Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI36G1430 Tripterygium wilfordii HOM05D002628 ORTHO05D002785 1.4e-50 202.6 99 100.0
TWI36G1593 Tripterygium wilfordii HOM05D002628 ORTHO05D002785 2.7e-33 145.2 78 88.5
TWI18G0012 Tripterygium wilfordii HOM05D002628 ORTHO05D002785 5.9e-33 144.1 78 88.5
TWI75G1871 Tripterygium wilfordii HOM05D002628 ORTHO05D002785 1.0e-29 133.3 82 81.7
Atru.chr5.2101 Acer truncatum HOM05D002628 ORTHO05D002785 1.8e-29 132.5 78 74.4
Dinv19196 Davidia involucrata HOM05D002628 ORTHO05D002785 4.9e-27 124.4 78 71.8
Cpa.g.sc8.144 Carica papaya HOM05D002628 ORTHO05D002785 5.4e-26 120.9 78 73.1
Ciclev10018446m.g Citrus clementina HOM05D002628 ORTHO05D002785 1.6e-25 119.4 78 70.5
QL09p053994 Quercus lobata HOM05D002628 ORTHO05D002785 1.6e-25 119.4 73 75.3
Manes.12G045400 Manihot esculenta HOM05D002628 ORTHO05D002785 2.7e-25 118.6 94 60.6
Phvul.008G126600 Phaseolus vulgaris HOM05D002628 ORTHO05D002785 3.5e-25 118.2 78 71.8
Thecc.01G224600 Theobroma cacao HOM05D002628 ORTHO05D002785 3.5e-25 118.2 78 70.5
Glyma.08G352600 Glycine max HOM05D002628 ORTHO05D002785 4.6e-25 117.9 78 71.8
MD10G1163500 Malus domestica HOM05D002628 ORTHO05D002785 4.6e-25 117.9 77 71.4
Glyma.18G169600 Glycine max HOM05D002628 ORTHO05D002785 1.7e-24 115.9 76 73.7
GSVIVG01028685001 Vitis vinifera HOM05D002628 ORTHO05D002785 1.7e-24 115.9 99 57.6
Prupe.8G201800 Prunus persica HOM05D002628 ORTHO05D002785 2.3e-24 115.5 77 68.8
CANSAT01G2524 Cannabis sativa HOM05D002628 ORTHO05D002785 3.0e-24 115.2 77 67.5
Haze_24810 Corylus avellana HOM05D002628 ORTHO05D002785 3.0e-24 115.2 73 71.2
Manes.13G047100 Manihot esculenta HOM05D002628 ORTHO05D002785 3.9e-24 114.8 75 69.3
Cfa002577 Carpinus fangiana HOM05D002628 ORTHO05D002785 5.0e-24 114.4 73 71.2
MD05G1174400 Malus domestica HOM05D002628 ORTHO05D002785 5.0e-24 114.4 78 70.5
Dinv12687 Davidia involucrata HOM05D002628 ORTHO05D002785 8.6e-24 113.6 78 67.9
Duzib138G1695 Durio zibethinus HOM05D002628 ORTHO05D002785 8.6e-24 113.6 78 67.9
Gorai.004G226000 Gossypium raimondii HOM05D002628 ORTHO05D002785 1.1e-23 113.2 78 67.9
Psat3g145600 Pisum sativum HOM05D002628 ORTHO05D002785 1.1e-23 113.2 78 67.9
Duzib211G0579 Durio zibethinus HOM05D002628 ORTHO05D002785 2.5e-23 112.1 78 67.9
arahy.Tifrunner.gnm1.ann1.82MK2E Arachis hypogaea HOM05D002628 ORTHO05D002785 4.3e-23 111.3 78 65.4
Duzib133G0258 Durio zibethinus HOM05D002628 ORTHO05D002785 4.3e-23 111.3 78 67.9
Gohir.D08G212600 Gossypium hirsutum HOM05D002628 ORTHO05D002785 4.3e-23 111.3 78 66.7
Gohir.A08G194900 Gossypium hirsutum HOM05D002628 ORTHO05D002785 7.3e-23 110.5 78 66.7
COL.COLO4_15677 Corchorus olitorius HOM05D002628 ORTHO05D002785 9.5e-23 110.2 78 65.4
arahy.Tifrunner.gnm1.ann1.23VDWQ Arachis hypogaea HOM05D002628 ORTHO05D002785 1.2e-22 109.8 78 64.1
Lj1g0019543 Lotus japonicus HOM05D002628 ORTHO05D002785 1.6e-22 109.4 78 65.4
PGR083G0125 Punica granatum HOM05D002628 ORTHO05D002785 1.6e-22 109.4 77 63.6
Gohir.A11G137900 Gossypium hirsutum HOM05D002628 ORTHO05D002785 2.1e-22 109.0 77 66.2
TPR.G31107 Trifolium pratense HOM05D002628 ORTHO05D002785 2.1e-22 109.0 78 65.4
Gohir.D11G144700 Gossypium hirsutum HOM05D002628 ORTHO05D002785 2.8e-22 108.6 77 66.2
Gorai.007G155000 Gossypium raimondii HOM05D002628 ORTHO05D002785 2.8e-22 108.6 77 66.2
THA.LOC104821651 Tarenaya hassleriana HOM05D002628 ORTHO05D002785 2.8e-22 108.6 78 64.1
Glyma.16G093800 Glycine max HOM05D002628 ORTHO05D002785 8.0e-22 107.1 78 62.8
CiPaw.04G105000 Carya illinoinensis HOM05D002628 ORTHO05D002785 1.1e-21 106.7 73 65.8
Lalb_Chr01g0022291 Lupinus albus HOM05D002628 ORTHO05D002785 1.1e-21 106.7 72 68.1
Ca_26871_v3 Cicer arietinum L. HOM05D002628 ORTHO05D002785 1.4e-21 106.3 78 65.4
DCAR_012652 Daucus carota HOM05D002628 ORTHO05D002785 1.4e-21 106.3 78 64.1
RcHm_v2.0_Chr6g0284671 Rosa chinensis HOM05D002628 ORTHO05D002785 1.4e-21 106.3 72 70.8
CiPaw.03G148700 Carya illinoinensis HOM05D002628 ORTHO05D002785 3.1e-21 105.1 73 67.1
Hma1.2p1_0226F.1_g095630 Hydrangea macrophylla HOM05D002628 ORTHO05D002785 3.1e-21 105.1 76 63.2
Potri.002G243400 Populus trichocarpa HOM05D002628 ORTHO05D002785 3.1e-21 105.1 77 66.2
Potri.014G189900 Populus trichocarpa HOM05D002628 ORTHO05D002785 5.2e-21 104.4 70 68.6
FAN27G0734 Fragaria x ananassa HOM05D002628 ORTHO05D002785 8.9e-21 103.6 79 64.6
Lj1A87T37 Lonicera japonica HOM05D002628 ORTHO05D002785 8.9e-21 103.6 78 61.5
Glyma.03G081300 Glycine max HOM05D002628 ORTHO05D002785 1.2e-20 103.2 76 61.8
FAN15G1468 Fragaria x ananassa HOM05D002628 ORTHO05D002785 1.5e-20 102.8 77 66.2
Gorai.001G187100 Gossypium raimondii HOM05D002628 ORTHO05D002785 2.0e-20 102.4 78 62.8
Gohir.D07G163200 Gossypium hirsutum HOM05D002628 ORTHO05D002785 2.6e-20 102.1 78 62.8
Lalb_Chr03g0041701 Lupinus albus HOM05D002628 ORTHO05D002785 3.4e-20 101.7 77 62.3
Rhsim01G0255500 Rhododendron simsii HOM05D002628 ORTHO05D002785 3.4e-20 101.7 76 60.5
Cc01_g16950 Coffea canephora HOM05D002628 ORTHO05D002785 4.4e-20 101.3 77 63.6
Gohir.D07G207400 Gossypium hirsutum HOM05D002628 ORTHO05D002785 5.8e-20 100.9 78 62.8
Medtr7g056603 Medicago truncatula HOM05D002628 ORTHO05D002785 5.8e-20 100.9 78 61.5
TAR362G0009 Trochodendron aralioides HOM05D002628 ORTHO05D002785 7.5e-20 100.5 79 60.8
Lalb_Chr19g0125651 Lupinus albus HOM05D002628 ORTHO05D002785 1.3e-19 99.8 78 60.3
Lsat_1_v5_gn_8_89820 Lactuca sativa HOM05D002628 ORTHO05D002785 2.2e-19 99.0 78 60.3
Gohir.A07G157100 Gossypium hirsutum HOM05D002628 ORTHO05D002785 2.9e-19 98.6 76 63.2
CSS0046762 Camellia sinensis var. sinensis HOM05D002628 ORTHO05D002785 4.9e-19 97.8 77 59.7
Thhalv10002368m.g Eutrema salsugineum HOM05D002628 ORTHO05D002785 4.9e-19 97.8 78 57.7
Sabra14G0142700 Salix brachista HOM05D002628 ORTHO05D002785 4.9e-19 97.8 76 61.8
Lj2C1130G3 Lonicera japonica HOM05D002628 ORTHO05D002785 6.4e-19 97.4 78 56.4
vmacro14750 Vaccinium macrocarpon HOM05D002628 ORTHO05D002785 6.4e-19 97.4 76 59.2
AT3G24870 Arabidopsis thaliana HOM05D002628 ORTHO05D002785 8.3e-19 97.1 78 57.7
AT3G24880 Arabidopsis thaliana HOM05D002628 ORTHO05D002785 8.3e-19 97.1 78 57.7
BcaB03g16110 Brassica carinata HOM05D002628 ORTHO05D002785 1.1e-18 96.7 70 67.1
A04p08930 Brassica napus HOM05D002628 ORTHO05D002785 1.1e-18 96.7 72 65.3
C04p42820 Brassica napus HOM05D002628 ORTHO05D002785 1.1e-18 96.7 72 65.3
BolC4t25848H Brassica oleracea HOM05D002628 ORTHO05D002785 1.1e-18 96.7 72 65.3
BraA04t16589Z Brassica rapa HOM05D002628 ORTHO05D002785 1.1e-18 96.7 72 65.3
DCAR_018575 Daucus carota HOM05D002628 ORTHO05D002785 1.1e-18 96.7 72 62.5
Gorai.001G233800 Gossypium raimondii HOM05D002628 ORTHO05D002785 1.1e-18 96.7 80 61.2
Aa31LG8G11310 Aethionema arabicum HOM05D002628 ORTHO05D002785 1.4e-18 96.3 76 61.8
CARHR101290 Cardamine hirsuta HOM05D002628 ORTHO05D002785 1.4e-18 96.3 78 57.7
Sabra02G0185300 Salix brachista HOM05D002628 ORTHO05D002785 2.4e-18 95.5 124 42.7
ECA236G2127 Erigeron canadensis HOM05D002628 ORTHO05D002785 3.2e-18 95.1 78 59.0
Phvul.010G018800 Phaseolus vulgaris HOM05D002628 ORTHO05D002785 3.2e-18 95.1 83 56.6
Gohir.A07G201100 Gossypium hirsutum HOM05D002628 ORTHO05D002785 4.1e-18 94.7 80 60.0
BcaC02g09445 Brassica carinata HOM05D002628 ORTHO05D002785 5.4e-18 94.4 72 63.9
MSTRG.12779 Avicennia marina HOM05D002628 ORTHO05D002785 7.0e-18 94.0 76 59.2
Carub.0003s2526 Capsella rubella HOM05D002628 ORTHO05D002785 7.0e-18 94.0 78 56.4
Migut.D02520 Erythranthe guttata HOM05D002628 ORTHO05D002785 7.0e-18 94.0 78 56.4
HanXRQChr14g0445581 Helianthus annuus HOM05D002628 ORTHO05D002785 7.0e-18 94.0 76 59.2
Sp3g22600 Schrenkiella parvula HOM05D002628 ORTHO05D002785 7.0e-18 94.0 79 57.0
SpUn0027_0080 Schrenkiella parvula HOM05D002628 ORTHO05D002785 7.0e-18 94.0 79 57.0
Carub.0003s2528 Capsella rubella HOM05D002628 ORTHO05D002785 9.2e-18 93.6 78 59.0
HanXRQChr01g0015181 Helianthus annuus HOM05D002628 ORTHO05D002785 1.2e-17 93.2 78 55.1
HanXRQChr04g0108091 Helianthus annuus HOM05D002628 ORTHO05D002785 1.6e-17 92.8 73 63.0
AL3G40640 Arabidopsis lyrata HOM05D002628 ORTHO05D002785 2.0e-17 92.4 78 57.7
AUR62008919 Chenopodium quinoa HOM05D002628 ORTHO05D002785 2.0e-17 92.4 80 56.2
Aa31LG9G4800 Aethionema arabicum HOM05D002628 ORTHO05D002785 2.7e-17 92.0 78 57.7
AL9U11010 Arabidopsis lyrata HOM05D002628 ORTHO05D002785 2.7e-17 92.0 76 59.2
AUR62001094 Chenopodium quinoa HOM05D002628 ORTHO05D002785 2.7e-17 92.0 75 56.0
Hund18389 Selenicereus undatus HOM05D002628 ORTHO05D002785 3.5e-17 91.7 76 53.9
A03p43970 Brassica napus HOM05D002628 ORTHO05D002785 6.0e-17 90.9 78 55.1
BraA03t13528Z Brassica rapa HOM05D002628 ORTHO05D002785 6.0e-17 90.9 78 55.1
Eucgr.H00795 Eucalyptus grandis HOM05D002628 ORTHO05D002785 6.0e-17 90.9 76 59.2
SalBow3G0995 Salvia bowleyana HOM05D002628 ORTHO05D002785 6.0e-17 90.9 72 58.3
SalBow6G2694 Salvia bowleyana HOM05D002628 ORTHO05D002785 6.0e-17 90.9 84 53.6
SalBow6G7039 Salvia bowleyana HOM05D002628 ORTHO05D002785 7.8e-17 90.5 84 53.6
BcaC01g03251 Brassica carinata HOM05D002628 ORTHO05D002785 1.3e-16 89.7 79 55.7
C03p54320 Brassica napus HOM05D002628 ORTHO05D002785 1.3e-16 89.7 79 55.7
BolC3t17718H Brassica oleracea HOM05D002628 ORTHO05D002785 1.3e-16 89.7 79 55.7
CSS0049532 Camellia sinensis var. sinensis HOM05D002628 ORTHO05D002785 1.3e-16 89.7 74 59.5
Sc05g0002110 Simmondsia chinensis HOM05D002628 ORTHO05D002785 1.3e-16 89.7 73 57.5
BcaB08g34428 Brassica carinata HOM05D002628 ORTHO05D002785 1.7e-16 89.4 78 52.6
Solyc06g083420.3 Solanum lycopersicum HOM05D002628 ORTHO05D002785 3.9e-16 88.2 76 60.5
Sopen06g034780 Solanum pennellii HOM05D002628 ORTHO05D002785 5.0e-16 87.8 76 60.5
Actinidia37601 Actinidia chinensis HOM05D002628 ORTHO05D002785 8.6e-16 87.0 77 55.8
CAN.G771.81 Capsicum annuum HOM05D002628 ORTHO05D002785 8.6e-16 87.0 76 61.8
FAN24G2878 Fragaria x ananassa HOM05D002628 ORTHO05D002785 8.6e-16 87.0 79 59.5
Lj3g0004121 Lotus japonicus HOM05D002628 ORTHO05D002785 8.6e-16 87.0 78 55.1
FvH4_2g18860 Fragaria vesca HOM05D002628 ORTHO05D002785 1.1e-15 86.7 77 61.0
vmacro02763 Vaccinium macrocarpon HOM05D002628 ORTHO05D002785 1.1e-15 86.7 71 57.7
VMungo1383G1872 Vigna mungo HOM05D002628 ORTHO05D002785 1.1e-15 86.7 135 40.7
MSTRG.18000 Avicennia marina HOM05D002628 ORTHO05D002785 1.5e-15 86.3 76 53.9
A07p07330 Brassica napus HOM05D002628 ORTHO05D002785 1.5e-15 86.3 100 45.0
BraA07t28522Z Brassica rapa HOM05D002628 ORTHO05D002785 1.5e-15 86.3 100 45.0
Actinidia23721 Actinidia chinensis HOM05D002628 ORTHO05D002785 1.9e-15 85.9 78 52.6
BcaB06g26704 Brassica carinata HOM05D002628 ORTHO05D002785 1.9e-15 85.9 78 52.6
TAR633G2086 Trochodendron aralioides HOM05D002628 ORTHO05D002785 1.9e-15 85.9 79 57.0
C07p11110 Brassica napus HOM05D002628 ORTHO05D002785 2.5e-15 85.5 78 51.3
Oeu004073.1 Olea europaea HOM05D002628 ORTHO05D002785 2.5e-15 85.5 76 56.6
PSO675G2169 Papaver somniferum HOM05D002628 ORTHO05D002785 3.3e-15 85.1 75 57.3
Hund05562 Selenicereus undatus HOM05D002628 ORTHO05D002785 3.3e-15 85.1 76 52.6
BolC7t41583H Brassica oleracea HOM05D002628 ORTHO05D002785 4.3e-15 84.7 78 51.3
CAN.G15.8 Capsicum annuum HOM05D002628 ORTHO05D002785 5.6e-15 84.3 73 56.2
Lsat_1_v5_gn_5_180401 Lactuca sativa HOM05D002628 ORTHO05D002785 7.3e-15 84.0 77 53.2
Nn1g07877 Nelumbo nucifera HOM05D002628 ORTHO05D002785 9.5e-15 83.6 78 52.6
BcaC06g35765 Brassica carinata HOM05D002628 ORTHO05D002785 1.2e-14 83.2 78 52.6
Solyc09g060080.4 Solanum lycopersicum HOM05D002628 ORTHO05D002785 2.1e-14 82.4 73 56.2
Sopen09g023690 Solanum pennellii HOM05D002628 ORTHO05D002785 2.1e-14 82.4 73 56.2
Actinidia09479 Actinidia chinensis HOM05D002628 ORTHO05D002785 2.8e-14 82.0 75 54.7
Nitab4.5_0001564g0060 Nicotiana tabacum HOM05D002628 ORTHO05D002785 2.8e-14 82.0 76 57.9
ECA248G1308 Erigeron canadensis HOM05D002628 ORTHO05D002785 4.7e-14 81.3 78 50.0
Aqoxy6G02008 Aquilegia oxysepala HOM05D002628 ORTHO05D002785 8.1e-14 80.5 79 53.2
CARHR218580 Cardamine hirsuta HOM05D002628 ORTHO05D002785 4.0e-13 78.2 68 57.4
Nitab4.5_0000045g0240 Nicotiana tabacum HOM05D002628 ORTHO05D002785 5.2e-13 77.8 78 53.8
ECA247G3882 Erigeron canadensis HOM05D002628 ORTHO05D002785 1.2e-12 76.6 74 51.4
Rhsim13G0045600 Rhododendron simsii HOM05D002628 ORTHO05D002785 1.2e-12 76.6 73 54.8
DCAR_000525 Daucus carota HOM05D002628 ORTHO05D002785 2.6e-12 75.5 56 64.3
Nitab4.5_0003758g0060 Nicotiana tabacum HOM05D002628 ORTHO05D002785 3.4e-12 75.1 78 51.3
Psat2g110360 Pisum sativum HOM05D002628 ORTHO05D002785 3.4e-12 75.1 56 62.5
Migut.N00621 Erythranthe guttata HOM05D002628 ORTHO05D002785 5.8e-12 74.3 76 46.1
Psat5g238800 Pisum sativum HOM05D000764 ORTHO05D002785 9.9e-12 73.6 56 62.5
Psat5g238960 Pisum sativum HOM05D000764 ORTHO05D002785 9.9e-12 73.6 56 62.5
Eucgr.K02162 Eucalyptus grandis HOM05D002628 ORTHO05D002785 2.2e-11 72.4 68 50.0
Nitab4.5_0002223g0030 Nicotiana tabacum HOM05D002628 ORTHO05D002785 4.9e-11 71.2 76 50.0
Ah.15g094000 Amaranthus hybridus HOM05D002628 ORTHO05D002785 8.3e-11 70.5 81 44.4
MBI18_g12534_MAGBIO Magnolia biondii HOM05D002628 ORTHO05D002785 1.1e-10 70.1 102 39.2
Actinidia39759 Actinidia chinensis HOM05D002628 ORTHO05D002785 1.9e-10 69.3 91 41.8
Sed0004451 Sechium edule HOM05D002628 ORTHO05D002785 1.9e-10 69.3 69 47.8
MELO3C021029.2 Cucumis melo HOM05D002628 ORTHO05D002785 3.2e-10 68.6 67 52.2
CsaV3_7G026060 Cucumis sativus L. HOM05D002628 ORTHO05D002785 3.2e-10 68.6 67 53.7
ClCG09G008950 Citrullus lanatus HOM05D002628 ORTHO05D002785 2.7e-09 65.5 72 45.8
Sed0013250 Sechium edule HOM05D002628 ORTHO05D002785 1.0e-08 63.5 62 48.4
unitig_736.g22339 Utricularia gibba HOM05D002628 ORTHO05D002785 3.0e-08 62.0 63 44.4
CDE07G1586 Ceratophyllum demersum HOM05D002628 ORTHO05D002785 3.9e-08 61.6 99 34.3
SGA_v2.0_scaffold6G03236 Striga asiatica HOM05D002628 ORTHO05D002785 3.9e-08 61.6 75 48.0
CDE04G0039 Ceratophyllum demersum HOM05D002628 ORTHO05D002785 1.5e-07 59.7 99 33.3
unitig_37.g12886 Utricularia gibba HOM05D002628 ORTHO05D002785 1.5e-07 59.7 64 45.3
SHI31153 Sapria himalayana HOM05D002628 ORTHO05D002785 1.6e-06 56.2 112 33.9
HPP92_002819 Vanilla planifolia HOM05D002628 ORTHO05D002785 2.8e-06 55.5 76 43.4


User provided reference genes

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