Gene: TPR.G6289
General Information
Structural Information
- Species Trifolium pratense
- Gene Identifier TPR.G6289
- Transcript Identifier TPR.T6509
- Gene Type Coding gene
- Location Tp57577_TGAC_v2_LG3 : 5491852-5493942 : positive
Gene Family Information
- ID HOM05D003359
- #Genes/#Species 204/92
- Phylogenetic origin
- ID ORTHO05D004472
- #Genes/#Species 179/89
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Tp57577_TGAC_v2_mRNA6509.v2
- id Tp57577_TGAC_v2_gene6289.v2
- pacid 35987380
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:0010405 | ISO | PLAZA Integrative Orthology | arabinogalactan protein metabolic process | AT3G26380 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0030247 | ISO | PLAZA Integrative Orthology | polysaccharide binding | AT3G26380 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT3G26380 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR035992 | Ricin B-like lectins |
| IPR041233 | Alpha galactosidase, C-terminal beta sandwich domain |
| IPR013780 | Glycosyl hydrolase, all-beta |
| IPR017853 | Glycoside hydrolase superfamily |
| IPR002241 | Glycoside hydrolase, family 27 |
| IPR013785 | Aldolase-type TIM barrel |
| IPR000772 | Ricin B, lectin domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |