Gene: Nitab4.5_0002787g0030

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0002787g0030
  • Transcript Identifier Nitab4.5_0002787g0030.1
  • Gene Type Coding gene
  • Location Nitab4.5_0002787 : 189498-194351 : positive

Gene Family Information

  • ID HOM05D003359
  • #Genes/#Species 204/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0002787g0030.1
  • SR1-identifier Nta19g12680.1

Descriptions

  • Description Glycosyl hydrolase, family 13, all-beta, Ricin B lectin domain, Glycoside hydrolase, family 27, Aldolase-type TIM barrel, Glycoside hydrolase, superfamily
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0010405
ISO
PLAZA Integrative Orthologyarabinogalactan protein metabolic process AT3G26380

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0003824
IEA
InterProcatalytic activity
GO:0030247
ISO
PLAZA Integrative Orthologypolysaccharide binding AT3G26380

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT3G26380

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041233 Alpha galactosidase, C-terminal beta sandwich domain
IPR002241 Glycoside hydrolase, family 27
IPR000772 Ricin B, lectin domain
IPR035992 Ricin B-like lectins
IPR017853 Glycoside hydrolase superfamily
IPR013780 Glycosyl hydrolase, all-beta
IPR013785 Aldolase-type TIM barrel
Mapman id Description
35.1 not assigned.annotated