Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.06G006500 Theobroma cacao HOM05D004270 ORTHO05D005037 3.2e-167 591.7 291 100.0
Duzib268G0296 Durio zibethinus HOM05D004270 ORTHO05D005037 9.9e-161 570.1 291 95.2
CiPaw.14G018200 Carya illinoinensis HOM05D004270 ORTHO05D005037 2.7e-158 562.0 291 92.4
Duzib187G1348 Durio zibethinus HOM05D004270 ORTHO05D005037 4.6e-158 561.2 291 94.8
Gohir.D08G090400 Gossypium hirsutum HOM05D004270 ORTHO05D005037 3.9e-157 558.1 288 94.1
Gorai.004G095400 Gossypium raimondii HOM05D004270 ORTHO05D005037 1.1e-156 556.6 288 94.1
Gohir.A08G080300 Gossypium hirsutum HOM05D004270 ORTHO05D005037 2.8e-155 552.0 288 93.4
Ca_08047_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 6.2e-155 550.8 291 89.7
Ca_08053_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 6.2e-155 550.8 291 89.7
Potri.005G199100 Populus trichocarpa HOM05D004270 ORTHO05D005037 6.2e-155 550.8 291 90.7
Ciclev10005458m.g Citrus clementina HOM05D004270 ORTHO05D005037 1.1e-154 550.1 291 90.0
Thhalv10008359m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 2.4e-154 548.9 290 91.7
Potri.002G061900 Populus trichocarpa HOM05D004270 ORTHO05D005037 2.4e-154 548.9 291 90.4
RcHm_v2.0_Chr5g0023881 Rosa chinensis HOM05D004270 ORTHO05D005037 4.0e-154 548.1 291 90.4
THA.LOC104812380 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 4.0e-154 548.1 288 90.3
FvH4_3g14500 Fragaria vesca HOM05D004270 ORTHO05D005037 8.9e-154 547.0 291 90.0
arahy.Tifrunner.gnm1.ann1.D5XWDC Arachis hypogaea HOM05D004270 ORTHO05D005037 2.0e-153 545.8 291 89.0
Lj1g0019682 Lotus japonicus HOM05D004270 ORTHO05D005037 2.0e-153 545.8 291 89.7
Sp5g34553 Schrenkiella parvula HOM05D004270 ORTHO05D005037 2.0e-153 545.8 291 90.7
CARHR073160 Cardamine hirsuta HOM05D004270 ORTHO05D005037 2.6e-153 545.4 291 91.1
Manes.03G080050 Manihot esculenta HOM05D004270 ORTHO05D005037 2.6e-153 545.4 291 89.7
Psat3g099560 Pisum sativum HOM05D004270 ORTHO05D005037 3.4e-153 545.0 291 89.0
ClCG03G001640 Citrullus lanatus HOM05D004270 ORTHO05D005037 4.4e-153 544.7 288 91.3
FAN25G1815 Fragaria x ananassa HOM05D004270 ORTHO05D005037 5.8e-153 544.3 291 89.7
arahy.Tifrunner.gnm1.ann1.PIH8R2 Arachis hypogaea HOM05D004270 ORTHO05D005037 7.6e-153 543.9 291 88.7
Prupe.4G129800 Prunus persica HOM05D004270 ORTHO05D005037 7.6e-153 543.9 291 90.0
VMungo1383G2841 Vigna mungo HOM05D004270 ORTHO05D005037 7.6e-153 543.9 291 89.0
AT1G79500 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 9.9e-153 543.5 291 90.4
Nn6g34391 Nelumbo nucifera HOM05D004270 ORTHO05D005037 9.9e-153 543.5 288 90.3
Glyma.09G244900 Glycine max HOM05D004270 ORTHO05D005037 1.3e-152 543.1 289 89.3
Thhalv10018956m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 1.7e-152 542.7 291 89.7
Phvul.008G049000 Phaseolus vulgaris HOM05D004270 ORTHO05D005037 2.9e-152 542.0 288 89.6
GSVIVG01036737001 Vitis vinifera HOM05D004270 ORTHO05D005037 2.9e-152 542.0 291 90.0
Carub.0002s2636 Capsella rubella HOM05D004270 ORTHO05D005037 3.8e-152 541.6 291 90.4
AL2G40110 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 4.9e-152 541.2 291 90.0
TWI12G0564 Tripterygium wilfordii HOM05D004270 ORTHO05D005037 6.4e-152 540.8 291 89.7
BcaB02g07218 Brassica carinata HOM05D004270 ORTHO05D005037 1.4e-151 539.7 291 89.3
BcaC03g15900 Brassica carinata HOM05D004270 ORTHO05D005037 1.9e-151 539.3 291 89.3
Migut.H01658 Erythranthe guttata HOM05D004270 ORTHO05D005037 1.9e-151 539.3 289 89.3
TPR.G21772 Trifolium pratense HOM05D004270 ORTHO05D005037 1.9e-151 539.3 287 88.9
Actinidia07391 Actinidia chinensis HOM05D004270 ORTHO05D005037 3.2e-151 538.5 291 89.0
MD10G1213400 Malus domestica HOM05D004270 ORTHO05D005037 5.4e-151 537.7 291 88.3
Sed0021681 Sechium edule HOM05D004270 ORTHO05D005037 5.4e-151 537.7 288 89.9
TAR636G3127 Trochodendron aralioides HOM05D004270 ORTHO05D005037 5.4e-151 537.7 291 87.6
CSS0035574 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 9.2e-151 537.0 291 89.3
CsaV3_1G034040 Cucumis sativus L. HOM05D004270 ORTHO05D005037 9.2e-151 537.0 288 90.3
Medtr7g081220 Medicago truncatula HOM05D004270 ORTHO05D005037 9.2e-151 537.0 291 88.0
Sc15g0006060 Simmondsia chinensis HOM05D004270 ORTHO05D005037 9.2e-151 537.0 291 87.6
MELO3C020651.2 Cucumis melo HOM05D004270 ORTHO05D005037 2.1e-150 535.8 288 90.3
Sabra05G0151600 Salix brachista HOM05D004270 ORTHO05D005037 2.1e-150 535.8 312 83.7
Atru.chr1.67 Acer truncatum HOM05D004270 ORTHO05D005037 2.7e-150 535.4 291 88.3
MSTRG.16093 Avicennia marina HOM05D004270 ORTHO05D005037 2.7e-150 535.4 288 88.9
PGR119G1968 Punica granatum HOM05D004270 ORTHO05D005037 2.7e-150 535.4 289 89.3
MSTRG.13089 Avicennia marina HOM05D004270 ORTHO05D005037 6.0e-150 534.3 291 89.3
CAN.G84.19 Capsicum annuum HOM05D004270 ORTHO05D005037 6.0e-150 534.3 291 88.0
Hma1.2p1_0151F.1_g067120 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 6.0e-150 534.3 291 88.7
THA.LOC104813606 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 7.8e-150 533.9 287 89.5
CARHR016810 Cardamine hirsuta HOM05D004270 ORTHO05D005037 1.3e-149 533.1 289 90.0
TPR.G29107 Trifolium pratense HOM05D004270 ORTHO05D005037 2.3e-149 532.3 287 88.5
AUR62009294 Chenopodium quinoa HOM05D004270 ORTHO05D005037 5.1e-149 531.2 291 86.9
CANSAT78G1193 Cannabis sativa HOM05D004270 ORTHO05D005037 6.6e-149 530.8 293 87.0
COL.COLO4_12345 Corchorus olitorius HOM05D004270 ORTHO05D005037 6.6e-149 530.8 273 94.5
A02p22860 Brassica napus HOM05D004270 ORTHO05D005037 1.1e-148 530.0 295 88.5
Solyc11g072690.2 Solanum lycopersicum HOM05D004270 ORTHO05D005037 1.1e-148 530.0 291 87.6
Sopen11g030360 Solanum pennellii HOM05D004270 ORTHO05D005037 1.1e-148 530.0 291 87.6
arahy.Tifrunner.gnm1.ann1.WIVF2E Arachis hypogaea HOM05D004270 ORTHO05D005037 1.9e-148 529.3 298 84.2
PGSC0003DMG400025362 Solanum tuberosum HOM05D004270 ORTHO05D005037 1.9e-148 529.3 291 87.3
Aqoxy7G03543 Aquilegia oxysepala HOM05D004270 ORTHO05D005037 2.5e-148 528.9 291 86.9
EL10Ac2g04029 Beta vulgaris HOM05D004270 ORTHO05D005037 2.5e-148 528.9 291 86.6
AT1G16340 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 3.3e-148 528.5 290 87.9
SGA_v2.0_scaffold49G18204 Striga asiatica HOM05D004270 ORTHO05D005037 3.3e-148 528.5 296 87.2
BraA02t07287Z Brassica rapa HOM05D004270 ORTHO05D005037 5.6e-148 527.7 292 88.4
DCAR_016846 Daucus carota HOM05D004270 ORTHO05D005037 7.3e-148 527.3 291 85.9
AUR62041708 Chenopodium quinoa HOM05D004270 ORTHO05D005037 9.6e-148 526.9 291 86.3
AUR62043393 Chenopodium quinoa HOM05D004270 ORTHO05D005037 9.6e-148 526.9 291 86.3
C02p36680 Brassica napus HOM05D004270 ORTHO05D005037 1.2e-147 526.6 292 88.0
Cc11_g02350 Coffea canephora HOM05D004270 ORTHO05D005037 1.6e-147 526.2 291 86.3
Lsat_1_v5_gn_2_88340 Lactuca sativa HOM05D004270 ORTHO05D005037 1.6e-147 526.2 291 85.2
BraA07t30356Z Brassica rapa HOM05D004270 ORTHO05D005037 2.8e-147 525.4 291 89.0
HanXRQChr14g0449761 Helianthus annuus HOM05D004270 ORTHO05D005037 2.8e-147 525.4 291 84.9
A07p27110 Brassica napus HOM05D004270 ORTHO05D005037 3.6e-147 525.0 291 88.7
BolC6t38147H Brassica oleracea HOM05D004270 ORTHO05D005037 8.1e-147 523.9 291 88.7
AL1G28460 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 1.4e-146 523.1 290 86.6
ECA238G3087 Erigeron canadensis HOM05D004270 ORTHO05D005037 2.4e-146 522.3 292 86.0
Carub.0001s1608 Capsella rubella HOM05D004270 ORTHO05D005037 4.0e-146 521.5 290 88.3
Haze_02880 Corylus avellana HOM05D004270 ORTHO05D005037 4.0e-146 521.5 272 90.4
Ah.15g099350 Amaranthus hybridus HOM05D004270 ORTHO05D005037 1.2e-145 520.0 288 85.4
Ah.15g099360 Amaranthus hybridus HOM05D004270 ORTHO05D005037 1.2e-145 520.0 288 85.4
Os12g0210800 Oryza sativa ssp. japonica HOM05D004270 ORTHO05D005037 1.5e-145 519.6 292 86.0
MD05G1236400 Malus domestica HOM05D004270 ORTHO05D005037 2.0e-145 519.2 291 86.3
vmacro23274 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 2.0e-145 519.2 322 80.4
PSO675G6017 Papaver somniferum HOM05D004270 ORTHO05D005037 3.4e-145 518.5 290 84.8
PSO782G4107 Papaver somniferum HOM05D004270 ORTHO05D005037 3.4e-145 518.5 290 84.5
HPP92_024995 Vanilla planifolia HOM05D004270 ORTHO05D005037 7.6e-145 517.3 291 84.2
SGA_v2.0_scaffold239G44014 Striga asiatica HOM05D004270 ORTHO05D005037 2.9e-144 515.4 275 89.8
BolC2t09663H Brassica oleracea HOM05D004270 ORTHO05D005037 3.8e-144 515.0 296 86.1
Lalb_Chr19g0126381 Lupinus albus HOM05D004270 ORTHO05D005037 3.8e-144 515.0 276 89.9
PSO732G0600 Papaver somniferum HOM05D004270 ORTHO05D005037 8.4e-144 513.8 290 83.8
QL04p092971 Quercus lobata HOM05D004270 ORTHO05D005037 1.1e-143 513.5 272 90.8
Glyma.18G248300 Glycine max HOM05D004270 ORTHO05D005037 9.3e-143 510.4 270 90.0
QL04p091607 Quercus lobata HOM05D004270 ORTHO05D005037 9.3e-143 510.4 272 90.4
FAN16G1654 Fragaria x ananassa HOM05D004270 ORTHO05D005037 1.6e-142 509.6 272 89.7
BcaC08g45353 Brassica carinata HOM05D004270 ORTHO05D005037 2.7e-142 508.8 272 90.8
FAN11G3302 Fragaria x ananassa HOM05D004270 ORTHO05D005037 2.3e-141 505.8 272 89.3
MBI07_g44658_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 2.3e-141 505.8 290 85.2
PGR119G0090 Punica granatum HOM05D004270 ORTHO05D005037 3.0e-141 505.4 289 85.8
BcaB05g25203 Brassica carinata HOM05D004270 ORTHO05D005037 7.3e-140 500.7 293 85.7
unitig_744.g24505 Utricularia gibba HOM05D004270 ORTHO05D005037 4.8e-139 498.0 273 89.0
vmacro11688 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 4.8e-139 498.0 366 70.8
Zm00001eb138330 Zea mays HOM05D004270 ORTHO05D005037 4.0e-138 495.0 285 83.5
Duzib187G1262 Durio zibethinus HOM05D004270 ORTHO05D005037 5.3e-138 494.6 258 95.0
Lj7A89G46 Lonicera japonica HOM05D004270 ORTHO05D005037 5.3e-138 494.6 279 86.7
Ah.15g099340 Amaranthus hybridus HOM05D004270 ORTHO05D005037 3.4e-137 491.9 273 85.3
C06p29850 Brassica napus HOM05D004270 ORTHO05D005037 9.9e-137 490.3 272 89.0
Aa31LG4G1520 Aethionema arabicum HOM05D004270 ORTHO05D005037 2.9e-136 488.8 272 89.0
BcaC08g45351 Brassica carinata HOM05D004270 ORTHO05D005037 2.9e-136 488.8 292 82.5
Rhsim03G0145800 Rhododendron simsii HOM05D004270 ORTHO05D005037 2.4e-135 485.7 315 78.4
SalBow8G2534 Salvia bowleyana HOM05D004270 ORTHO05D005037 2.4e-135 485.7 295 81.7
SalBow8G3927 Salvia bowleyana HOM05D004270 ORTHO05D005037 2.4e-135 485.7 295 81.7
CSS0009623 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 7.1e-135 484.2 259 90.0
Rhsim06G0243500 Rhododendron simsii HOM05D004270 ORTHO05D005037 1.6e-134 483.0 300 79.7
Lj7A89G45 Lonicera japonica HOM05D004270 ORTHO05D005037 6.7e-133 477.6 266 87.6
Nitab4.5_0004015g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 4.8e-131 471.5 291 80.1
ATR0743G256 Amborella trichopoda HOM05D004270 ORTHO05D005037 1.4e-130 469.9 253 88.5
ATR0561G061 Amborella trichopoda HOM05D004270 ORTHO05D005037 4.0e-130 468.4 253 88.1
Pp3c22_7420 Physcomitrium patens HOM05D004270 ORTHO05D005037 9.9e-129 463.8 285 76.8
SMO347G0325 Selaginella moellendorffii HOM05D004270 ORTHO05D005037 2.2e-128 462.6 271 81.2
Peaxi162Scf00616g00418 Petunia axillaris HOM05D004270 ORTHO05D005037 4.9e-128 461.5 291 78.4
Eucgr.K01360 Eucalyptus grandis HOM05D004270 ORTHO05D005037 2.5e-127 459.1 247 89.1
Hma1.2p1_2351F.1_g320490 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 3.2e-127 458.8 315 75.2
Oeu026000.2 Olea europaea HOM05D004270 ORTHO05D005037 4.2e-127 458.4 324 72.2
AagrBONN_evm.TU.Sc2ySwM_344.2891 Anthoceros agrestis HOM05D004270 ORTHO05D005037 5.5e-127 458.0 286 74.1
FAN21G0266 Fragaria x ananassa HOM05D004270 ORTHO05D005037 7.1e-127 457.6 238 92.4
Lj4A247G30 Lonicera japonica HOM05D004270 ORTHO05D005037 2.1e-123 446.0 242 89.3
DCAR_013716 Daucus carota HOM05D004270 ORTHO05D005037 3.7e-123 445.3 238 89.5
PSO832G2042 Papaver somniferum HOM05D004270 ORTHO05D005037 4.6e-118 428.3 290 73.4
Mapoly0024s0056 Marchantia polymorpha HOM05D004270 ORTHO05D005037 9.7e-116 420.6 287 70.4
RcHm_v2.0_Chr6g0274781 Rosa chinensis HOM05D004270 ORTHO05D005037 3.1e-114 415.6 275 76.4
vmacro08704 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 3.4e-113 412.1 397 58.7
CiPaw.13G024200 Carya illinoinensis HOM05D004270 ORTHO05D005037 5.9e-113 411.4 220 89.1
QL04p093439 Quercus lobata HOM05D004270 ORTHO05D005037 6.7e-101 371.3 400 53.5
CDE05G0560 Ceratophyllum demersum HOM05D004270 ORTHO05D005037 6.3e-99 364.8 192 87.0
arahy.Tifrunner.gnm1.ann1.S8QNVY Arachis hypogaea HOM05D004270 ORTHO05D005037 1.8e-98 363.2 275 68.0
Nitab4.5_0006659g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 4.1e-98 362.1 198 87.9
Cpa.g.sc32.74 Carica papaya HOM05D004270 ORTHO05D005037 6.7e-93 344.7 173 94.8
arahy.Tifrunner.gnm1.ann1.IC77ZE Arachis hypogaea HOM05D004270 ORTHO05D005037 3.7e-91 339.0 271 65.7
SHI21470 Sapria himalayana HOM05D004270 ORTHO05D005037 2.3e-85 319.7 280 60.7
Cfa020378 Carpinus fangiana HOM05D004270 ORTHO05D005037 2.7e-81 306.2 245 65.7
CBR_g41577 Chara braunii HOM05D000019 ORTHO05D000048 2.6e-76 289.7 172 77.9
arahy.Tifrunner.gnm1.ann1.06J840 Arachis hypogaea HOM05D004270 ORTHO05D005037 6.1e-70 268.5 194 71.1
Haze_26612 Corylus avellana HOM05D004270 ORTHO05D005037 1.4e-69 267.3 265 49.8
arahy.Tifrunner.gnm1.ann1.IZH1PK Arachis hypogaea HOM05D004270 ORTHO05D005037 3.1e-53 213.0 193 60.1
arahy.Tifrunner.gnm1.ann1.BQF4LJ Arachis hypogaea HOM05D004270 ORTHO05D005037 1.3e-51 207.6 131 77.1
arahy.Tifrunner.gnm1.ann1.C4QR2M Arachis hypogaea HOM05D004270 ORTHO05D005037 1.3e-51 207.6 131 77.1
QL04p092150 Quercus lobata HOM05D004270 ORTHO05D005037 2.1e-38 163.7 141 63.1
MBI10_g05703_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 3.3e-31 139.8 129 61.2
SEGI_39104 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 2.1e-25 120.6 91 64.8
Lsat_1_v5_gn_3_92901 Lactuca sativa HOM05D004270 ORTHO05D005037 7.3e-23 112.1 72 66.7
vmacro07967 Vaccinium macrocarpon HOM05D004270 ORTHO05D007590 1.3e-22 111.3 100 58.0
Lsat_1_v5_gn_2_10621 Lactuca sativa HOM05D004270 ORTHO05D005037 1.8e-21 107.5 64 79.7
arahy.Tifrunner.gnm1.ann1.J4JBIL Arachis hypogaea HOM05D004270 ORTHO05D005037 2.4e-21 107.1 88 63.6
arahy.Tifrunner.gnm1.ann1.SB2A23 Arachis hypogaea HOM05D004270 ORTHO05D005037 2.4e-21 107.1 88 63.6
SEGI_07848 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 6.0e-17 92.4 51 78.4
arahy.Tifrunner.gnm1.ann1.8HXD5I Arachis hypogaea HOM05D004270 ORTHO05D005037 1.3e-14 84.7 46 87.0
RcHm_v2.0_Chr2g0110821 Rosa chinensis HOM05D004270 ORTHO05D005037 2.8e-14 83.6 45 86.7
FAN12G0414 Fragaria x ananassa HOM05D000835 ORTHO05D035555 1.0e-11 75.1 90 51.1
FAN12G0605 Fragaria x ananassa HOM05D000835 ORTHO05D035555 1.0e-11 75.1 90 51.1
arahy.Tifrunner.gnm1.ann1.FF7QMU Arachis hypogaea HOM05D004270 ORTHO05D005037 1.3e-08 64.7 45 62.2
TAR636G1752 Trochodendron aralioides HOM05D004270 ORTHO05D005037 5.1e-08 62.8 33 90.9
Dinv19578 Davidia involucrata HOM05D006464 ORTHO05D007923 2.8e-06 57.0 32 84.4


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