.2
PSO067G0007 Papaver somniferum HOM05D003359 ORTHO05D004472 9.2e-49 197.2 128 68.0
Solyc05g013720.3 Solanum lycopersicum HOM05D003359 ORTHO05D004472 9.2e-49 197.2 129 68.2
Sopen05g008640 Solanum pennellii HOM05D003359 ORTHO05D004472 9.2e-49 197.2 129 68.2
TPR.G30530 Trifolium pratense HOM05D003359 ORTHO05D004472 9.2e-49 197.2 133 68.4
THA.LOC104805279 Tarenaya hassleriana HOM05D003359 ORTHO05D004472 2.0e-48 196.1 129 67.4
Duzib268G0493 Durio zibethinus HOM05D003359 ORTHO05D004472 2.7e-48 195.7 138 65.9
Eucgr.H02478 Eucalyptus grandis HOM05D003359 ORTHO05D004472 2.7e-48 195.7 136 65.4
Sabra10G0020500 Salix brachista HOM05D003359 ORTHO05D006537 3.5e-48 195.3 129 69.0
SalBow2G3613 Salvia bowleyana HOM05D003359 ORTHO05D004472 3.5e-48 195.3 129 65.9
GSVIVG01000554001 Vitis vinifera HOM05D003359 ORTHO05D005275 3.5e-48 195.3 129 66.7
Cpa.g.sc33.46 Carica papaya HOM05D003359 ORTHO05D004472 4.6e-48 194.9 129 65.9
CsaV3_2G025010 Cucumis sativus L. HOM05D003359 ORTHO05D004472 4.6e-48 194.9 129 66.7
Medtr8g089740 Medicago truncatula HOM05D003359 ORTHO05D004472 4.6e-48 194.9 136 64.7
Carub.0005s0430 Capsella rubella HOM05D003359 ORTHO05D004472 6.0e-48 194.5 129 65.1
Prupe.1G247000 Prunus persica HOM05D003359 ORTHO05D004472 6.0e-48 194.5 129 66.7
BraA02t08464Z Brassica rapa HOM05D003359 ORTHO05D004472 7.8e-48 194.1 129 65.9
Eucgr.H02479 Eucalyptus grandis HOM05D003359 ORTHO05D004472 7.8e-48 194.1 136 65.4
QL03p057135 Quercus lobata HOM05D003359 ORTHO05D004472 7.8e-48 194.1 136 66.9
Aqoxy5G03712 Aquilegia oxysepala HOM05D003359 ORTHO05D004472 1.0e-47 193.7 129 65.1
MSTRG.7949 Avicennia marina HOM05D003359 ORTHO05D004472 1.0e-47 193.7 136 65.4
BcaB07g30230 Brassica carinata HOM05D003359 ORTHO05D004472 1.0e-47 193.7 129 65.1
FvH4_4g25930 Fragaria vesca HOM05D003359 ORTHO05D004472 1.3e-47 193.4 129 65.1
FAN07G2501 Fragaria x ananassa HOM05D003359 ORTHO05D004472 1.3e-47 193.4 129 65.1
FAN12G2341 Fragaria x ananassa HOM05D003359 ORTHO05D004472 1.3e-47 193.4 129 65.1
FAN12G3248 Fragaria x ananassa HOM05D003359 ORTHO05D004472 1.3e-47 193.4 129 65.1
BcaC03g17337 Brassica carinata HOM05D003359 ORTHO05D004472 1.7e-47 193.0 129 65.1
C02p52860 Brassica napus HOM05D003359 ORTHO05D004472 1.7e-47 193.0 129 65.1
BolC2t11365H Brassica oleracea HOM05D003359 ORTHO05D004472 1.7e-47 193.0 129 65.1
Nitab4.5_0002787g0030 Nicotiana tabacum HOM05D003359 ORTHO05D004472 2.3e-47 192.6 129 66.7
Lj4g0008357 Lotus japonicus HOM05D003359 ORTHO05D004472 3.0e-47 192.2 130 66.2
MD13G1098300 Malus domestica HOM05D003359 ORTHO05D004472 3.0e-47 192.2 129 64.3
Aa31LG2G6140 Aethionema arabicum HOM05D003359 ORTHO05D006537 3.9e-47 191.8 129 64.3
AL5G15150 Arabidopsis lyrata HOM05D003359 ORTHO05D004472 3.9e-47 191.8 129 64.3
AT3G26380 Arabidopsis thaliana HOM05D003359 ORTHO05D004472 3.9e-47 191.8 129 64.3
CAN.G272.4 Capsicum annuum HOM05D003359 ORTHO05D004472 3.9e-47 191.8 129 66.7
Migut.K00614 Erythranthe guttata HOM05D003359 ORTHO05D004472 3.9e-47 191.8 129 66.7
MD16G1099400 Malus domestica HOM05D003359 ORTHO05D004472 5.0e-47 191.4 129 64.3
PSO478G4543 Papaver somniferum HOM05D003359 ORTHO05D004472 6.6e-47 191.0 129 67.4
Eucgr.H02480 Eucalyptus grandis HOM05D003359 ORTHO05D004472 8.6e-47 190.7 136 64.7
Thhalv10003806m.g Eutrema salsugineum HOM05D003359 ORTHO05D004472 1.1e-46 190.3 129 63.6
A02p34540 Brassica napus HOM05D003359 ORTHO05D004472 1.5e-46 189.9 129 64.3
TWI18G0898 Tripterygium wilfordii HOM05D003359 ORTHO05D004472 1.5e-46 189.9 130 66.2
PSO017G1803 Papaver somniferum HOM05D003359 ORTHO05D004472 1.9e-46 189.5 129 67.4
Peaxi162Scf00128g00456 Petunia axillaris HOM05D003359 ORTHO05D004472 1.9e-46 189.5 129 65.9
MBI19_g09304_MAGBIO Magnolia biondii HOM05D003359 ORTHO05D004472 2.5e-46 189.1 129 65.1
Sp2g15530 Schrenkiella parvula HOM05D003359 ORTHO05D004472 2.5e-46 189.1 129 63.6
Lsat_1_v5_gn_8_152721 Lactuca sativa HOM05D003359 ORTHO05D004472 3.3e-46 188.7 128 67.2
ATR0824G097 Amborella trichopoda HOM05D003359 ORTHO05D004472 4.3e-46 188.3 129 65.1
Nitab4.5_0000229g0100 Nicotiana tabacum HOM05D003359 ORTHO05D004472 5.6e-46 188.0 129 65.1
CARHR147390 Cardamine hirsuta HOM05D003359 ORTHO05D004472 7.3e-46 187.6 129 62.8
Lj3A1060T75 Lonicera japonica HOM05D003359 ORTHO05D004472 7.3e-46 187.6 142 60.6
Potri.010G048300 Populus trichocarpa HOM05D003359 ORTHO05D004472 7.3e-46 187.6 129 64.3
SEGI_30194 Sequoiadendron giganteum HOM05D003359 ORTHO05D004472 7.3e-46 187.6 129 64.3
CSS0009419 Camellia sinensis var. sinensis HOM05D003359 ORTHO05D004472 9.5e-46 187.2 129 66.7
TWI36G1577 Tripterygium wilfordii HOM05D003359 ORTHO05D004472 1.2e-45 186.8 129 63.6
Medtr2g096530 Medicago truncatula HOM05D003359 ORTHO05D004472 2.8e-45 185.7 136 62.5
Lalb_Chr04g0250101 Lupinus albus HOM05D003359 ORTHO05D004472 3.6e-45 185.3 129 63.6
DCAR_029363 Daucus carota HOM05D003359 ORTHO05D004472 6.2e-45 184.5 129 62.0
Lj6C814T12 Lonicera japonica HOM05D003359 ORTHO05D004472 8.1e-45 184.1 129 64.3
PGSC0003DMG400011728 Solanum tuberosum HOM05D003359 ORTHO05D004472 8.1e-45 184.1 153 58.2
QL03p057097 Quercus lobata HOM05D003359 ORTHO05D004472 2.3e-44 182.6 136 61.8
Aqoxy3G01254 Aquilegia oxysepala HOM05D003359 ORTHO05D004472 4.0e-44 181.8 129 63.6
HanXRQChr08g0208381 Helianthus annuus HOM05D003359 ORTHO05D004472 6.8e-44 181.0 129 63.6
MD13G1098400 Malus domestica HOM05D003359 ORTHO05D004472 6.8e-44 181.0 133 60.9
QL03p056989 Quercus lobata HOM05D003359 ORTHO05D004472 8.9e-44 180.6 136 61.8
Lalb_Chr04g0250081 Lupinus albus HOM05D003359 ORTHO05D004472 5.8e-43 177.9 129 61.2
unitig_22.g6428 Utricularia gibba HOM05D003359 ORTHO05D004472 7.5e-43 177.6 129 61.2
Aqoxy5G03710 Aquilegia oxysepala HOM05D003359 ORTHO05D004472 1.3e-42 176.8 129 61.2
Lalb_Chr04g0250051 Lupinus albus HOM05D003359 ORTHO05D004472 2.2e-42 176.0 132 59.8
Lalb_Chr04g0250071 Lupinus albus HOM05D003359 ORTHO05D004472 2.9e-42 175.6 129 60.5
VMungo0647G2422 Vigna mungo HOM05D003359 ORTHO05D000417 3.7e-42 175.3 135 58.5
Os01g0518500 Oryza sativa ssp. japonica HOM05D003359 ORTHO05D004472 1.1e-41 173.7 129 58.9
Glyma.14G049900 Glycine max HOM05D003359 ORTHO05D004472 1.4e-41 173.3 136 58.1
ATR0824G255 Amborella trichopoda HOM05D003359 ORTHO05D004472 2.4e-41 172.6 129 58.1
Ciclev10003125m.g Citrus clementina HOM05D003359 ORTHO05D004472 2.4e-41 172.6 130 59.2
Glyma.02G267700 Glycine max HOM05D003359 ORTHO05D004472 4.1e-41 171.8 136 57.4
SEGI_37368 Sequoiadendron giganteum HOM05D003359 ORTHO05D004472 2.1e-40 169.5 136 55.1
Zm00001eb409230 Zea mays HOM05D003359 ORTHO05D004472 2.1e-40 169.5 129 56.6
ECA233G4229 Erigeron canadensis HOM05D003359 ORTHO05D004472 3.5e-40 168.7 129 58.9
SMO356G0596 Selaginella moellendorffii HOM05D003359 ORTHO05D004472 1.5e-38 163.3 138 56.5
TPR.G6289 Trifolium pratense HOM05D003359 ORTHO05D004472 1.5e-38 163.3 109 63.3
LjContig00029g0017310 Lotus japonicus HOM05D003359 ORTHO05D004472 1.9e-38 162.9 135 55.6
Pp3c11_18080 Physcomitrium patens HOM05D003359 ORTHO05D004472 1.9e-38 162.9 137 54.7
SMO164G0149 Selaginella moellendorffii HOM05D003359 ORTHO05D004472 2.5e-38 162.5 138 54.3
Phvul.008G214500 Phaseolus vulgaris HOM05D003359 ORTHO05D004472 3.3e-38 162.2 136 54.4
SGA_v2.0_scaffold71G23972 Striga asiatica HOM05D003359 ORTHO05D004472 4.3e-38 161.8 128 57.0
Mapoly0033s0125 Marchantia polymorpha HOM05D003359 ORTHO05D004472 1.2e-37 160.2 131 56.5
SEGI_05831 Sequoiadendron giganteum HOM05D003359 ORTHO05D004472 1.6e-37 159.8 129 56.6
HPP92_023372 Vanilla planifolia HOM05D003359 ORTHO05D004472 1.6e-37 159.8 129 54.3
arahy.Tifrunner.gnm1.ann1.H4Q06R Arachis hypogaea HOM05D003359 ORTHO05D004472 6.2e-37 157.9 138 62.3
EL10Ac6g13871 Beta vulgaris HOM05D003359 ORTHO05D004472 6.2e-37 157.9 129 59.7
HPP92_023360 Vanilla planifolia HOM05D003359 ORTHO05D004472 6.2e-37 157.9 129 55.0
HPP92_023373 Vanilla planifolia HOM05D003359 ORTHO05D004472 6.2e-37 157.9 129 55.0
RcHm_v2.0_Chr3g0454341 Rosa chinensis HOM05D003359 ORTHO05D004472 5.2e-36 154.8 129 58.1
Mapoly0016s0175 Marchantia polymorpha HOM05D003359 ORTHO05D004472 4.4e-35 151.8 134 51.5
FvH4_6g05560 Fragaria vesca HOM05D003359 ORTHO05D004472 7.6e-35 151.0 134 56.0
FAN14G5485 Fragaria x ananassa HOM05D003359 ORTHO05D004472 4.9e-34 148.3 127 55.9
Sabra08G0140300 Salix brachista HOM05D003359 ORTHO05D006537 8.4e-34 147.5 129 53.5
AagrBONN_evm.TU.Sc2ySwM_362.590 Anthoceros agrestis HOM05D003359 ORTHO05D004472 1.2e-32 143.7 137 48.2
FAN09G1504 Fragaria x ananassa HOM05D003359 ORTHO05D004472 1.6e-32 143.3 136 52.9
TPR.G15855 Trifolium pratense HOM05D003359 ORTHO05D004472 1.0e-31 140.6 112 57.1
SMO238G0039 Selaginella moellendorffii HOM05D003359 ORTHO05D004472 1.7e-31 139.8 138 51.4
FAN14G4241 Fragaria x ananassa HOM05D003359 ORTHO05D004472 3.0e-31 139.0 152 48.7
CiPaw.11G025500 Carya illinoinensis HOM05D003359 ORTHO05D004472 5.1e-31 138.3 86 69.8
QL08p013016 Quercus lobata HOM05D003359 ORTHO05D019577 1.5e-30 136.7 91 67.0
FAN05G3491 Fragaria x ananassa HOM05D003359 ORTHO05D004472 6.2e-29 131.3 143 46.9
ClCG08G017630 Citrullus lanatus HOM05D003359 ORTHO05D004472 3.1e-28 129.0 78 73.1
SMO147G0306 Selaginella moellendorffii HOM05D003359 ORTHO05D004472 4.0e-28 128.6 133 44.4
CDE02G4268 Ceratophyllum demersum HOM05D003359 ORTHO05D004472 1.2e-27 127.1 158 44.9
PGR119G1467 Punica granatum HOM05D003359 ORTHO05D004472 1.2e-27 127.1 86 64.0
TWI36G0326 Tripterygium wilfordii HOM05D003359 ORTHO05D004472 2.2e-26 122.9 132 50.0
QL08p013031 Quercus lobata HOM05D003359 ORTHO05D004472 9.3e-25 117.5 76 72.4
AUR62005279 Chenopodium quinoa HOM05D003359 ORTHO05D004472 4.6e-24 115.2 65 80.0
AagrBONN_evm.TU.Sc2ySwM_228.5836 Anthoceros agrestis HOM05D003359 ORTHO05D004472 1.1e-22 110.5 138 42.0
VMungo1383G2745 Vigna mungo HOM05D003359 ORTHO05D005153 9.0e-20 100.9 97 50.5
ATR0824G135 Amborella trichopoda HOM05D003359 ORTHO05D019577 3.8e-18 95.5 96 49.0
FAN05G1630 Fragaria x ananassa HOM05D003359 ORTHO05D004472 1.9e-17 93.2 143 40.6
Lj3C275T6 Lonicera japonica HOM05D003359 ORTHO05D004472 1.6e-16 90.1 69 59.4
Lj3P287T13 Lonicera japonica HOM05D003359 ORTHO05D019577 1.7e-15 86.7 63 60.3
Ciclev10033489m.g Citrus clementina HOM05D003359 ORTHO05D004472 9.0e-12 74.3 58 62.1
Lju551A3T2 Lonicera japonica HOM05D003359 ORTHO05D019577 6.4e-10 68.2 109 35.8
Glyma.02G267600 Glycine max HOM05D003359 ORTHO05D019577 1.1e-09 67.4 53 62.3
Cc01_g04790 Coffea canephora HOM05D003359 ORTHO05D004472 1.0e-07 60.8 46 60.9
Medtr8g089780 Medicago truncatula HOM05D003359 ORTHO05D020488 1.3e-07 60.5 35 68.6
Cc01_g04800 Coffea canephora HOM05D003359 ORTHO05D153994 6.7e-07 58.2 40 55.0


User provided reference genes

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