Gene: Pp3c3_26950

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c3_26950
  • Transcript Identifier Pp3c3_26950V3.1
  • Gene Type Coding gene
  • Location Chr03 : 18439278-18442417 : negative

Gene Family Information

  • ID HOM05D005980
  • #Genes/#Species 131/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c3_26950V3.1
  • pacid 32941162
  • alias Pp1s376_31V6
  • alias Phpat.003G106200
  • alias Phypa_99071
  • uniprot A0A2K1KW58

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010114
ISO
PLAZA Integrative Orthologyresponse to red light AT2G34640
GO:0009637
ISO
PLAZA Integrative Orthologyresponse to blue light AT2G34640
GO:0010468
ISO
PLAZA Integrative Orthologyregulation of gene expression Zm00001eb152010
GO:0010218
ISO
PLAZA Integrative Orthologyresponse to far red light AT2G34640
GO:0042793
IBA
GOA Databaseplastid transcription
GO:0045893
IBA
GOA Databasepositive regulation of transcription, DNA-templated
GO:0009416
IEA
GOA Databaseresponse to light stimulus
GO:0009416
IEA
InterProresponse to light stimulus
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0090228
IEA
GOA Databasepositive regulation of red or far-red light signaling pathway
GO:0090228
IEA
InterPropositive regulation of red or far-red light signaling pathway

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003697
ISO
PLAZA Integrative Orthologysingle-stranded DNA binding Zm00001eb152010
GO:0003727
ISO
PLAZA Integrative Orthologysingle-stranded RNA binding Zm00001eb152010
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G34640

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009508
IBA
GOA Databaseplastid chromosome
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid AT2G34640
GO:0000427
ISO
PLAZA Integrative Orthologyplastid-encoded plastid RNA polymerase complex AT2G34640
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus
GO:0009507
IBA
IEA
GOA Databasechloroplast
GO:0009507
IEA
InterProchloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR034581 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12
Mapman id Description
15.6.1.2.2.5 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essential co-factor components.component PAP5/TAC12
26.4.1.3 External stimuli response.temperature.sensing and signalling.transcriptional coactivator (HEMERA)