Gene: PSO541G1780
General Information
Structural Information
- Species Papaver somniferum
- Gene Identifier PSO541G1780
- Transcript Identifier PSO541G1780.01
- Gene Type Coding gene
- Location NC_039363.1 : 151591236-151596463 : negative
Gene Family Information
- ID HOM05D005980
- #Genes/#Species 131/90
- Phylogenetic origin
- ID ORTHO05D007618
- #Genes/#Species 129/90
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid rna-XM_026539189.1
- pid XP_026394974.1
- id gene-LOC113289812
Descriptions
- product protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic-like
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010218 | ISO | PLAZA Integrative Orthology | response to far red light | AT2G34640 |
| GO:0010114 | ISO | PLAZA Integrative Orthology | response to red light | AT2G34640 |
| GO:0009637 | ISO | PLAZA Integrative Orthology | response to blue light | AT2G34640 |
| GO:0042793 | ISO | PLAZA Integrative Orthology | plastid transcription | AT2G34640 |
| GO:0010468 | ISO | PLAZA Integrative Orthology | regulation of gene expression | Zm00001eb152010 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT2G34640 |
| GO:0090228 | IEA | InterPro | positive regulation of red or far-red light signaling pathway | |
| GO:0009416 | IEA | InterPro | response to light stimulus | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003697 | ISO | PLAZA Integrative Orthology | single-stranded DNA binding | Zm00001eb152010 |
| GO:0003727 | ISO | PLAZA Integrative Orthology | single-stranded RNA binding | Zm00001eb152010 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G34640 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042644 | ISO | PLAZA Integrative Orthology | chloroplast nucleoid | AT2G34640 |
| GO:0000427 | ISO | PLAZA Integrative Orthology | plastid-encoded plastid RNA polymerase complex | AT2G34640 |
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:0009508 | ISO | PLAZA Integrative Orthology | plastid chromosome | AT2G34640 |
| GO:0009507 | IEA | InterPro | chloroplast |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR034581 | Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 |
| Mapman id | Description |
|---|---|
| 15.6.1.2.2.5 | RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essential co-factor components.component PAP5/TAC12 |
| 26.4.1.3 | External stimuli response.temperature.sensing and signalling.transcriptional coactivator (HEMERA) |