Gene: Pp3c1_41900

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c1_41900
  • Transcript Identifier Pp3c1_41900V3.1
  • Gene Type Coding gene
  • Location Chr01 : 29338578-29341174 : positive

Gene Family Information

  • ID HOM05D006873
  • #Genes/#Species 117/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c1_41900V3.1
  • pacid 32971253
  • alias Phpat.001G166100
  • alias Phypa_233958
  • alias Pp1s111_146V6
  • uniprot A0A2K1LBV4

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT1G70200
GO:0006364
ISO
PLAZA Integrative OrthologyrRNA processing AT1G70200
GO:0032544
ISO
PLAZA Integrative Orthologyplastid translation AT1G70200

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0019843
ISO
PLAZA Integrative OrthologyrRNA binding AT1G70200

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G70200
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT1G70200

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
Mapman id Description
16.11.4.1.6 RNA processing.organelle machinery.pre-mRNA splicing.plastidial RNA splicing.splicing factor (HPE1)