Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb234150 Zea mays HOM05D006873 ORTHO05D008668 7.2e-139 497.3 257 100.0
Os02g0326200 Oryza sativa ssp. japonica HOM05D006873 ORTHO05D008668 7.6e-64 248.1 259 58.3
THA.LOC104823082 Tarenaya hassleriana HOM05D006873 ORTHO05D008668 1.5e-35 154.1 226 41.2
Nn3g16974 Nelumbo nucifera HOM05D006873 ORTHO05D008668 5.7e-35 152.1 213 43.7
QL03p062447 Quercus lobata HOM05D006873 ORTHO05D008668 1.3e-34 151.0 156 52.6
Cfa009104 Carpinus fangiana HOM05D006873 ORTHO05D008668 1.6e-34 150.6 159 52.2
Prupe.1G259500 Prunus persica HOM05D006873 ORTHO05D008668 3.7e-34 149.4 157 51.6
Haze_12141 Corylus avellana HOM05D006873 ORTHO05D008668 4.8e-34 149.1 155 51.6
ATR1149G030 Amborella trichopoda HOM05D006873 ORTHO05D008668 8.2e-34 148.3 153 52.9
CiPaw.06G074700 Carya illinoinensis HOM05D006873 ORTHO05D008668 4.1e-33 146.0 155 51.6
PSO832G2329 Papaver somniferum HOM05D006873 ORTHO05D008668 5.3e-33 145.6 161 47.2
FAN17G1454 Fragaria x ananassa HOM05D006873 ORTHO05D008668 6.9e-33 145.2 161 47.8
MD16G1087500 Malus domestica HOM05D006873 ORTHO05D008668 6.9e-33 145.2 149 52.3
Atru.chr11.1966 Acer truncatum HOM05D006873 ORTHO05D008668 1.2e-32 144.4 233 42.5
Lalb_Chr05g0217211 Lupinus albus HOM05D006873 ORTHO05D008668 1.2e-32 144.4 151 49.0
Ciclev10031560m.g Citrus clementina HOM05D006873 ORTHO05D008668 1.5e-32 144.1 157 45.9
Aqoxy3G03077 Aquilegia oxysepala HOM05D006873 ORTHO05D008668 2.0e-32 143.7 167 47.9
arahy.Tifrunner.gnm1.ann1.MXA56B Arachis hypogaea HOM05D006873 ORTHO05D008668 2.0e-32 143.7 161 48.4
TAR622G0254 Trochodendron aralioides HOM05D006873 ORTHO05D008668 2.0e-32 143.7 155 48.4
HPP92_005898 Vanilla planifolia HOM05D006873 ORTHO05D008668 2.0e-32 143.7 184 44.0
arahy.Tifrunner.gnm1.ann1.8WMT1Z Arachis hypogaea HOM05D006873 ORTHO05D008668 2.6e-32 143.3 158 48.7
PSO063G4822 Papaver somniferum HOM05D006873 ORTHO05D008668 3.4e-32 142.9 213 41.8
Glyma.01G035700 Glycine max HOM05D006873 ORTHO05D008668 4.5e-32 142.5 153 49.0
FAN07G2203 Fragaria x ananassa HOM05D006873 ORTHO05D008668 5.9e-32 142.1 192 42.7
RcHm_v2.0_Chr4g0444501 Rosa chinensis HOM05D006873 ORTHO05D008668 5.9e-32 142.1 197 43.7
CSS0006883 Camellia sinensis var. sinensis HOM05D006873 ORTHO05D008668 1.0e-31 141.4 152 50.7
arahy.Tifrunner.gnm1.ann1.RPT3RX Arachis hypogaea HOM05D006873 ORTHO05D009096 1.3e-31 141.0 164 46.3
Manes.05G090700 Manihot esculenta HOM05D006873 ORTHO05D008668 1.3e-31 141.0 157 47.1
CSS0023446 Camellia sinensis var. sinensis HOM05D006873 ORTHO05D008668 2.2e-31 140.2 159 47.8
Glyma.02G030100 Glycine max HOM05D006873 ORTHO05D008668 2.2e-31 140.2 153 48.4
Actinidia15007 Actinidia chinensis HOM05D006873 ORTHO05D008668 2.9e-31 139.8 158 48.1
FAN22G1812 Fragaria x ananassa HOM05D006873 ORTHO05D008668 2.9e-31 139.8 191 43.5
PGR119G2095 Punica granatum HOM05D006873 ORTHO05D008668 2.9e-31 139.8 197 41.6
Gohir.D08G144400 Gossypium hirsutum HOM05D006873 ORTHO05D008668 3.8e-31 139.4 206 44.7
ClCG09G020710 Citrullus lanatus HOM05D006873 ORTHO05D008668 5.0e-31 139.0 158 45.6
MELO3C002912.2 Cucumis melo HOM05D006873 ORTHO05D008668 5.0e-31 139.0 158 46.2
Gorai.004G149100 Gossypium raimondii HOM05D006873 ORTHO05D008668 5.0e-31 139.0 206 42.7
Potri.008G146700 Populus trichocarpa HOM05D006873 ORTHO05D008668 6.5e-31 138.7 228 41.7
CANSAT01G2194 Cannabis sativa HOM05D006873 ORTHO05D008668 1.4e-30 137.5 160 46.2
Lj2g0015184 Lotus japonicus HOM05D006873 ORTHO05D008668 1.4e-30 137.5 153 46.4
Thecc.02G242900 Theobroma cacao HOM05D006873 ORTHO05D008668 1.4e-30 137.5 202 41.6
FvH4_4g34980 Fragaria vesca HOM05D006873 ORTHO05D008668 1.9e-30 137.1 194 42.3
TWI18G0196 Tripterygium wilfordii HOM05D006873 ORTHO05D008668 3.2e-30 136.3 206 40.3
arahy.Tifrunner.gnm1.ann1.N2BTYN Arachis hypogaea HOM05D006873 ORTHO05D008668 5.5e-30 135.6 173 45.1
COL.COLO4_37899 Corchorus olitorius HOM05D006873 ORTHO05D008668 5.5e-30 135.6 197 38.6
Gohir.A08G123000 Gossypium hirsutum HOM05D006873 ORTHO05D008668 5.5e-30 135.6 240 38.8
Hund25317 Selenicereus undatus HOM05D006873 ORTHO05D008668 5.5e-30 135.6 181 39.2
VMungo1215G0960 Vigna mungo HOM05D006873 ORTHO05D008668 1.2e-29 134.4 155 44.5
Cpa.g.sc5.353 Carica papaya HOM05D006873 ORTHO05D008668 1.6e-29 134.0 160 44.4
Phvul.002G074900 Phaseolus vulgaris HOM05D006873 ORTHO05D008668 1.6e-29 134.0 197 40.6
SEGI_33585 Sequoiadendron giganteum HOM05D006873 ORTHO05D008668 2.1e-29 133.7 155 45.8
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 2.7e-29 133.3 149 46.3
HanXRQChr08g0209031 Helianthus annuus HOM05D006873 ORTHO05D008668 2.7e-29 133.3 157 44.6
Migut.L01442 Erythranthe guttata HOM05D006873 ORTHO05D008668 3.6e-29 132.9 152 44.7
GSVIVG01020168001 Vitis vinifera HOM05D006873 ORTHO05D008668 3.6e-29 132.9 244 37.3
Ca_04627_v3 Cicer arietinum L. HOM05D006873 ORTHO05D008668 4.6e-29 132.5 153 45.8
unitig_26.g10334 Utricularia gibba HOM05D006873 ORTHO05D008668 4.6e-29 132.5 158 44.3
Sc11g0001350 Simmondsia chinensis HOM05D006873 ORTHO05D008668 6.1e-29 132.1 153 43.1
MBI15_g12637_MAGBIO Magnolia biondii HOM05D006873 ORTHO05D008668 1.0e-28 131.3 98 63.3
TPR.G13500 Trifolium pratense HOM05D006873 ORTHO05D008668 1.3e-28 131.0 160 44.4
Thhalv10018395m.g Eutrema salsugineum HOM05D006873 ORTHO05D008668 1.8e-28 130.6 156 44.9
Aa31LG4G10700 Aethionema arabicum HOM05D006873 ORTHO05D008668 2.3e-28 130.2 165 42.4
Medtr5g035330 Medicago truncatula HOM05D006873 ORTHO05D008668 2.3e-28 130.2 149 45.6
MSTRG.7876 Avicennia marina HOM05D006873 ORTHO05D008668 3.0e-28 129.8 210 34.3
DCAR_026551 Daucus carota HOM05D006873 ORTHO05D008668 3.0e-28 129.8 162 43.2
Cc11_g14280 Coffea canephora HOM05D006873 ORTHO05D008668 6.7e-28 128.6 150 44.0
Duzib248G0774 Durio zibethinus HOM05D006873 ORTHO05D008668 6.7e-28 128.6 259 38.6
Lsat_1_v5_gn_8_160241 Lactuca sativa HOM05D006873 ORTHO05D008668 6.7e-28 128.6 182 40.7
Sed0022830 Sechium edule HOM05D006873 ORTHO05D008668 6.7e-28 128.6 224 38.8
AUR62020959 Chenopodium quinoa HOM05D006873 ORTHO05D008668 8.7e-28 128.3 150 42.0
Sabra08G0111700 Salix brachista HOM05D006873 ORTHO05D008668 8.7e-28 128.3 212 42.0
CDE07G1306 Ceratophyllum demersum HOM05D005206 ORTHO05D006219 1.1e-27 127.9 159 44.0
Sp5g25330 Schrenkiella parvula HOM05D006873 ORTHO05D008668 1.1e-27 127.9 186 42.5
BcaB03g15534 Brassica carinata HOM05D006873 ORTHO05D008668 1.5e-27 127.5 158 44.3
CARHR063320 Cardamine hirsuta HOM05D006873 ORTHO05D008668 1.5e-27 127.5 164 43.3
PGSC0003DMG400015575 Solanum tuberosum HOM05D006873 ORTHO05D008668 2.5e-27 126.7 195 39.0
A07p31180 Brassica napus HOM05D006873 ORTHO05D008668 3.3e-27 126.3 155 43.9
BraA07t30751Z Brassica rapa HOM05D006873 ORTHO05D008668 3.3e-27 126.3 155 43.9
Solyc05g006070.4 Solanum lycopersicum HOM05D006873 ORTHO05D008668 3.3e-27 126.3 152 43.4
Sopen05g002090 Solanum pennellii HOM05D006873 ORTHO05D008668 3.3e-27 126.3 152 43.4
SGA_v2.0_scaffold166G38344 Striga asiatica HOM05D006873 ORTHO05D008668 3.3e-27 126.3 198 35.9
vmacro16278 Vaccinium macrocarpon HOM05D006873 ORTHO05D008668 4.3e-27 125.9 186 38.7
BolC6t38744H Brassica oleracea HOM05D006873 ORTHO05D008668 5.7e-27 125.6 155 44.5
BcaC08g45836 Brassica carinata HOM05D006873 ORTHO05D008668 7.4e-27 125.2 155 43.9
AL2G29500 Arabidopsis lyrata HOM05D006873 ORTHO05D008668 9.7e-27 124.8 195 40.5
C06p36230 Brassica napus HOM05D006873 ORTHO05D008668 9.7e-27 124.8 155 43.9
Eucgr.B02558 Eucalyptus grandis HOM05D006873 ORTHO05D008668 1.6e-26 124.0 169 40.8
Rhsim12G0124200 Rhododendron simsii HOM05D006873 ORTHO05D008668 1.6e-26 124.0 193 38.9
Nitab4.5_0000257g0240 Nicotiana tabacum HOM05D006873 ORTHO05D008668 2.2e-26 123.6 145 44.8
SalBow2G2215 Salvia bowleyana HOM05D006873 ORTHO05D008668 2.2e-26 123.6 189 37.0
SalBow2G2439 Salvia bowleyana HOM05D006873 ORTHO05D008668 2.2e-26 123.6 189 37.0
Nitab4.5_0009368g0020 Nicotiana tabacum HOM05D006873 ORTHO05D008668 2.8e-26 123.2 145 44.8
EL10Ac6g13256 Beta vulgaris HOM05D006873 ORTHO05D008668 3.7e-26 122.9 151 41.7
AT1G70200 Arabidopsis thaliana HOM05D006873 ORTHO05D008668 6.3e-26 122.1 157 42.0
Carub.0002s1690 Capsella rubella HOM05D006873 ORTHO05D008668 1.8e-25 120.6 154 42.2
Oeu001659.1 Olea europaea HOM05D006873 ORTHO05D008668 6.9e-25 118.6 90 61.1
Peaxi162Scf00421g00062 Petunia axillaris HOM05D006873 ORTHO05D008668 1.2e-24 117.9 142 43.7
Mapoly0001s0497 Marchantia polymorpha HOM05D006873 ORTHO05D008668 5.9e-24 115.5 239 34.7
CsaV3_5G025700 Cucumis sativus L. HOM05D006873 ORTHO05D008668 5.5e-22 109.0 102 48.0
Psat2g111440 Pisum sativum HOM05D006873 ORTHO05D008668 5.5e-22 109.0 130 44.6
AagrBONN_evm.TU.Sc2ySwM_362.2365 Anthoceros agrestis HOM05D006873 ORTHO05D008668 2.1e-21 107.1 147 40.8
SMO146G0062 Selaginella moellendorffii HOM05D006873 ORTHO05D008668 2.1e-21 107.1 162 37.7
Ah.04g149970 Amaranthus hybridus HOM05D006873 ORTHO05D008668 4.6e-21 105.9 155 36.1
Pp3c1_41900 Physcomitrium patens HOM05D006873 ORTHO05D008668 6.1e-21 105.5 186 36.0
CDE04G1917 Ceratophyllum demersum HOM05D000231 ORTHO05D008668 3.0e-20 103.2 91 52.7
CBR_g81555 Chara braunii HOM05D006873 ORTHO05D000353 3.0e-20 103.2 201 35.3
AUR62018459 Chenopodium quinoa HOM05D000676 ORTHO05D001458 2.2e-15 87.0 83 48.2
Duzib251G0321 Durio zibethinus HOM05D006873 ORTHO05D008668 8.5e-15 85.1 165 34.5
Dinv31000 Davidia involucrata HOM05D006873 ORTHO05D008668 3.6e-13 79.7 148 33.8
Dinv31103 Davidia involucrata HOM05D006873 ORTHO05D008668 3.6e-13 79.7 148 33.8


User provided reference genes

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