Gene: COL.COLO4_23483

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_23483
  • Transcript Identifier COL.rna22223
  • Gene Type Coding gene
  • Location AWUE01018252.1 : 21651-25290 : negative

Gene Family Information

  • ID HOM05D003359
  • #Genes/#Species 204/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna22223
  • GenBank OMO81600.1
  • id gene23455
  • gene_name COLO4_23483
  • uniprot A0A1R3IGA3

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008152
IEA
GOA Databasemetabolic process
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0010405
ISO
PLAZA Integrative Orthologyarabinogalactan protein metabolic process AT3G26380

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0052692
IEA
GOA Databaseraffinose alpha-galactosidase activity
GO:0004557
IEA
GOA Databasealpha-galactosidase activity
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0004553
IEA
GOA Databasehydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0030247
ISO
PLAZA Integrative Orthologypolysaccharide binding AT3G26380

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT3G26380

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013785 Aldolase-type TIM barrel
IPR002241 Glycoside hydrolase, family 27
IPR017853 Glycoside hydrolase superfamily
Mapman id Description
35.1 not assigned.annotated