Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI73G1267 Tripterygium wilfordii HOM05D005980 ORTHO05D007618 4.9e-307 1057.0 532 100.0
GSVIVG01021555001 Vitis vinifera HOM05D005980 ORTHO05D007618 3.7e-206 721.8 505 71.7
Thecc.06G143900 Theobroma cacao HOM05D005980 ORTHO05D007618 1.2e-204 716.8 504 71.6
FvH4_3g05000 Fragaria vesca HOM05D005980 ORTHO05D007618 2.3e-200 702.6 525 69.0
FAN16G3332 Fragaria x ananassa HOM05D005980 ORTHO05D007618 2.3e-200 702.6 525 69.1
Nitab4.5_0000869g0050 Nicotiana tabacum HOM05D005980 ORTHO05D007618 2.3e-200 702.6 506 70.8
Ciclev10014878m.g Citrus clementina HOM05D005980 ORTHO05D007618 5.2e-200 701.4 506 70.8
Oeu032723.1 Olea europaea HOM05D005980 ORTHO05D007618 8.8e-200 700.7 501 70.5
FAN11G3650 Fragaria x ananassa HOM05D005980 ORTHO05D007618 2.0e-199 699.5 525 68.8
FAN21G1725 Fragaria x ananassa HOM05D005980 ORTHO05D007618 2.6e-199 699.1 525 69.0
Dinv21517 Davidia involucrata HOM05D005980 ORTHO05D007618 1.3e-198 696.8 505 71.1
Peaxi162Scf00670g00346 Petunia axillaris HOM05D005980 ORTHO05D007618 1.3e-198 696.8 535 67.3
PGSC0003DMG402021097 Solanum tuberosum HOM05D005980 ORTHO05D007618 2.2e-198 696.0 507 70.4
COL.COLO4_31005 Corchorus olitorius HOM05D005980 ORTHO05D007618 3.7e-198 695.3 515 68.9
MSTRG.16268 Avicennia marina HOM05D005980 ORTHO05D007618 6.3e-198 694.5 519 68.0
MD10G1257800 Malus domestica HOM05D005980 ORTHO05D007618 1.8e-197 693.0 503 71.2
Prupe.4G086000 Prunus persica HOM05D005980 ORTHO05D007618 1.8e-197 693.0 503 70.8
Sopen02g019470 Solanum pennellii HOM05D005980 ORTHO05D007618 1.8e-197 693.0 513 69.4
Solyc02g070390.3 Solanum lycopersicum HOM05D005980 ORTHO05D007618 3.1e-197 692.2 507 70.0
RcHm_v2.0_Chr5g0014971 Rosa chinensis HOM05D005980 ORTHO05D007618 4.1e-197 691.8 525 68.0
CiPaw.09G119300 Carya illinoinensis HOM05D005980 ORTHO05D007618 5.4e-197 691.4 505 69.7
Eucgr.D00262 Eucalyptus grandis HOM05D005980 ORTHO05D007618 7.0e-197 691.0 519 68.0
CSS0019737 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 9.1e-197 690.6 505 70.7
CSS0007144 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 4.5e-196 688.3 505 70.7
Gohir.D05G148400 Gossypium hirsutum HOM05D005980 ORTHO05D007618 4.5e-196 688.3 505 68.5
PGR102G3344 Punica granatum HOM05D005980 ORTHO05D007618 1.0e-195 687.2 514 68.7
Potri.001G358400 Populus trichocarpa HOM05D005980 ORTHO05D007618 2.3e-195 686.0 509 69.9
QL05p054997 Quercus lobata HOM05D005980 ORTHO05D007618 5.0e-195 684.9 506 70.0
Haze_05690 Corylus avellana HOM05D005980 ORTHO05D007618 8.6e-195 684.1 561 64.3
ClCG01G024920 Citrullus lanatus HOM05D005980 ORTHO05D007618 5.5e-194 681.4 506 70.0
Actinidia13438 Actinidia chinensis HOM05D005980 ORTHO05D007618 1.2e-193 680.2 505 68.9
Sabra16G0236200 Salix brachista HOM05D005980 ORTHO05D007618 2.1e-193 679.5 485 71.8
Aqoxy4G00005 Aquilegia oxysepala HOM05D005980 ORTHO05D007618 4.0e-192 675.2 555 63.8
CsaV3_6G052070 Cucumis sativus L. HOM05D005980 ORTHO05D007618 4.0e-192 675.2 506 69.4
Nn3g20318 Nelumbo nucifera HOM05D005980 ORTHO05D007618 8.9e-192 674.1 522 68.0
Manes.15G125300 Manihot esculenta HOM05D005980 ORTHO05D007618 7.5e-191 671.0 456 75.9
Hma1.2p1_0586F.1_g183830 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 9.8e-191 670.6 479 71.6
TAR626G0855 Trochodendron aralioides HOM05D005980 ORTHO05D007618 9.8e-191 670.6 508 67.7
Lj1A1168T68 Lonicera japonica HOM05D005980 ORTHO05D007618 1.3e-190 670.2 507 68.6
Sed0023515 Sechium edule HOM05D005980 ORTHO05D007618 1.4e-189 666.8 506 67.8
DCAR_003883 Daucus carota HOM05D005980 ORTHO05D007618 4.1e-189 665.2 495 68.7
Lj6g0019056 Lotus japonicus HOM05D005980 ORTHO05D007618 1.2e-188 663.7 506 68.2
MELO3C007103.2 Cucumis melo HOM05D005980 ORTHO05D007618 7.8e-188 661.0 525 67.0
Psat1g191560 Pisum sativum HOM05D005980 ORTHO05D007618 2.3e-187 659.4 540 64.1
Dinv32210 Davidia involucrata HOM05D005980 ORTHO05D007618 6.6e-187 657.9 448 75.4
Glyma.13G221300 Glycine max HOM05D005980 ORTHO05D007618 3.3e-186 655.6 498 68.7
Cc09_g08730 Coffea canephora HOM05D005980 ORTHO05D007618 9.5e-186 654.1 504 67.1
Aa31LG10G6710 Aethionema arabicum HOM05D005980 ORTHO05D007618 2.1e-185 652.9 512 65.4
Sed0012577 Sechium edule HOM05D005980 ORTHO05D007618 2.8e-185 652.5 506 67.2
EL10Ac1g01827 Beta vulgaris HOM05D005980 ORTHO05D007618 4.7e-185 651.7 477 69.2
Phvul.006G168100 Phaseolus vulgaris HOM05D005980 ORTHO05D007618 1.0e-184 650.6 502 68.1
PSO675G5271 Papaver somniferum HOM05D005980 ORTHO05D007618 1.8e-184 649.8 517 65.6
A05p11020 Brassica napus HOM05D005980 ORTHO05D007618 5.2e-184 648.3 482 68.0
BraA05t20047Z Brassica rapa HOM05D005980 ORTHO05D007618 1.2e-183 647.1 482 67.8
Gohir.A05G146100 Gossypium hirsutum HOM05D005980 ORTHO05D007618 1.5e-183 646.7 505 65.3
PSO541G1780 Papaver somniferum HOM05D005980 ORTHO05D007618 2.0e-183 646.4 517 65.2
SGA_v2.0_scaffold51G18642 Striga asiatica HOM05D005980 ORTHO05D007618 4.4e-183 645.2 486 67.7
AT2G34640 Arabidopsis thaliana HOM05D005980 ORTHO05D007618 1.7e-182 643.3 484 67.6
Nitab4.5_0005963g0020 Nicotiana tabacum HOM05D005980 ORTHO05D007618 2.2e-182 642.9 516 65.5
THA.LOC104820671 Tarenaya hassleriana HOM05D005980 ORTHO05D007618 2.2e-182 642.9 498 67.5
Migut.M01863 Erythranthe guttata HOM05D005980 ORTHO05D007618 3.7e-182 642.1 478 68.2
FAN25G0178 Fragaria x ananassa HOM05D005980 ORTHO05D007618 4.9e-182 641.7 533 64.9
Gorai.009G152600 Gossypium raimondii HOM05D005980 ORTHO05D007618 1.1e-181 640.6 476 67.9
BcaC02g11540 Brassica carinata HOM05D005980 ORTHO05D007618 1.4e-181 640.2 480 67.7
BolC4t23002H Brassica oleracea HOM05D005980 ORTHO05D007618 1.4e-181 640.2 480 67.7
arahy.Tifrunner.gnm1.ann1.G1ZF0U Arachis hypogaea HOM05D005980 ORTHO05D007618 5.4e-181 638.3 521 64.9
C04p14140 Brassica napus HOM05D005980 ORTHO05D007618 7.0e-181 637.9 480 67.5
ATR1098G083 Amborella trichopoda HOM05D005980 ORTHO05D007618 2.7e-180 636.0 521 65.1
TPR.G26225 Trifolium pratense HOM05D005980 ORTHO05D007618 4.6e-180 635.2 552 60.9
arahy.Tifrunner.gnm1.ann1.PI6078 Arachis hypogaea HOM05D005980 ORTHO05D007618 1.3e-179 633.6 521 64.5
AL4G30630 Arabidopsis lyrata HOM05D005980 ORTHO05D007618 2.3e-179 632.9 484 67.1
Carub.0004s1633 Capsella rubella HOM05D005980 ORTHO05D007618 2.3e-179 632.9 484 66.5
SalBow8G1809 Salvia bowleyana HOM05D005980 ORTHO05D007618 2.3e-179 632.9 519 63.8
Lalb_Chr18g0055171 Lupinus albus HOM05D005980 ORTHO05D007618 8.6e-179 630.9 523 64.1
AUR62025366 Chenopodium quinoa HOM05D005980 ORTHO05D007618 1.1e-178 630.6 475 67.8
Medtr2g018740 Medicago truncatula HOM05D005980 ORTHO05D007618 2.5e-178 629.4 544 61.9
CANSAT35G0447 Cannabis sativa HOM05D005980 ORTHO05D007618 1.6e-177 626.7 516 64.9
AUR62028384 Chenopodium quinoa HOM05D005980 ORTHO05D007618 1.6e-177 626.7 475 67.4
VMungo0540G0170 Vigna mungo HOM05D005980 ORTHO05D007618 4.7e-177 625.2 477 68.1
CARHR128740 Cardamine hirsuta HOM05D005980 ORTHO05D007618 6.8e-176 621.3 487 65.7
Rhsim13G0118300 Rhododendron simsii HOM05D005980 ORTHO05D007618 2.9e-174 615.9 550 59.6
Thhalv10016502m.g Eutrema salsugineum HOM05D005980 ORTHO05D007618 8.3e-174 614.4 486 66.3
Sp4g16910 Schrenkiella parvula HOM05D005980 ORTHO05D007618 1.2e-172 610.5 487 65.1
Ca_00513_v3 Cicer arietinum L. HOM05D005980 ORTHO05D007618 4.6e-172 608.6 480 66.0
HanXRQChr10g0301191 Helianthus annuus HOM05D005980 ORTHO05D007618 3.9e-171 605.5 514 63.0
Lj2C323G3 Lonicera japonica HOM05D005980 ORTHO05D007618 2.5e-170 602.8 503 63.8
Lsat_1_v5_gn_9_33800 Lactuca sativa HOM05D005980 ORTHO05D007618 5.2e-168 595.1 516 61.2
unitig_578.g16128 Utricularia gibba HOM05D005980 ORTHO05D007618 6.0e-164 581.6 506 60.3
BcaNung07262 Brassica carinata HOM05D005980 ORTHO05D007618 2.8e-161 572.8 435 68.0
Sc05g0005970 Simmondsia chinensis HOM05D005980 ORTHO05D007618 5.2e-160 568.5 419 68.0
Ah.12g059810 Amaranthus hybridus HOM05D005980 ORTHO05D007618 1.7e-158 563.5 475 61.9
vmacro03427 Vaccinium macrocarpon HOM05D005980 ORTHO05D007618 4.3e-154 548.9 427 65.1
ECA247G3302 Erigeron canadensis HOM05D005980 ORTHO05D007618 7.9e-148 528.1 458 62.2
Os01g0769900 Oryza sativa ssp. japonica HOM05D005980 ORTHO05D007618 1.0e-147 527.7 495 58.6
Zm00001eb152010 Zea mays HOM05D005980 ORTHO05D007618 1.5e-143 513.8 503 56.7
MD05G1278700 Malus domestica HOM05D005980 ORTHO05D007618 1.6e-103 380.9 295 67.8
HPP92_001893 Vanilla planifolia HOM05D005980 ORTHO05D007618 2.6e-103 380.2 364 57.4
Hma1.2p1_0586F.1_g183820 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 5.7e-90 335.9 277 63.5
MBI02_g18932_MAGBIO Magnolia biondii HOM05D005980 ORTHO05D007618 1.2e-82 311.6 272 62.5
AagrBONN_evm.TU.Sc2ySwM_228.94 Anthoceros agrestis HOM05D005980 ORTHO05D007618 7.5e-82 308.9 458 41.7
CDE01G0059 Ceratophyllum demersum HOM05D005980 ORTHO05D007618 3.6e-76 290.0 275 57.8
Cpa.g.sc17.56 Carica papaya HOM05D005980 ORTHO05D007618 4.7e-76 289.7 173 76.9
Cpa.g.sc17.57 Carica papaya HOM05D005980 ORTHO05D007618 2.3e-75 287.3 234 65.4
Mapoly0061s0053 Marchantia polymorpha HOM05D005980 ORTHO05D007618 3.4e-74 283.5 429 41.3
Cpa.g.c47879 Carica papaya HOM05D005980 ORTHO05D007618 2.6e-66 257.3 200 68.5
Pp3c10_12300 Physcomitrium patens HOM05D005980 ORTHO05D007618 1.1e-61 241.9 387 38.0
Pp3c3_26950 Physcomitrium patens HOM05D005980 ORTHO05D007618 7.3e-61 239.2 434 34.1
SGA_v2.0_scaffold230G43391 Striga asiatica HOM05D005980 ORTHO05D007618 4.6e-55 219.9 124 78.2
Hma1.2p1_0581F.1_g182930 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 2.5e-53 214.2 149 71.8
SGA_v2.0_scaffold6G03478 Striga asiatica HOM05D005980 ORTHO05D007618 3.3e-53 213.8 124 79.0
arahy.Tifrunner.gnm1.ann1.D5DAI6 Arachis hypogaea HOM05D005980 ORTHO05D007618 8.9e-51 205.7 263 47.1
HPP92_001892 Vanilla planifolia HOM05D005980 ORTHO05D007618 9.9e-50 202.2 166 63.9
Lsat_1_v5_gn_1_94041 Lactuca sativa HOM05D005980 ORTHO05D007618 2.3e-46 191.0 176 55.7
CBR_g48045 Chara braunii HOM05D005980 ORTHO05D007618 1.2e-44 185.3 247 42.9
MD05G1278800 Malus domestica HOM05D005980 ORTHO05D007618 2.6e-34 151.0 80 82.5
Cpa.g.sc17.55 Carica papaya HOM05D005980 ORTHO05D007618 9.6e-29 132.5 106 65.1
SEGI_30301 Sequoiadendron giganteum HOM05D005980 ORTHO05D007618 4.8e-28 130.2 226 42.0
Glyma.15G091200 Glycine max HOM05D005980 ORTHO05D007618 1.0e-22 112.5 125 56.0
MBI02_g26594_MAGBIO Magnolia biondii HOM05D005980 ORTHO05D007618 2.3e-22 111.3 81 69.1
HanXRQChr10g0301121 Helianthus annuus HOM05D005980 ORTHO05D007618 2.6e-18 97.8 93 54.8
vmacro03428 Vaccinium macrocarpon HOM05D005980 ORTHO05D007618 1.3e-17 95.5 100 57.0
Haze_05663 Corylus avellana HOM05D005980 ORTHO05D007618 1.9e-16 91.7 100 53.0
arahy.Tifrunner.gnm1.ann1.MPA65D Arachis hypogaea HOM05D005980 ORTHO05D007618 1.6e-15 88.6 53 69.8
Lsat_1_v5_gn_1_94021 Lactuca sativa HOM05D005980 ORTHO05D007618 1.9e-13 81.6 139 43.9
Lsat_1_v5_gn_7_71901 Lactuca sativa HOM05D002457 ORTHO05D005750 4.3e-13 80.5 89 47.2
MD05G1278900 Malus domestica HOM05D005980 ORTHO05D007618 1.1e-11 75.9 69 62.3
Actinidia33672 Actinidia chinensis HOM05D005980 ORTHO05D007618 1.4e-11 75.5 77 57.1
MSTRG.16269 Avicennia marina HOM05D005980 ORTHO05D007618 2.0e-10 71.6 43 67.4
Actinidia33673 Actinidia chinensis HOM05D005980 ORTHO05D007618 2.9e-09 67.8 128 39.8
Cpa.g.c48158 Carica papaya HOM05D005980 ORTHO05D007618 8.7e-06 56.2 32 71.9


User provided reference genes

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