Gene: Zm00001eb152010

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb152010
  • Transcript Identifier Zm00001eb152010_T002
  • Gene Type Coding gene
  • Location 3 : 198688169-198692897 : negative

Gene Family Information

  • ID HOM05D005980
  • #Genes/#Species 131/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb152010_T002
  • pid Zm00001eb152010_P002
  • uniprot A0A3L6FKD2
  • uniprot B4FZ81
  • entrez 100275546
  • refseq NP_001143074.1
  • refseq XP_008672559.1
  • refseq NM_001149602.1
  • refseq XM_008674337.1

Descriptions

  • Description Zm00001e019697
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042793
IBA
IEA
GOA Databaseplastid transcription
GO:0090228
IEA
GOA Databasepositive regulation of red or far-red light signaling pathway
GO:0090228
IEA
InterPropositive regulation of red or far-red light signaling pathway
GO:0009416
IEA
GOA Databaseresponse to light stimulus
GO:0009416
IEA
InterProresponse to light stimulus
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0010218
IEA
GOA Databaseresponse to far red light
GO:0010114
IEA
GOA Databaseresponse to red light
GO:0009637
IEA
GOA Databaseresponse to blue light
GO:0045893
IBA
IEA
GOA Databasepositive regulation of transcription, DNA-templated
GO:0010468
IMP
GOA Databaseregulation of gene expression

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G34640
GO:0003697
IDA
GOA Databasesingle-stranded DNA binding
GO:0003727
IDA
GOA Databasesingle-stranded RNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IBA
IEA
GOA Databasechloroplast
GO:0009507
IEA
InterProchloroplast
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus
GO:0009508
IBA
IEA
GOA Databaseplastid chromosome
GO:0042644
IEA
GOA Databasechloroplast nucleoid
GO:0000427
IEA
GOA Databaseplastid-encoded plastid RNA polymerase complex
GO:0009536
IEA
GOA Databaseplastid
GO:0009570
IEA
GOA Databasechloroplast stroma

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR034581 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12
Mapman id Description
15.6.1.2.2.5 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essential co-factor components.component PAP5/TAC12
26.4.1.3 External stimuli response.temperature.sensing and signalling.transcriptional coactivator (HEMERA)