Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.3Z2F0I Arachis hypogaea HOM05D004664 ORTHO05D005526 5.9e-214 747.3 378 100.0
arahy.Tifrunner.gnm1.ann1.6YF458 Arachis hypogaea HOM05D004664 ORTHO05D005526 2.0e-185 652.5 440 78.6
arahy.Tifrunner.gnm1.ann1.U25ASJ Arachis hypogaea HOM05D004664 ORTHO05D005526 2.8e-184 648.7 446 77.4
Glyma.07G270100 Glycine max HOM05D004664 ORTHO05D005526 1.3e-123 447.2 440 57.0
VMungo1215G0123 Vigna mungo HOM05D004664 ORTHO05D005526 2.1e-123 446.4 441 55.8
Lj6g0004292 Lotus japonicus HOM05D004664 ORTHO05D005526 6.2e-123 444.9 444 54.1
Phvul.003G154500 Phaseolus vulgaris HOM05D004664 ORTHO05D005526 3.1e-122 442.6 440 55.7
Lj4g0012990 Lotus japonicus HOM05D004664 ORTHO05D005526 4.0e-122 442.2 443 53.5
Lalb_Chr04g0264741 Lupinus albus HOM05D004664 ORTHO05D005526 1.3e-120 437.2 444 53.4
Psat0s2550g0080 Pisum sativum HOM05D004664 ORTHO05D005526 5.8e-113 411.8 433 53.6
TPR.G5994 Trifolium pratense HOM05D004664 ORTHO05D005526 1.1e-111 407.5 455 53.2
Medtr1g043000 Medicago truncatula HOM05D004664 ORTHO05D005526 3.4e-105 386.0 440 51.4
Medtr8g042940 Medicago truncatula HOM05D004664 ORTHO05D005526 2.8e-99 366.3 438 50.0
Medtr4g134340 Medicago truncatula HOM05D004664 ORTHO05D005526 1.4e-98 364.0 434 50.5
Atru.chr1.2210 Acer truncatum HOM05D004664 ORTHO05D005526 5.7e-92 342.0 430 45.8
CiPaw.05G165700 Carya illinoinensis HOM05D004664 ORTHO05D005526 8.2e-91 338.2 480 42.7
Haze_07058 Corylus avellana HOM05D004664 ORTHO05D005526 6.9e-90 335.1 460 46.1
TWI63G0464 Tripterygium wilfordii HOM05D004664 ORTHO05D005526 7.7e-89 331.6 471 42.5
Prupe.3G183500 Prunus persica HOM05D004664 ORTHO05D005526 6.5e-88 328.6 441 44.0
TAR636G0408 Trochodendron aralioides HOM05D004664 ORTHO05D005526 3.2e-87 326.2 492 39.4
Thecc.08G197000 Theobroma cacao HOM05D004664 ORTHO05D005526 1.6e-86 323.9 470 41.5
TWI38G1364 Tripterygium wilfordii HOM05D004664 ORTHO05D005526 1.4e-85 320.9 505 40.0
QL05p066226 Quercus lobata HOM05D004664 ORTHO05D005526 3.0e-85 319.7 481 40.7
COL.COLO4_20401 Corchorus olitorius HOM05D004664 ORTHO05D005526 1.1e-84 317.8 472 41.9
Ciclev10015263m.g Citrus clementina HOM05D004664 ORTHO05D005526 2.0e-84 317.0 450 43.8
Gohir.D05G311400 Gossypium hirsutum HOM05D004664 ORTHO05D005526 2.6e-84 316.6 474 40.3
Potri.015G143000 Populus trichocarpa HOM05D004664 ORTHO05D005526 2.6e-84 316.6 473 40.0
Dinv01695 Davidia involucrata HOM05D004664 ORTHO05D005526 5.7e-84 315.5 471 40.6
Gorai.009G332500 Gossypium raimondii HOM05D004664 ORTHO05D005526 5.7e-84 315.5 474 40.1
Duzib268G1219 Durio zibethinus HOM05D004664 ORTHO05D005526 2.8e-83 313.2 489 40.3
Gohir.A05G310600 Gossypium hirsutum HOM05D004664 ORTHO05D005526 9.1e-82 308.1 461 40.6
FAN18G2840 Fragaria x ananassa HOM05D004664 ORTHO05D005526 4.5e-81 305.8 451 41.5
Dinv11048 Davidia involucrata HOM05D004664 ORTHO05D005526 2.2e-80 303.5 472 39.8
MD17G1131000 Malus domestica HOM05D004664 ORTHO05D005526 8.5e-80 301.6 489 38.7
TAR633G0600 Trochodendron aralioides HOM05D004664 ORTHO05D005526 8.5e-80 301.6 494 38.3
Manes.08G015000 Manihot esculenta HOM05D004664 ORTHO05D005526 4.2e-79 299.3 495 38.0
PSO541G3178 Papaver somniferum HOM05D004664 ORTHO05D005526 1.2e-78 297.7 500 36.4
MBI15_g26850_MAGBIO Magnolia biondii HOM05D004664 ORTHO05D005526 2.1e-78 297.0 494 38.1
PSO675G1009 Papaver somniferum HOM05D004664 ORTHO05D005526 2.7e-78 296.6 500 36.4
Sopen10g004780 Solanum pennellii HOM05D004664 ORTHO05D005526 1.0e-77 294.7 427 39.6
Hma1.2p1_0277F.1_g111600 Hydrangea macrophylla HOM05D004664 ORTHO05D005526 5.7e-76 288.9 455 39.3
Sabra08G0019200 Salix brachista HOM05D004664 ORTHO05D005526 1.3e-75 287.7 542 35.4
Cc07_g14650 Coffea canephora HOM05D004664 ORTHO05D005526 8.2e-75 285.0 459 36.4
RcHm_v2.0_Chr7g0230211 Rosa chinensis HOM05D004664 ORTHO05D005526 3.1e-74 283.1 450 39.8
CsaV3_1G046480 Cucumis sativus L. HOM05D004664 ORTHO05D005526 5.3e-74 282.3 451 38.1
MELO3C017782.2 Cucumis melo HOM05D004664 ORTHO05D005526 3.5e-73 279.6 452 37.4
Aqoxy1G03457 Aquilegia oxysepala HOM05D004664 ORTHO05D005526 5.9e-73 278.9 436 39.0
Migut.H01639 Erythranthe guttata HOM05D004664 ORTHO05D005526 5.9e-73 278.9 470 36.4
CANSAT64G2239 Cannabis sativa HOM05D004664 ORTHO05D005526 7.7e-73 278.5 542 35.1
Ca_04223_v3 Cicer arietinum L. HOM05D004664 ORTHO05D005526 8.5e-72 275.0 263 59.3
MELO3C021804.2 Cucumis melo HOM05D004664 ORTHO05D005526 2.5e-71 273.5 466 36.3
PGR004G1760 Punica granatum HOM05D004664 ORTHO05D005526 5.5e-71 272.3 549 34.4
SGA_v2.0_scaffold239G43984 Striga asiatica HOM05D004664 ORTHO05D005526 5.5e-71 272.3 489 35.6
Solyc10g009000.4 Solanum lycopersicum HOM05D004664 ORTHO05D005526 1.6e-70 270.8 436 38.1
EL10Ac3g07399 Beta vulgaris HOM05D004664 ORTHO05D005526 2.7e-70 270.0 449 37.4
Sc25g0005660 Simmondsia chinensis HOM05D004664 ORTHO05D005526 4.7e-70 269.2 487 35.5
CAN.G413.16 Capsicum annuum HOM05D004664 ORTHO05D005526 1.8e-69 267.3 477 35.0
SEGI_33972 Sequoiadendron giganteum HOM05D004664 ORTHO05D005526 8.8e-69 265.0 472 35.2
Eucgr.D00971 Eucalyptus grandis HOM05D004664 ORTHO05D005526 1.3e-67 261.2 345 43.5
CAN.G567.108 Capsicum annuum HOM05D004664 ORTHO05D005526 3.7e-67 259.6 484 34.5
Carub.0004s0328 Capsella rubella HOM05D004664 ORTHO05D005526 4.8e-67 259.2 436 39.4
Cpa.g.sc27.187 Carica papaya HOM05D004664 ORTHO05D005526 2.4e-66 256.9 469 36.0
BcaB03g12095 Brassica carinata HOM05D004664 ORTHO05D005526 3.1e-66 256.5 438 37.7
Hund19039 Selenicereus undatus HOM05D004664 ORTHO05D005526 5.3e-66 255.8 480 35.0
FAN05G0490 Fragaria x ananassa HOM05D004664 ORTHO05D005526 7.0e-66 255.4 519 33.1
Lsat_1_v5_gn_4_109780 Lactuca sativa HOM05D004664 ORTHO05D005526 1.6e-65 254.2 442 37.3
C03p75380 Brassica napus HOM05D004664 ORTHO05D005526 3.5e-65 253.1 470 36.8
HanXRQChr15g0489541 Helianthus annuus HOM05D004664 ORTHO05D005526 5.9e-65 252.3 477 35.4
BcaC01g00070 Brassica carinata HOM05D004664 ORTHO05D005526 1.3e-64 251.1 471 36.5
CSS0003336 Camellia sinensis var. sinensis HOM05D004664 ORTHO05D005526 2.2e-64 250.4 344 41.6
BolC3t19796H Brassica oleracea HOM05D004664 ORTHO05D005526 2.9e-64 250.0 470 36.4
Nitab4.5_0003942g0040 Nicotiana tabacum HOM05D004664 ORTHO05D005526 5.0e-64 249.2 448 35.7
RcHm_v2.0_Chr2g0153021 Rosa chinensis HOM05D004664 ORTHO05D005526 5.0e-64 249.2 584 31.5
vmacro21384 Vaccinium macrocarpon HOM05D004664 ORTHO05D005526 8.5e-64 248.4 544 34.4
Sp5g19680 Schrenkiella parvula HOM05D004664 ORTHO05D005526 1.5e-63 247.7 388 39.9
ECA238G0224 Erigeron canadensis HOM05D004664 ORTHO05D005526 3.2e-63 246.5 473 35.9
Cfa002678 Carpinus fangiana HOM05D004664 ORTHO05D005526 1.2e-62 244.6 275 51.3
unitig_22.g5707 Utricularia gibba HOM05D004664 ORTHO05D005526 1.2e-62 244.6 432 35.6
FvH4_6g39210 Fragaria vesca HOM05D004664 ORTHO05D005526 1.6e-62 244.2 587 30.8
FAN02G1202 Fragaria x ananassa HOM05D004664 ORTHO05D005526 1.0e-61 241.5 588 30.8
AUR62028851 Chenopodium quinoa HOM05D004664 ORTHO05D005526 1.8e-61 240.7 454 34.4
Medtr4g064230 Medicago truncatula HOM05D004664 ORTHO05D005526 4.0e-61 239.6 250 54.4
Oeu016938.2 Olea europaea HOM05D004664 ORTHO05D005526 4.0e-61 239.6 378 38.9
THA.LOC104809221 Tarenaya hassleriana HOM05D004664 ORTHO05D005526 4.0e-61 239.6 451 37.5
THA.LOC104803679 Tarenaya hassleriana HOM05D004664 ORTHO05D005526 8.8e-61 238.4 460 36.7
ClCG01G009110 Citrullus lanatus HOM05D004664 ORTHO05D005526 1.2e-60 238.0 434 34.6
A08p25430 Brassica napus HOM05D004664 ORTHO05D005526 2.0e-60 237.3 495 33.7
BraA08t34494Z Brassica rapa HOM05D004664 ORTHO05D005526 2.0e-60 237.3 498 33.9
Peaxi162Scf00530g00824 Petunia axillaris HOM05D004664 ORTHO05D005526 9.8e-60 235.0 390 36.2
FAN14G0080 Fragaria x ananassa HOM05D004664 ORTHO05D005526 1.3e-59 234.6 603 29.7
Aa31LG6G11170 Aethionema arabicum HOM05D004664 ORTHO05D005526 2.8e-59 233.4 418 37.8
CDE04G0808 Ceratophyllum demersum HOM05D004664 ORTHO05D005526 8.3e-59 231.9 481 32.4
Rhsim06G0067400 Rhododendron simsii HOM05D004664 ORTHO05D005526 1.4e-58 231.1 333 44.1
ATR0751G240 Amborella trichopoda HOM05D004664 ORTHO05D005526 3.5e-57 226.5 417 35.5
CiPaw.09G112800 Carya illinoinensis HOM05D004664 ORTHO05D005526 5.5e-55 219.2 268 45.5
Nitab4.5_0009068g0020 Nicotiana tabacum HOM05D004664 ORTHO05D005526 5.5e-55 219.2 474 32.3
Sed0026896 Sechium edule HOM05D004664 ORTHO05D005526 4.7e-54 216.1 395 34.7
AUR62005705 Chenopodium quinoa HOM05D004664 ORTHO05D005526 1.5e-52 211.1 472 33.3
Ah.04g149850 Amaranthus hybridus HOM05D000997 ORTHO05D000828 2.0e-52 210.7 462 33.1
Carub.0001s2702 Capsella rubella HOM05D004664 ORTHO05D005526 6.3e-51 205.7 386 37.3
Thhalv10008005m.g Eutrema salsugineum HOM05D004664 ORTHO05D005526 6.3e-51 205.7 328 39.6
Nn1g08288 Nelumbo nucifera HOM05D004664 ORTHO05D005526 6.3e-51 205.7 268 43.3
AL1G42190 Arabidopsis lyrata HOM05D004664 ORTHO05D005526 1.4e-50 204.5 315 42.2
Actinidia28954 Actinidia chinensis HOM05D004664 ORTHO05D005526 9.2e-50 201.8 301 40.9
Actinidia19274 Actinidia chinensis HOM05D004664 ORTHO05D005526 3.5e-49 199.9 420 34.3
AT1G28560 Arabidopsis thaliana HOM05D004664 ORTHO05D005526 5.9e-49 199.1 313 41.9
CARHR028060 Cardamine hirsuta HOM05D004664 ORTHO05D005526 1.3e-48 198.0 479 32.2
Sabra15G0152800 Salix brachista HOM05D007457 ORTHO05D006729 1.5e-47 194.5 431 33.2
GSVIVG01004332001 Vitis vinifera HOM05D004664 ORTHO05D005526 9.5e-47 191.8 244 43.0
GSVIVG01002826001 Vitis vinifera HOM05D004664 ORTHO05D005526 1.2e-46 191.4 244 42.6
PGSC0003DMG400022830 Solanum tuberosum HOM05D004664 ORTHO05D005526 8.9e-45 185.3 266 38.0
DCAR_024762 Daucus carota HOM05D004664 ORTHO05D005526 1.7e-40 171.0 274 38.7
Aqoxy5G01821 Aquilegia oxysepala HOM05D004664 ORTHO05D005526 2.3e-40 170.6 258 40.3
Lj6A128T19 Lonicera japonica HOM05D004664 ORTHO05D005526 3.3e-39 166.8 261 37.9
AagrBONN_evm.TU.Sc2ySwM_117.2257 Anthoceros agrestis HOM05D004664 ORTHO05D005526 2.1e-38 164.1 245 38.0
Os01g0912600 Oryza sativa ssp. japonica HOM05D004664 ORTHO05D005526 2.8e-38 163.7 262 38.9
Mapoly0028s0050 Marchantia polymorpha HOM05D004664 ORTHO05D005526 1.5e-36 157.9 308 32.8
ECA238G4413 Erigeron canadensis HOM05D004664 ORTHO05D005526 5.8e-36 156.0 402 32.3
DCAR_031515 Daucus carota HOM05D004664 ORTHO05D005526 9.8e-36 155.2 274 36.5
ECA247G2196 Erigeron canadensis HOM05D004664 ORTHO05D005526 1.4e-34 151.4 398 31.9
HPP92_017531 Vanilla planifolia HOM05D004664 ORTHO05D005526 6.0e-33 146.0 362 32.6
Pp3c2_3010 Physcomitrium patens HOM05D004664 ORTHO05D005526 5.6e-31 139.4 502 26.1
Lj1A1166T78 Lonicera japonica HOM05D004664 ORTHO05D005526 1.2e-30 138.3 218 37.6
Cc09_g09380 Coffea canephora HOM05D004664 ORTHO05D005526 1.1e-29 135.2 227 36.6
Actinidia04550 Actinidia chinensis HOM05D004664 ORTHO05D005526 1.4e-29 134.8 258 36.4
Cc09_g09390 Coffea canephora HOM05D004664 ORTHO05D005526 5.8e-28 129.4 96 58.3
GSVIVG01004331001 Vitis vinifera HOM05D004664 ORTHO05D005526 1.9e-26 124.4 194 41.2
Zm00001eb365000 Zea mays HOM05D006840 ORTHO05D008588 1.5e-23 114.8 480 26.9
Lj1A1166G81 Lonicera japonica HOM05D004664 ORTHO05D005526 5.6e-23 112.8 220 36.4
Sp1g24810 Schrenkiella parvula HOM05D004664 ORTHO05D005526 1.4e-21 108.2 80 58.8
Aqoxy1G03234 Aquilegia oxysepala HOM05D004664 ORTHO05D005526 1.2e-20 105.1 69 63.8
SMO358G0740 Selaginella moellendorffii HOM05D004664 ORTHO05D005526 2.6e-20 104.0 85 45.9
Lj6C128G4 Lonicera japonica HOM05D004664 ORTHO05D005526 3.4e-20 103.6 220 36.4
ECA238G2574 Erigeron canadensis HOM05D004664 ORTHO05D005526 1.1e-18 98.6 191 37.7
Duzib251G0924 Durio zibethinus HOM05D004664 ORTHO05D005526 1.2e-17 95.1 74 58.1
ECA237G0002 Erigeron canadensis HOM05D004664 ORTHO05D005526 6.0e-17 92.8 112 48.2
Nn1g08309 Nelumbo nucifera HOM05D004664 ORTHO05D005526 6.6e-16 89.4 90 53.3
Duzib251G0925 Durio zibethinus HOM05D004664 ORTHO05D005526 8.7e-16 89.0 92 48.9
CiPaw.09G112900 Carya illinoinensis HOM05D004664 ORTHO05D005526 5.6e-15 86.3 180 33.9
GSVIVG01004440001 Vitis vinifera HOM05D004664 ORTHO05D005526 5.6e-15 86.3 104 46.2
MCO08G225 Micromonas commoda HOM05D004664 ORTHO05D005526 9.6e-15 85.5 90 43.3
GSVIVG01004113001 Vitis vinifera HOM05D004664 ORTHO05D005526 6.2e-14 82.8 89 50.6
RcHm_v2.0_Chr6g0271991 Rosa chinensis HOM05D004664 ORTHO05D005526 6.9e-13 79.3 65 46.2
RcHm_v2.0_Chr6g0271891 Rosa chinensis HOM05D004664 ORTHO05D005526 7.6e-12 75.9 63 44.4
TPR.G28185 Trifolium pratense HOM05D000121 ORTHO05D000102 1.4e-10 71.6 90 51.1
Lsat_1_v5_gn_5_12680 Lactuca sativa HOM05D004664 ORTHO05D005526 2.4e-10 70.9 75 49.3
DCAR_028981 Daucus carota HOM05D004664 ORTHO05D005526 4.3e-07 60.1 110 33.6
BcaC02g09524 Brassica carinata HOM05D029228 ORTHO05D027443 4.8e-06 56.6 79 40.5
ECA237G0001 Erigeron canadensis HOM05D004664 ORTHO05D005526 4.8e-06 56.6 78 37.2
SHI14289 Sapria himalayana HOM05D004664 ORTHO05D005526 4.8e-06 56.6 100 35.0


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