Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb283330 Zea mays HOM05D001670 ORTHO05D002980 7.0e-66 253.8 130 100.0
Zm00001eb000340 Zea mays HOM05D001670 ORTHO05D002980 4.2e-55 218.0 126 91.3
Zm00001eb177620 Zea mays HOM05D001670 ORTHO05D002980 6.1e-54 214.2 126 89.7
Zm00001eb235140 Zea mays HOM05D001670 ORTHO05D002980 8.0e-54 213.8 126 90.5
Zm00001eb131810 Zea mays HOM05D001670 ORTHO05D002980 5.7e-52 207.6 108 99.1
Zm00001eb106330 Zea mays HOM05D001670 ORTHO05D002980 9.2e-50 200.3 105 98.1
Zm00001eb118550 Zea mays HOM05D001670 ORTHO05D002980 2.7e-49 198.7 105 98.1
Zm00001eb404410 Zea mays HOM05D001670 ORTHO05D002980 1.3e-48 196.4 126 83.3
Os10g0556700 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D002980 1.6e-33 146.4 128 65.6
Zm00001eb387210 Zea mays HOM05D001670 ORTHO05D444317 1.5e-28 129.8 72 93.1
Os03g0102333 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D002980 4.4e-28 128.3 116 62.1
Zm00001eb093240 Zea mays HOM05D013194 ORTHO05D015061 2.1e-17 92.8 45 97.8
Zm00001eb202170 Zea mays HOM05D004181 ORTHO05D005610 2.1e-17 92.8 45 97.8
Zm00001eb216850 Zea mays HOM05D013194 ORTHO05D015061 2.1e-17 92.8 45 97.8
Zm00001eb237010 Zea mays HOM05D001670 ORTHO05D005610 2.1e-17 92.8 45 97.8
HPP92_007431 Vanilla planifolia HOM05D001670 ORTHO05D002980 5.1e-16 88.2 128 39.1
Zm00001eb382550 Zea mays HOM05D001670 ORTHO05D002980 2.8e-14 82.4 54 77.8
TWI14G1227 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 3.8e-11 72.0 125 36.8
Manes.05G050200 Manihot esculenta HOM05D001670 ORTHO05D002980 4.9e-11 71.6 113 38.9
CANSAT21G0618 Cannabis sativa HOM05D001670 ORTHO05D002980 6.4e-11 71.2 122 34.4
Nitab4.5_0002304g0030 Nicotiana tabacum HOM05D001670 ORTHO05D002980 6.4e-11 71.2 122 36.1
Thecc.01G385600 Theobroma cacao HOM05D001670 ORTHO05D002980 6.4e-11 71.2 113 39.8
Nn6g33938 Nelumbo nucifera HOM05D001670 ORTHO05D002980 1.1e-10 70.5 129 36.4
Nitab4.5_0000706g0120 Nicotiana tabacum HOM05D001670 ORTHO05D002980 1.4e-10 70.1 122 36.9
ATR0317G075 Amborella trichopoda HOM05D001670 ORTHO05D002980 2.4e-10 69.3 129 37.2
CAN.G899.12 Capsicum annuum HOM05D001670 ORTHO05D002980 3.2e-10 68.9 109 39.4
MELO3C005963.2 Cucumis melo HOM05D001670 ORTHO05D002980 3.2e-10 68.9 125 36.0
Sopen01g036510 Solanum pennellii HOM05D001670 ORTHO05D002980 3.2e-10 68.9 109 39.4
Solyc01g090780.3 Solanum lycopersicum HOM05D001670 ORTHO05D002980 4.2e-10 68.6 109 39.4
CiPaw.13G031300 Carya illinoinensis HOM05D001670 ORTHO05D002980 5.4e-10 68.2 122 34.4
Gohir.A11G078000 Gossypium hirsutum HOM05D001670 ORTHO05D002980 5.4e-10 68.2 113 38.1
Gohir.D12G098300 Gossypium hirsutum HOM05D001670 ORTHO05D002980 5.4e-10 68.2 113 38.9
Gorai.008G107100 Gossypium raimondii HOM05D001670 ORTHO05D002980 5.4e-10 68.2 113 38.9
CsaV3_3G007410 Cucumis sativus L. HOM05D001670 ORTHO05D002980 9.3e-10 67.4 125 35.2
Duzib133G0195 Durio zibethinus HOM05D001670 ORTHO05D002980 9.3e-10 67.4 113 38.1
Ciclev10018430m.g Citrus clementina HOM05D001670 ORTHO05D002980 1.2e-09 67.0 110 38.2
Gohir.A12G095700 Gossypium hirsutum HOM05D001670 ORTHO05D002980 1.2e-09 67.0 113 38.1
Lalb_Chr07g0195691 Lupinus albus HOM05D001670 ORTHO05D002980 1.2e-09 67.0 125 32.0
TWI59G0301 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 1.2e-09 67.0 113 38.1
Cfa011137 Carpinus fangiana HOM05D001670 ORTHO05D002980 1.6e-09 66.6 125 34.4
CiPaw.14G024400 Carya illinoinensis HOM05D001670 ORTHO05D002980 1.6e-09 66.6 130 33.8
Gohir.D11G082400 Gossypium hirsutum HOM05D001670 ORTHO05D002980 1.6e-09 66.6 113 37.2
Gorai.007G088100 Gossypium raimondii HOM05D001670 ORTHO05D002980 1.6e-09 66.6 113 37.2
Lalb_Chr13g0290371 Lupinus albus HOM05D001670 ORTHO05D002980 3.5e-09 65.5 122 31.1
GSVIVG01018178001 Vitis vinifera HOM05D001670 ORTHO05D002980 3.5e-09 65.5 113 36.3
AT1G02080 Arabidopsis thaliana HOM05D001670 ORTHO05D002980 6.0e-09 64.7 98 38.8
Carub.0001s0015 Capsella rubella HOM05D001670 ORTHO05D002980 6.0e-09 64.7 113 37.2
Prupe.2G135900 Prunus persica HOM05D001670 ORTHO05D002980 6.0e-09 64.7 124 34.7
ClCG05G000260 Citrullus lanatus HOM05D001670 ORTHO05D002980 7.8e-09 64.3 130 34.6
Atru.chr5.219 Acer truncatum HOM05D001670 ORTHO05D002980 1.0e-08 63.9 113 37.2
Psat4g209400 Pisum sativum HOM05D001670 ORTHO05D002980 1.0e-08 63.9 122 32.0
TAR375G0686 Trochodendron aralioides HOM05D001670 ORTHO05D002980 1.0e-08 63.9 129 33.3
VMungo0331G0876 Vigna mungo HOM05D001670 ORTHO05D002980 1.0e-08 63.9 125 32.0
BcaC07g42342 Brassica carinata HOM05D001670 ORTHO05D002980 1.3e-08 63.5 117 35.0
Haze_02722 Corylus avellana HOM05D001670 ORTHO05D002980 1.3e-08 63.5 130 33.8
Oeu000038.3 Olea europaea HOM05D001670 ORTHO05D002980 1.3e-08 63.5 108 33.3
Peaxi162Scf00377g00038 Petunia axillaris HOM05D001670 ORTHO05D002980 1.3e-08 63.5 106 36.8
AL1G10200 Arabidopsis lyrata HOM05D001670 ORTHO05D002980 2.3e-08 62.8 99 40.4
Sp1g00220 Schrenkiella parvula HOM05D001670 ORTHO05D002980 2.3e-08 62.8 98 38.8
Sed0002470 Sechium edule HOM05D001670 ORTHO05D002980 2.3e-08 62.8 130 32.3
MD02G1214300 Malus domestica HOM05D001670 ORTHO05D002980 3.0e-08 62.4 118 33.9
BcaB03g13629 Brassica carinata HOM05D001670 ORTHO05D002980 5.1e-08 61.6 98 37.8
MBI04_g09509_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D002980 5.1e-08 61.6 130 33.1
Oeu064574.1 Olea europaea HOM05D001670 ORTHO05D002980 5.1e-08 61.6 121 29.8
Lj9C563G7 Lonicera japonica HOM05D001670 ORTHO05D002980 1.1e-07 60.5 128 33.6
CARHR000250 Cardamine hirsuta HOM05D001670 ORTHO05D002980 1.5e-07 60.1 117 35.0
Duzib268G0141 Durio zibethinus HOM05D001670 ORTHO05D002980 1.5e-07 60.1 113 35.4
COL.COLO4_12469 Corchorus olitorius HOM05D001670 ORTHO05D002980 1.9e-07 59.7 113 35.4
Mapoly0037s0011 Marchantia polymorpha HOM05D001670 ORTHO05D002980 1.9e-07 59.7 131 35.1
Lsat_1_v5_gn_7_10221 Lactuca sativa HOM05D001670 ORTHO05D002980 3.3e-07 58.9 122 32.0
Dinv44111 Davidia involucrata HOM05D001670 ORTHO05D002980 4.3e-07 58.5 110 33.6
QL04p035871 Quercus lobata HOM05D001670 ORTHO05D002980 4.3e-07 58.5 125 33.6
Sc13g0006690 Simmondsia chinensis HOM05D001670 ORTHO05D002980 4.3e-07 58.5 110 32.7
BraA09t42277Z Brassica rapa HOM05D001670 ORTHO05D002980 5.6e-07 58.2 97 36.1
Cc02_g24610 Coffea canephora HOM05D001670 ORTHO05D002980 5.6e-07 58.2 111 35.1
BcaC08g44594 Brassica carinata HOM05D001670 ORTHO05D002980 7.3e-07 57.8 96 36.5
Manes.01G270100 Manihot esculenta HOM05D001670 ORTHO05D002980 7.3e-07 57.8 115 35.7
THA.LOC104814077 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 7.3e-07 57.8 98 35.7
Cpa.g.sc914.1 Carica papaya HOM05D001670 ORTHO05D002980 9.6e-07 57.4 115 36.5
PGR042G0136 Punica granatum HOM05D001670 ORTHO05D002980 9.6e-07 57.4 110 34.5
Thhalv10006521m.g Eutrema salsugineum HOM05D001670 ORTHO05D002980 1.3e-06 57.0 98 36.7
Medtr8g005820 Medicago truncatula HOM05D001670 ORTHO05D002980 2.1e-06 56.2 127 30.7
Ah.05g173600 Amaranthus hybridus HOM05D001670 ORTHO05D002980 2.8e-06 55.8 93 37.6
Actinidia00124 Actinidia chinensis HOM05D001670 ORTHO05D010670 4.8e-06 55.1 110 30.9
Hund27384 Selenicereus undatus HOM05D001670 ORTHO05D002980 4.8e-06 55.1 114 33.3
Aa31LG1G11410 Aethionema arabicum HOM05D001670 ORTHO05D002980 6.2e-06 54.7 98 34.7
Rhsim01G0135600 Rhododendron simsii HOM05D001670 ORTHO05D002980 6.2e-06 54.7 110 36.4
vmacro21039 Vaccinium macrocarpon HOM05D001670 ORTHO05D002980 6.2e-06 54.7 106 34.9
Zm00001eb134450 Zea mays HOM05D001670 ORTHO05D010670 6.2e-06 54.7 26 100.0
THA.LOC104801485 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 8.1e-06 54.3 97 38.1


User provided reference genes

Program Settings