Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1127G0135 Vigna mungo HOM05D003241 ORTHO05D003812 9.4e-298 1026.2 544 100.0
Phvul.011G184800 Phaseolus vulgaris HOM05D003241 ORTHO05D003812 8.3e-254 880.2 504 93.3
Glyma.08G229600 Glycine max HOM05D003241 ORTHO05D003812 6.8e-248 860.5 504 91.1
Glyma.07G220800 Glycine max HOM05D003241 ORTHO05D003812 1.1e-245 853.2 504 91.3
Ca_13374_v3 Cicer arietinum L. HOM05D003241 ORTHO05D003812 1.5e-234 816.2 505 85.9
Lalb_Chr03g0032261 Lupinus albus HOM05D003241 ORTHO05D003812 1.9e-229 799.3 506 84.2
Lalb_Chr19g0130441 Lupinus albus HOM05D003241 ORTHO05D003812 3.2e-229 798.5 506 84.0
Psat0s3089g0040 Pisum sativum HOM05D003241 ORTHO05D003812 5.1e-227 791.2 513 82.8
Medtr1g083910 Medicago truncatula HOM05D003241 ORTHO05D003812 9.9e-223 776.9 505 82.2
arahy.Tifrunner.gnm1.ann1.2W1DSR Arachis hypogaea HOM05D003241 ORTHO05D003812 1.3e-222 776.5 512 81.8
Lj3g0022607 Lotus japonicus HOM05D003241 ORTHO05D003812 1.1e-221 773.5 506 81.6
arahy.Tifrunner.gnm1.ann1.61N80Q Arachis hypogaea HOM05D003241 ORTHO05D003812 9.6e-218 760.4 530 78.7
TPR.G2613 Trifolium pratense HOM05D003241 ORTHO05D003812 6.9e-216 754.2 550 76.2
QL06p002393 Quercus lobata HOM05D003241 ORTHO05D003812 2.0e-194 682.9 518 71.8
QL06p002249 Quercus lobata HOM05D003241 ORTHO05D003812 7.4e-194 681.0 518 71.6
Atru.chr4.2711 Acer truncatum HOM05D003241 ORTHO05D003812 5.5e-189 664.8 526 70.0
Gohir.A04G045600 Gossypium hirsutum HOM05D003241 ORTHO05D003812 7.2e-189 664.5 517 72.0
Haze_00894 Corylus avellana HOM05D003241 ORTHO05D003812 1.2e-188 663.7 518 71.8
Gohir.D05G337200 Gossypium hirsutum HOM05D003241 ORTHO05D003812 6.1e-188 661.4 516 71.1
Gorai.009G361400 Gossypium raimondii HOM05D003241 ORTHO05D003812 3.9e-187 658.7 516 70.9
CiPaw.02G097400 Carya illinoinensis HOM05D003241 ORTHO05D003812 5.7e-186 654.8 519 69.9
QL11p041824 Quercus lobata HOM05D003241 ORTHO05D003812 7.4e-186 654.4 515 69.1
Manes.16G074400 Manihot esculenta HOM05D003241 ORTHO05D003812 9.7e-186 654.1 516 71.1
Duzib213G0093 Durio zibethinus HOM05D003241 ORTHO05D003812 4.8e-185 651.7 516 70.2
Dinv19008 Davidia involucrata HOM05D003241 ORTHO05D003812 1.1e-184 650.6 512 70.5
Dinv09319 Davidia involucrata HOM05D003241 ORTHO05D003812 1.4e-184 650.2 512 70.5
TAR625G1302 Trochodendron aralioides HOM05D003241 ORTHO05D003812 4.1e-184 648.7 512 69.7
Nn5g27739 Nelumbo nucifera HOM05D003241 ORTHO05D003812 2.2e-182 642.9 512 68.6
Medtr1g032020 Medicago truncatula HOM05D003241 ORTHO05D003812 1.1e-181 640.6 512 70.9
Medtr1g032350 Medicago truncatula HOM05D003241 ORTHO05D003812 1.1e-181 640.6 512 70.9
Thecc.07G135300 Theobroma cacao HOM05D003241 ORTHO05D003812 6.1e-180 634.8 516 69.0
TAR571G0002 Trochodendron aralioides HOM05D003241 ORTHO05D003812 8.0e-180 634.4 512 68.2
TWI32G0731 Tripterygium wilfordii HOM05D003241 ORTHO05D003812 1.0e-179 634.0 513 68.4
TAR381G1550 Trochodendron aralioides HOM05D003241 ORTHO05D003812 1.8e-179 633.3 512 68.2
GSVIVG01035173001 Vitis vinifera HOM05D003241 ORTHO05D003812 1.8e-179 633.3 513 67.4
MD13G1193700 Malus domestica HOM05D003241 ORTHO05D003812 7.4e-178 627.9 546 65.4
Eucgr.J03092 Eucalyptus grandis HOM05D003241 ORTHO05D003812 1.8e-176 623.2 516 67.8
Cfa015650 Carpinus fangiana HOM05D003241 ORTHO05D003812 1.3e-174 617.1 518 68.7
MD16G1194300 Malus domestica HOM05D003241 ORTHO05D003812 6.5e-174 614.8 546 64.7
vmacro13976 Vaccinium macrocarpon HOM05D003241 ORTHO05D003812 1.5e-173 613.6 553 62.9
Ciclev10000233m.g Citrus clementina HOM05D003241 ORTHO05D003812 1.8e-171 606.7 513 66.5
Cpa.g.sc115.47 Carica papaya HOM05D003241 ORTHO05D003812 4.1e-168 595.5 511 65.4
CSS0028609 Camellia sinensis var. sinensis HOM05D003241 ORTHO05D003812 5.3e-168 595.1 513 64.7
Actinidia29972 Actinidia chinensis HOM05D003241 ORTHO05D003812 1.2e-167 594.0 513 65.1
MELO3C022204.2 Cucumis melo HOM05D003241 ORTHO05D003812 2.0e-167 593.2 532 65.6
ECA248G0833 Erigeron canadensis HOM05D003241 ORTHO05D003812 1.3e-166 590.5 511 65.0
AL6G27800 Arabidopsis lyrata HOM05D003241 ORTHO05D003812 2.9e-166 589.3 514 64.2
Carub.0006s1500 Capsella rubella HOM05D003241 ORTHO05D003812 5.0e-166 588.6 512 64.3
Duzib268G1256 Durio zibethinus HOM05D003241 ORTHO05D003812 1.1e-165 587.4 516 65.5
Lj2A813G14 Lonicera japonica HOM05D003241 ORTHO05D003812 2.5e-165 586.3 489 66.9
SalBow3G1087 Salvia bowleyana HOM05D003241 ORTHO05D003812 1.2e-164 583.9 542 62.4
CsaV3_5G040300 Cucumis sativus L. HOM05D003241 ORTHO05D003812 4.7e-164 582.0 532 64.5
Potri.001G082100 Populus trichocarpa HOM05D003241 ORTHO05D003812 8.0e-164 581.3 515 65.6
AT5G16780 Arabidopsis thaliana HOM05D003241 ORTHO05D003812 1.0e-163 580.9 517 63.8
Sed0020388 Sechium edule HOM05D003241 ORTHO05D003812 4.0e-163 578.9 527 65.8
Nitab4.5_0004325g0020 Nicotiana tabacum HOM05D003241 ORTHO05D003812 8.8e-163 577.8 513 64.9
Peaxi162Scf00296g00721 Petunia axillaris HOM05D003241 ORTHO05D003812 1.2e-162 577.4 513 65.5
Nitab4.5_0004385g0020 Nicotiana tabacum HOM05D003241 ORTHO05D003812 2.6e-162 576.2 513 64.7
CAN.G321.38 Capsicum annuum HOM05D003241 ORTHO05D003812 2.8e-161 572.8 513 64.3
PSO339G1389 Papaver somniferum HOM05D003241 ORTHO05D003812 1.4e-160 570.5 514 63.6
PSO063G3239 Papaver somniferum HOM05D003241 ORTHO05D003812 3.1e-160 569.3 513 63.7
BolC9t58862H Brassica oleracea HOM05D003241 ORTHO05D003812 1.2e-159 567.4 510 63.3
C09p60290 Brassica napus HOM05D003241 ORTHO05D003812 2.0e-159 566.6 510 63.3
PSO013G0353 Papaver somniferum HOM05D003241 ORTHO05D003812 2.0e-159 566.6 513 63.5
Sopen11g004250 Solanum pennellii HOM05D003241 ORTHO05D003812 5.9e-159 565.1 513 63.2
PGSC0003DMG400007426 Solanum tuberosum HOM05D003241 ORTHO05D003812 1.0e-158 564.3 513 63.4
PSO339G6261 Papaver somniferum HOM05D003241 ORTHO05D003812 1.3e-158 563.9 513 63.2
A10p22440 Brassica napus HOM05D003241 ORTHO05D003812 3.8e-158 562.4 511 62.8
BraA10t44303Z Brassica rapa HOM05D003241 ORTHO05D003812 3.8e-158 562.4 511 62.8
Prupe.1G014100 Prunus persica HOM05D003241 ORTHO05D003812 3.3e-157 559.3 545 61.1
Thhalv10012684m.g Eutrema salsugineum HOM05D003241 ORTHO05D003812 9.5e-157 557.8 510 62.0
CARHR196380 Cardamine hirsuta HOM05D003241 ORTHO05D003812 8.0e-156 554.7 516 62.8
Aqoxy4G03221 Aquilegia oxysepala HOM05D003241 ORTHO05D003812 1.5e-154 550.4 513 62.6
COL.COLO4_17461 Corchorus olitorius HOM05D003241 ORTHO05D003812 2.0e-154 550.1 518 62.0
PGR031G3475 Punica granatum HOM05D003241 ORTHO05D003812 3.4e-154 549.3 534 60.5
Eucgr.L01432 Eucalyptus grandis HOM05D003241 ORTHO05D003812 9.8e-154 547.7 514 62.6
Oeu011820.1 Olea europaea HOM05D003241 ORTHO05D003812 1.3e-153 547.4 507 62.1
Oeu058578.1 Olea europaea HOM05D003241 ORTHO05D003812 1.3e-153 547.4 514 62.3
AUR62034840 Chenopodium quinoa HOM05D003241 ORTHO05D003812 1.7e-153 547.0 526 59.5
Actinidia38515 Actinidia chinensis HOM05D003241 ORTHO05D003812 2.2e-153 546.6 451 66.3
FAN27G2894 Fragaria x ananassa HOM05D003241 ORTHO05D003812 2.7e-151 539.7 542 59.2
Aa31LG11G12850 Aethionema arabicum HOM05D003241 ORTHO05D003812 6.6e-150 535.0 511 59.7
RcHm_v2.0_Chr4g0416161 Rosa chinensis HOM05D003241 ORTHO05D003812 9.5e-149 531.2 555 58.0
Lsat_1_v5_gn_1_54260 Lactuca sativa HOM05D003241 ORTHO05D003812 1.6e-148 530.4 514 60.1
FvH4_4g15641 Fragaria vesca HOM05D003241 ORTHO05D003812 1.4e-147 527.3 542 58.3
FAN12G3728 Fragaria x ananassa HOM05D003241 ORTHO05D003812 1.4e-147 527.3 542 58.3
CDE06G2045 Ceratophyllum demersum HOM05D003241 ORTHO05D003812 3.1e-147 526.2 519 59.2
MBI18_g28212_MAGBIO Magnolia biondii HOM05D003241 ORTHO05D003812 6.8e-147 525.0 512 59.2
RcHm_v2.0_Chr4g0416151 Rosa chinensis HOM05D003241 ORTHO05D003812 1.2e-146 524.2 542 57.9
Migut.J00827 Erythranthe guttata HOM05D003241 ORTHO05D003812 2.2e-145 520.0 512 59.0
ECA248G0244 Erigeron canadensis HOM05D003241 ORTHO05D003812 6.4e-145 518.5 504 60.3
FAN15G1779 Fragaria x ananassa HOM05D003241 ORTHO05D003812 6.4e-145 518.5 541 57.1
QL09p049197 Quercus lobata HOM05D003241 ORTHO05D003812 1.1e-144 517.7 564 55.9
EL10Ac6g15598 Beta vulgaris HOM05D003241 ORTHO05D003812 1.9e-144 516.9 527 58.8
FAN20G2531 Fragaria x ananassa HOM05D003241 ORTHO05D003812 7.0e-144 515.0 543 56.9
HPP92_003413 Vanilla planifolia HOM05D003241 ORTHO05D008621 2.0e-143 513.5 515 58.4
AUR62018246 Chenopodium quinoa HOM05D003241 ORTHO05D003812 4.6e-143 512.3 526 56.8
DCAR_019828 Daucus carota HOM05D003241 ORTHO05D003812 6.0e-143 511.9 514 59.3
SGA_v2.0_scaffold31G12724 Striga asiatica HOM05D003241 ORTHO05D003812 1.0e-142 511.1 515 57.1
Sp6g27340 Schrenkiella parvula HOM05D003241 ORTHO05D003812 3.9e-142 509.2 479 60.1
Glyma.15G216300 Glycine max HOM05D003241 ORTHO05D003812 2.3e-139 500.0 303 89.4
HanXRQChr09g0244631 Helianthus annuus HOM05D003241 ORTHO05D003812 3.4e-138 496.1 514 57.6
FAN17G1371 Fragaria x ananassa HOM05D003241 ORTHO05D003812 4.4e-138 495.7 540 56.7
ATR1098G045 Amborella trichopoda HOM05D003241 ORTHO05D003812 2.8e-132 476.5 513 55.0
Lj2C819G2 Lonicera japonica HOM05D003241 ORTHO05D003812 6.2e-132 475.3 512 56.6
Hund17599 Selenicereus undatus HOM05D003241 ORTHO05D003812 4.9e-129 465.7 513 55.2
SEGI_01763 Sequoiadendron giganteum HOM05D003241 ORTHO05D003812 4.9e-129 465.7 522 53.1
FAN22G0104 Fragaria x ananassa HOM05D003241 ORTHO05D003812 5.6e-125 452.2 467 58.0
unitig_77.g31483 Utricularia gibba HOM05D003241 ORTHO05D003812 2.9e-121 439.9 544 51.3
Sc22g0003580 Simmondsia chinensis HOM05D003241 ORTHO05D003812 7.1e-120 435.3 384 63.5
Zm00001eb140630 Zea mays HOM05D003241 ORTHO05D003812 4.3e-117 426.0 525 51.0
CDE03G0251 Ceratophyllum demersum HOM05D003241 ORTHO05D003812 8.1e-116 421.8 443 56.2
Rhsim01G0112900 Rhododendron simsii HOM05D003241 ORTHO05D003812 3.0e-110 403.3 444 56.1
Solyc11g008470.2 Solanum lycopersicum HOM05D003241 ORTHO05D003812 8.7e-110 401.7 378 61.4
ClCG08G000520 Citrullus lanatus HOM05D003241 ORTHO05D003812 4.2e-104 382.9 386 60.4
TPR.G37958 Trifolium pratense HOM05D003241 ORTHO05D003812 2.3e-102 377.1 368 63.9
SalBow6G1729 Salvia bowleyana HOM05D003241 ORTHO05D003812 2.5e-96 357.1 368 58.2
SalBow6G5488 Salvia bowleyana HOM05D003241 ORTHO05D003812 2.5e-96 357.1 368 58.2
AagrBONN_evm.TU.Sc2ySwM_344.1153__1154 Anthoceros agrestis HOM05D003241 ORTHO05D003812 2.7e-95 353.6 526 45.2
unitig_749.g14191 Utricularia gibba HOM05D003241 ORTHO05D003812 1.5e-90 337.8 546 43.8
Mapoly0063s0006 Marchantia polymorpha HOM05D003241 ORTHO05D003812 2.0e-90 337.4 525 44.0
QL09p049206 Quercus lobata HOM05D003241 ORTHO05D003812 1.0e-89 335.1 220 77.7
Pp3c15_10170 Physcomitrium patens HOM05D003241 ORTHO05D003812 4.6e-87 326.2 520 42.9
Psat6g151960 Pisum sativum HOM05D003241 ORTHO05D003812 1.4e-80 304.7 244 71.7
BcaC04g18847 Brassica carinata HOM05D003241 ORTHO05D003812 1.6e-79 301.2 291 58.8
MBI14_g36867_MAGBIO Magnolia biondii HOM05D003241 ORTHO05D003812 7.9e-79 298.9 253 64.8
SMO361G0171 Selaginella moellendorffii HOM05D003241 ORTHO05D003812 1.5e-77 294.7 507 39.6
CBR_g32002 Chara braunii HOM05D003241 ORTHO05D003812 1.6e-71 274.6 557 39.0
Lj6g0011042 Lotus japonicus HOM05D003241 ORTHO05D003812 5.2e-62 243.0 206 66.0
Eucgr.G01007 Eucalyptus grandis HOM05D003241 ORTHO05D003812 3.4e-53 213.8 242 56.6
Os02g0511500 Oryza sativa ssp. japonica HOM05D003241 ORTHO05D003812 2.4e-51 207.6 233 52.8
SHI33105 Sapria himalayana HOM05D000743 ORTHO05D000580 1.6e-50 204.9 384 39.1
COL.COLO4_13873 Corchorus olitorius HOM05D003241 ORTHO05D003812 1.7e-49 201.4 486 37.0
vmacro00335 Vaccinium macrocarpon HOM05D003241 ORTHO05D003812 2.9e-49 200.7 515 32.6
BcaC04g18849 Brassica carinata HOM05D003241 ORTHO05D003812 1.2e-47 195.3 178 60.7
AagrBONN_evm.TU.Sc2ySwM_344.225 Anthoceros agrestis HOM05D003241 ORTHO05D003812 1.8e-43 181.4 317 42.9
Lj1A444T9 Lonicera japonica HOM05D003241 ORTHO05D003812 2.9e-41 174.1 381 36.2
QL09p049212 Quercus lobata HOM05D003241 ORTHO05D003812 2.9e-41 174.1 136 71.3
BcaC04g18848 Brassica carinata HOM05D003241 ORTHO05D003812 1.1e-40 172.2 146 64.4
Lju445A0T12 Lonicera japonica HOM05D003241 ORTHO05D003812 3.3e-40 170.6 387 35.7
Peaxi162Scf00067g00244 Petunia axillaris HOM05D003241 ORTHO05D003812 7.2e-40 169.5 210 51.0
Solyc11g008460.1 Solanum lycopersicum HOM05D003241 ORTHO05D003812 9.5e-40 169.1 136 68.4
AagrBONN_evm.TU.Sc2ySwM_117.3514 Anthoceros agrestis HOM05D003241 ORTHO05D003812 7.0e-35 152.9 458 31.4
ClCG08G000490 Citrullus lanatus HOM05D003241 ORTHO05D003812 7.8e-34 149.4 145 64.1
vmacro19775 Vaccinium macrocarpon HOM05D003241 ORTHO05D003812 4.7e-31 140.2 209 45.0
MCO08G320 Micromonas commoda HOM05D003241 ORTHO05D003812 2.9e-28 131.0 491 29.7
Hma1.2p1_0765F.1_g215090 Hydrangea macrophylla HOM05D003241 ORTHO05D003812 1.1e-27 129.0 158 49.4
Nitab4.5_0002344g0060 Nicotiana tabacum HOM05D003241 ORTHO05D003812 2.4e-27 127.9 229 45.0
QL04p053119 Quercus lobata HOM05D003241 ORTHO05D003812 2.4e-27 127.9 120 58.3
QL06p040345 Quercus lobata HOM05D003241 ORTHO05D003812 2.4e-27 127.9 120 58.3
vmacro19776 Vaccinium macrocarpon HOM05D003241 ORTHO05D003812 2.4e-27 127.9 182 46.7
Hma1.2p1_0358F.1_g134820 Hydrangea macrophylla HOM05D003241 ORTHO05D003812 1.6e-26 125.2 150 50.0
Hma1.2p1_0148F.1_g066050 Hydrangea macrophylla HOM05D003241 ORTHO05D003812 2.7e-26 124.4 178 47.8
Nitab4.5_0014335g0020 Nicotiana tabacum HOM05D003241 ORTHO05D003812 5.0e-25 120.2 226 42.9
PGSC0003DMG400024746 Solanum tuberosum HOM05D003241 ORTHO05D003812 2.8e-23 114.4 229 39.7
CARHR196420 Cardamine hirsuta HOM05D003241 ORTHO05D003812 6.2e-23 113.2 93 63.4
PRCOL_00003741 Prasinoderma coloniale HOM05D003241 ORTHO05D003812 1.1e-22 112.5 612 29.1
AagrBONN_evm.TU.Sc2ySwM_117.3043 Anthoceros agrestis HOM05D003241 ORTHO05D003812 4.0e-22 110.5 193 42.0
AagrBONN_evm.TU.Sc2ySwM_344.222 Anthoceros agrestis HOM05D003241 ORTHO05D003812 2.0e-21 108.2 256 37.9
Haze_07845 Corylus avellana HOM05D003241 ORTHO05D003812 2.0e-21 108.2 102 60.8
Sopen06g019980 Solanum pennellii HOM05D003241 ORTHO05D003812 9.8e-21 105.9 69 71.0
Cre03.g156100 Chlamydomonas reinhardtii HOM05D003241 ORTHO05D003812 3.5e-18 97.4 620 26.1
RcHm_v2.0_Chr1g0362541 Rosa chinensis HOM05D003241 ORTHO05D003812 3.9e-17 94.0 53 81.1
CAN.G1652.14 Capsicum annuum HOM05D003241 ORTHO05D003812 2.3e-14 84.7 147 42.2
Solyc01g099380.4 Solanum lycopersicum HOM05D003241 ORTHO05D003812 4.9e-12 77.0 105 51.4
Eucgr.K00104 Eucalyptus grandis HOM05D002350 ORTHO05D000091 8.4e-12 76.3 77 58.4
QL05p063869 Quercus lobata HOM05D003241 ORTHO05D003812 8.4e-12 76.3 130 43.1
Eucgr.L02270 Eucalyptus grandis HOM05D001083 ORTHO05D003812 1.9e-11 75.1 59 67.8
Sopen01g042940 Solanum pennellii HOM05D003241 ORTHO05D003812 1.9e-11 75.1 165 39.4
Migut.N01793 Erythranthe guttata HOM05D003241 ORTHO05D003812 2.1e-10 71.6 103 42.7
Potri.003G148501 Populus trichocarpa HOM05D003241 ORTHO05D003812 7.8e-10 69.7 99 49.5
SHI33107 Sapria himalayana HOM05D001560 ORTHO05D004675 3.9e-09 67.4 52 61.5
RcHm_v2.0_Chr7g0234901 Rosa chinensis HOM05D003241 ORTHO05D003812 1.5e-08 65.5 199 30.7
Actinidia21372 Actinidia chinensis HOM05D003241 ORTHO05D003812 9.6e-08 62.8 75 48.0
Aqoxy2G01894 Aquilegia oxysepala HOM05D000395 ORTHO05D000088 6.8e-06 56.6 70 52.9


User provided reference genes

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