Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.A8XVJK Arachis hypogaea HOM05D006029 ORTHO05D007439 1.2e-183 646.4 320 100.0
arahy.Tifrunner.gnm1.ann1.ZU3BRN Arachis hypogaea HOM05D006029 ORTHO05D007439 1.2e-63 247.7 112 100.0
Lalb_Chr04g0261421 Lupinus albus HOM05D006029 ORTHO05D007439 1.5e-53 214.2 112 81.2
Lj1g0014790 Lotus japonicus HOM05D006029 ORTHO05D007439 3.3e-48 196.4 112 78.6
Lj1g0022243 Lotus japonicus HOM05D006029 ORTHO05D007439 3.3e-48 196.4 112 78.6
CiPaw.02G042300 Carya illinoinensis HOM05D006029 ORTHO05D007439 1.6e-47 194.1 112 73.2
Lj3g0023283 Lotus japonicus HOM05D006029 ORTHO05D007439 1.4e-46 191.0 110 79.1
Glyma.18G179600 Glycine max HOM05D006029 ORTHO05D007439 5.2e-46 189.1 110 74.5
Phvul.008G101000 Phaseolus vulgaris HOM05D006029 ORTHO05D007439 5.7e-45 185.7 112 74.1
Cfa010653 Carpinus fangiana HOM05D006029 ORTHO05D007439 7.5e-45 185.3 112 67.9
Psat3g005240 Pisum sativum HOM05D006029 ORTHO05D007439 7.5e-45 185.3 110 74.5
GSVIVG01027190001 Vitis vinifera HOM05D006029 ORTHO05D007439 2.2e-44 183.7 112 69.6
Rhsim01G0175700 Rhododendron simsii HOM05D006029 ORTHO05D007439 2.9e-44 183.3 112 69.6
Sed0019070 Sechium edule HOM05D006029 ORTHO05D007439 4.9e-44 182.6 112 67.9
vmacro12594 Vaccinium macrocarpon HOM05D006029 ORTHO05D007439 4.9e-44 182.6 112 69.6
CANSAT56G3403 Cannabis sativa HOM05D006029 ORTHO05D007439 8.3e-44 181.8 110 70.0
Glyma.07G131200 Glycine max HOM05D006029 ORTHO05D007439 8.3e-44 181.8 110 72.7
TPR.G4810 Trifolium pratense HOM05D006029 ORTHO05D007439 1.1e-43 181.4 110 74.5
ClCG10G013250 Citrullus lanatus HOM05D006029 ORTHO05D007439 3.2e-43 179.9 112 68.8
TWI36G0126 Tripterygium wilfordii HOM05D006029 ORTHO05D007439 3.2e-43 179.9 112 68.8
MELO3C026899.2 Cucumis melo HOM05D006029 ORTHO05D007439 2.0e-42 177.2 112 67.9
CsaV3_3G043380 Cucumis sativus L. HOM05D006029 ORTHO05D007439 2.0e-42 177.2 112 67.9
Ciclev10022957m.g Citrus clementina HOM05D006029 ORTHO05D007439 3.3e-40 169.9 110 65.5
PGR102G2016 Punica granatum HOM05D006029 ORTHO05D007439 3.3e-40 169.9 113 68.1
Eucgr.E03439 Eucalyptus grandis HOM05D006029 ORTHO05D007439 5.6e-40 169.1 113 67.3
Eucgr.E03441 Eucalyptus grandis HOM05D006029 ORTHO05D007439 5.6e-40 169.1 113 67.3
Eucgr.E03442 Eucalyptus grandis HOM05D006029 ORTHO05D007439 5.6e-40 169.1 113 67.3
Eucgr.L01751 Eucalyptus grandis HOM05D006029 ORTHO05D007439 5.6e-40 169.1 113 67.3
Gohir.D08G145300 Gossypium hirsutum HOM05D006029 ORTHO05D007439 5.6e-40 169.1 113 67.3
Gorai.004G150300 Gossypium raimondii HOM05D006029 ORTHO05D007439 1.2e-39 167.9 113 66.4
DCAR_006981 Daucus carota HOM05D006425 ORTHO05D007312 1.6e-39 167.5 120 60.0
Gohir.A08G124200 Gossypium hirsutum HOM05D006029 ORTHO05D007439 1.6e-39 167.5 113 66.4
Gohir.D12G270400 Gossypium hirsutum HOM05D006029 ORTHO05D007439 3.6e-39 166.4 113 65.5
Gorai.008G290700 Gossypium raimondii HOM05D006029 ORTHO05D007439 3.6e-39 166.4 113 65.5
Peaxi162Scf00156g00617 Petunia axillaris HOM05D006029 ORTHO05D007439 6.2e-39 165.6 112 61.6
Manes.01G243500 Manihot esculenta HOM05D006029 ORTHO05D007439 1.8e-38 164.1 113 64.6
Cc06_g21100 Coffea canephora HOM05D006029 ORTHO05D007439 2.3e-38 163.7 113 61.9
Sed0007850 Sechium edule HOM05D006029 ORTHO05D007439 2.3e-38 163.7 112 62.5
Cc00_g02440 Coffea canephora HOM05D006029 ORTHO05D007439 5.2e-38 162.5 113 61.9
HanXRQChr05g0130881 Helianthus annuus HOM05D006029 ORTHO05D007439 5.2e-38 162.5 117 63.2
TAR374G1259 Trochodendron aralioides HOM05D006029 ORTHO05D007439 5.2e-38 162.5 112 64.3
COL.COLO4_06245 Corchorus olitorius HOM05D006029 ORTHO05D007439 6.8e-38 162.2 113 61.9
Haze_03591 Corylus avellana HOM05D004263 ORTHO05D004931 1.2e-37 161.4 97 69.1
Gohir.A12G269900 Gossypium hirsutum HOM05D006029 ORTHO05D007439 1.5e-37 161.0 113 63.7
Solyc05g055890.3 Solanum lycopersicum HOM05D006029 ORTHO05D007439 1.5e-37 161.0 112 60.7
Sopen05g034290 Solanum pennellii HOM05D006029 ORTHO05D007439 1.5e-37 161.0 112 60.7
Duzib138G0795 Durio zibethinus HOM05D006029 ORTHO05D007439 2.6e-37 160.2 113 64.6
Lsat_1_v5_gn_4_30800 Lactuca sativa HOM05D006029 ORTHO05D007439 7.5e-37 158.7 113 65.5
Medtr7g116750 Medicago truncatula HOM05D006029 ORTHO05D007439 1.3e-36 157.9 116 60.3
PGSC0003DMG402023468 Solanum tuberosum HOM05D006029 ORTHO05D007439 1.3e-36 157.9 112 58.9
Medtr5g030180 Medicago truncatula HOM05D006029 ORTHO05D007439 2.9e-36 156.8 115 62.6
MSTRG.17362 Avicennia marina HOM05D006029 ORTHO05D007439 4.9e-36 156.0 113 62.8
CAN.G694.9 Capsicum annuum HOM05D006029 ORTHO05D007439 4.9e-36 156.0 112 59.8
Oeu043218.1 Olea europaea HOM05D006029 ORTHO05D007439 6.4e-36 155.6 112 57.1
Thecc.01G338500 Theobroma cacao HOM05D006029 ORTHO05D007439 6.4e-36 155.6 115 64.3
Hma1.2p1_1482F.1_g286210 Hydrangea macrophylla HOM05D006029 ORTHO05D007439 1.4e-35 154.5 112 58.9
MD01G1085300 Malus domestica HOM05D006029 ORTHO05D007439 2.4e-35 153.7 108 62.0
Potri.012G015900 Populus trichocarpa HOM05D006029 ORTHO05D007439 2.4e-35 153.7 113 59.3
Sabra12G0016400 Salix brachista HOM05D006029 ORTHO05D007439 5.4e-35 152.5 113 58.4
unitig_60.g25801 Utricularia gibba HOM05D006029 ORTHO05D007439 2.0e-34 150.6 112 56.2
Peaxi162Scf00740g00556 Petunia axillaris HOM05D006029 ORTHO05D007439 6.0e-34 149.1 102 60.8
Prupe.2G192900 Prunus persica HOM05D006029 ORTHO05D007439 1.7e-33 147.5 108 59.3
CSS0011460 Camellia sinensis var. sinensis HOM05D006029 ORTHO05D007439 2.3e-33 147.1 95 65.3
Sc02g0002910 Simmondsia chinensis HOM05D006029 ORTHO05D007439 2.3e-33 147.1 112 57.1
Nn1g00349 Nelumbo nucifera HOM05D006029 ORTHO05D007439 3.9e-33 146.4 113 57.5
RcHm_v2.0_Chr1g0360471 Rosa chinensis HOM05D006029 ORTHO05D007439 5.0e-33 146.0 108 59.3
BolC8t52870H Brassica oleracea HOM05D006029 ORTHO05D007439 6.6e-33 145.6 121 53.7
AT4G07950 Arabidopsis thaliana HOM05D006029 ORTHO05D007439 1.1e-32 144.8 112 59.8
FvH4_7g17060 Fragaria vesca HOM05D006029 ORTHO05D007439 1.1e-32 144.8 108 57.4
FAN01G1288 Fragaria x ananassa HOM05D006029 ORTHO05D007439 1.1e-32 144.8 108 57.4
FAN03G2913 Fragaria x ananassa HOM05D006029 ORTHO05D007439 1.1e-32 144.8 108 57.4
FAN06G2526 Fragaria x ananassa HOM05D006029 ORTHO05D007439 1.1e-32 144.8 108 57.4
FAN06G3186 Fragaria x ananassa HOM05D006029 ORTHO05D007439 1.1e-32 144.8 108 57.4
FAN10G2808 Fragaria x ananassa HOM05D006029 ORTHO05D007439 1.1e-32 144.8 108 57.4
FAN10G3748 Fragaria x ananassa HOM05D006029 ORTHO05D007439 1.1e-32 144.8 108 57.4
A09p68990 Brassica napus HOM05D006029 ORTHO05D007439 1.9e-32 144.1 120 54.2
BraA09t42236Z Brassica rapa HOM05D006029 ORTHO05D007439 1.9e-32 144.1 120 54.2
Hund17067 Selenicereus undatus HOM05D006029 ORTHO05D007439 4.3e-32 142.9 116 57.8
Carub.0003s3000 Capsella rubella HOM05D006029 ORTHO05D007439 7.3e-32 142.1 112 58.9
HanXRQChr17g0563271 Helianthus annuus HOM05D006029 ORTHO05D007439 7.3e-32 142.1 104 62.5
AL1G11270 Arabidopsis lyrata HOM05D006029 ORTHO05D007439 9.5e-32 141.7 112 58.0
AT1G01210 Arabidopsis thaliana HOM05D006029 ORTHO05D007439 1.6e-31 141.0 112 58.0
Migut.B01899 Erythranthe guttata HOM05D006029 ORTHO05D007439 2.8e-31 140.2 114 57.0
Thhalv10009170m.g Eutrema salsugineum HOM05D006029 ORTHO05D007439 3.6e-31 139.8 112 56.2
CARHR001260 Cardamine hirsuta HOM05D006029 ORTHO05D007439 4.7e-31 139.4 112 58.0
BcaC07g42429 Brassica carinata HOM05D006029 ORTHO05D007439 6.2e-31 139.0 112 55.4
A03p11160 Brassica napus HOM05D000069 ORTHO05D021930 6.2e-31 139.0 112 55.4
A09p39050 Brassica napus HOM05D006029 ORTHO05D007439 6.2e-31 139.0 112 55.4
BolC3t13750H Brassica oleracea HOM05D006029 ORTHO05D007439 6.2e-31 139.0 112 55.4
BraA03t10431Z Brassica rapa HOM05D006029 ORTHO05D007439 6.2e-31 139.0 112 55.4
EL10Ac5g10924 Beta vulgaris HOM05D006029 ORTHO05D007439 1.8e-30 137.5 132 53.0
BraA09t39405Z Brassica rapa HOM05D006029 ORTHO05D007439 1.8e-30 137.5 112 54.5
HPP92_017871 Vanilla planifolia HOM05D006029 ORTHO05D007439 1.8e-30 137.5 112 52.7
Lsat_1_v5_gn_7_7741 Lactuca sativa HOM05D006029 ORTHO05D007439 4.0e-30 136.3 112 60.7
C03p12870 Brassica napus HOM05D006029 ORTHO05D007439 5.2e-30 136.0 112 54.5
SGA_v2.0_scaffold22G09953 Striga asiatica HOM05D006029 ORTHO05D007439 8.9e-30 135.2 113 55.8
Sp1g01080 Schrenkiella parvula HOM05D006029 ORTHO05D007439 1.2e-29 134.8 112 55.4
Haze_15690 Corylus avellana HOM05D006029 ORTHO05D007439 2.0e-29 134.0 86 64.0
Os02g0672700 Oryza sativa ssp. japonica HOM05D006029 ORTHO05D007439 3.4e-29 133.3 113 54.0
THA.LOC104815886 Tarenaya hassleriana HOM05D006029 ORTHO05D007439 1.3e-28 131.3 112 53.6
Cpa.g.sc96.66 Carica papaya HOM05D006029 ORTHO05D007439 4.9e-28 129.4 113 54.9
Lsat_1_v5_gn_6_63820 Lactuca sativa HOM05D006029 ORTHO05D007439 8.3e-28 128.6 139 50.4
PSO170G0977 Papaver somniferum HOM05D006029 ORTHO05D007439 1.1e-27 128.3 113 54.0
PSO782G1905 Papaver somniferum HOM05D006029 ORTHO05D007439 1.9e-27 127.5 113 53.1
PSO782G2649 Papaver somniferum HOM05D006029 ORTHO05D007439 1.9e-27 127.5 113 53.1
PSO782G4464 Papaver somniferum HOM05D006029 ORTHO05D007439 1.9e-27 127.5 113 53.1
Zm00001eb187060 Zea mays HOM05D006029 ORTHO05D007439 9.2e-27 125.2 113 51.3
Nitab4.5_0000476g0280 Nicotiana tabacum HOM05D006029 ORTHO05D007439 2.7e-26 123.6 85 60.0
Pp3c15_5550 Physcomitrium patens HOM05D006029 ORTHO05D007439 3.5e-26 123.2 113 47.8
Aa31LG1G10580 Aethionema arabicum HOM05D006029 ORTHO05D007439 1.0e-25 121.7 112 49.1
AagrBONN_evm.TU.Sc2ySwM_117.3630 Anthoceros agrestis HOM05D006029 ORTHO05D007439 3.3e-24 116.7 112 48.2
QL08p046069 Quercus lobata HOM05D006029 ORTHO05D007439 2.1e-23 114.0 64 75.0
ATR0751G147 Amborella trichopoda HOM05D006029 ORTHO05D007439 6.2e-23 112.5 113 48.7
Dinv34229 Davidia involucrata HOM05D006425 ORTHO05D007312 1.2e-21 108.2 70 67.1
Aqoxy4G03109 Aquilegia oxysepala HOM05D006029 ORTHO05D007439 2.6e-21 107.1 113 46.9
Rhsim07G0002100 Rhododendron simsii HOM05D006029 ORTHO05D007439 2.6e-21 107.1 74 64.9
Cre02.g102400 Chlamydomonas reinhardtii HOM05D006029 ORTHO05D007439 1.7e-20 104.4 112 42.0
Mapoly0101s0063 Marchantia polymorpha HOM05D006029 ORTHO05D007439 2.2e-20 104.0 111 43.2
Nitab4.5_0009816g0020 Nicotiana tabacum HOM05D006029 ORTHO05D007439 2.9e-20 103.6 76 56.6
Atru.chr5.715 Acer truncatum HOM05D006029 ORTHO05D007439 9.2e-19 98.6 79 57.0
Lsat_1_v5_gn_6_81300 Lactuca sativa HOM05D006029 ORTHO05D007439 7.8e-18 95.5 68 63.2
SMO159G0009 Selaginella moellendorffii HOM05D006029 ORTHO05D007439 5.1e-17 92.8 113 42.5
Ca_09543_v3 Cicer arietinum L. HOM05D006029 ORTHO05D007439 6.6e-17 92.4 68 64.7
vmacro23448 Vaccinium macrocarpon HOM05D006029 ORTHO05D007439 6.6e-17 92.4 64 64.1
MCO11G240 Micromonas commoda HOM05D006029 ORTHO05D007439 3.3e-16 90.1 112 39.3
Cc08_g08090 Coffea canephora HOM05D006029 ORTHO05D007439 1.2e-15 88.2 55 63.6
CBR_g49523 Chara braunii HOM05D006029 ORTHO05D007439 6.2e-15 85.9 93 39.8
Carub.0003s3001 Capsella rubella HOM05D003869 ORTHO05D004718 4.0e-14 83.2 71 53.5
SMO347G0197 Selaginella moellendorffii HOM05D006029 ORTHO05D007439 9.9e-13 78.6 113 36.3
CBR_g31408 Chara braunii HOM05D006029 ORTHO05D007439 6.6e-09 65.9 71 38.0
Mapoly0087s0071 Marchantia polymorpha HOM05D004365 ORTHO05D005123 1.3e-07 61.6 121 26.4
PRCOL_00000799 Prasinoderma coloniale HOM05D006029 ORTHO05D007439 4.8e-07 59.7 95 35.8
Medtr3g102420 Medicago truncatula HOM05D005168 ORTHO05D006358 1.4e-06 58.2 119 32.8
TWI53G1753 Tripterygium wilfordii HOM05D004365 ORTHO05D005123 1.4e-06 58.2 117 27.4
A09p28560 Brassica napus HOM05D004365 ORTHO05D005123 2.4e-06 57.4 119 28.6
CARHR092230 Cardamine hirsuta HOM05D004365 ORTHO05D005123 9.0e-06 55.5 121 26.4


User provided reference genes

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