Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI15G0159 Tripterygium wilfordii HOM05D005108 ORTHO05D006171 9.8e-68 260.0 131 100.0
TWI15G0284 Tripterygium wilfordii HOM05D005108 ORTHO05D006171 5.8e-60 234.2 120 97.5
RcHm_v2.0_Chr1g0331271 Rosa chinensis HOM05D005108 ORTHO05D006171 5.6e-55 217.6 120 89.2
FvH4_7g05000 Fragaria vesca HOM05D005108 ORTHO05D006171 1.6e-54 216.1 120 88.3
FAN06G2034 Fragaria x ananassa HOM05D005108 ORTHO05D006171 1.6e-54 216.1 120 88.3
Prupe.2G060900 Prunus persica HOM05D005108 ORTHO05D006171 6.2e-54 214.2 120 88.3
MD07G1054300 Malus domestica HOM05D005108 ORTHO05D006171 1.1e-53 213.4 120 87.5
FAN03G1083 Fragaria x ananassa HOM05D005108 ORTHO05D006171 1.4e-53 213.0 120 87.5
Manes.10G065200 Manihot esculenta HOM05D005108 ORTHO05D006171 1.4e-53 213.0 120 86.7
GSVIVG01027314001 Vitis vinifera HOM05D005108 ORTHO05D006171 3.1e-53 211.8 120 87.5
Dinv24598 Davidia involucrata HOM05D005108 ORTHO05D006171 4.0e-53 211.5 120 86.7
RcHm_v2.0_Chr1g0331301 Rosa chinensis HOM05D005108 ORTHO05D006171 5.2e-53 211.1 117 88.0
TAR633G2703 Trochodendron aralioides HOM05D005108 ORTHO05D006171 1.5e-52 209.5 120 85.8
CiPaw.01G118100 Carya illinoinensis HOM05D005108 ORTHO05D006171 2.6e-52 208.8 120 82.5
CSS0042253 Camellia sinensis var. sinensis HOM05D005108 ORTHO05D006171 3.4e-52 208.4 120 85.0
CAN.G134.52 Capsicum annuum HOM05D005108 ORTHO05D006171 3.4e-52 208.4 120 85.8
MBI19_g19123_MAGBIO Magnolia biondii HOM05D005108 ORTHO05D006171 3.4e-52 208.4 120 84.2
Atru.chr12.1231 Acer truncatum HOM05D005108 ORTHO05D006171 4.4e-52 208.0 120 85.0
Peaxi162Scf00647g00324 Petunia axillaris HOM05D005108 ORTHO05D006171 5.8e-52 207.6 120 85.8
QL05p027656 Quercus lobata HOM05D005108 ORTHO05D006171 5.8e-52 207.6 120 81.7
PSO541G5178 Papaver somniferum HOM05D005108 ORTHO05D006171 7.6e-52 207.2 120 83.3
Sopen01g040610 Solanum pennellii HOM05D005108 ORTHO05D006171 7.6e-52 207.2 120 85.0
CANSAT56G0991 Cannabis sativa HOM05D005108 ORTHO05D006171 9.9e-52 206.8 120 85.0
PSO675G3383 Papaver somniferum HOM05D005108 ORTHO05D006171 1.7e-51 206.1 120 82.5
Solyc01g096900.3 Solanum lycopersicum HOM05D005108 ORTHO05D006171 1.7e-51 206.1 120 84.2
Nitab4.5_0005056g0040 Nicotiana tabacum HOM05D005108 ORTHO05D006171 2.2e-51 205.7 120 85.0
Nitab4.5_0001611g0100 Nicotiana tabacum HOM05D005108 ORTHO05D006171 2.9e-51 205.3 120 85.0
Psat6g044120 Pisum sativum HOM05D005108 ORTHO05D006171 2.9e-51 205.3 120 82.5
MD02G1265100 Malus domestica HOM05D005108 ORTHO05D006171 3.7e-51 204.9 120 86.7
Cfa014950 Carpinus fangiana HOM05D005108 ORTHO05D006171 4.9e-51 204.5 120 80.8
Nn2g14646 Nelumbo nucifera HOM05D005108 ORTHO05D006171 4.9e-51 204.5 120 83.3
Ca_14181_v3 Cicer arietinum L. HOM05D005108 ORTHO05D006171 6.4e-51 204.1 120 82.5
Glyma.09G120200 Glycine max HOM05D005108 ORTHO05D006171 6.4e-51 204.1 120 82.5
PGR044G2262 Punica granatum HOM05D005108 ORTHO05D006171 6.4e-51 204.1 120 83.3
DCAR_006625 Daucus carota HOM05D005108 ORTHO05D006171 8.4e-51 203.8 120 83.3
FAN01G1063 Fragaria x ananassa HOM05D005108 ORTHO05D006171 8.4e-51 203.8 108 90.7
FAN10G0981 Fragaria x ananassa HOM05D005108 ORTHO05D006171 8.4e-51 203.8 108 90.7
Lj2g0000078 Lotus japonicus HOM05D005108 ORTHO05D006171 8.4e-51 203.8 120 82.5
Actinidia19615 Actinidia chinensis HOM05D005108 ORTHO05D006171 1.1e-50 203.4 120 83.3
Sed0020738 Sechium edule HOM05D005108 ORTHO05D006171 1.4e-50 203.0 120 83.3
vmacro13787 Vaccinium macrocarpon HOM05D005108 ORTHO05D006171 1.4e-50 203.0 120 80.8
MSTRG.20478 Avicennia marina HOM05D005108 ORTHO05D006171 1.9e-50 202.6 120 80.8
Duzib106G1854 Durio zibethinus HOM05D005108 ORTHO05D006171 1.9e-50 202.6 120 85.0
Os03g0812000 Oryza sativa ssp. japonica HOM05D005108 ORTHO05D006171 1.9e-50 202.6 120 81.7
TPR.G36949 Trifolium pratense HOM05D005108 ORTHO05D006171 1.9e-50 202.6 120 81.7
CsaV3_6G035790 Cucumis sativus L. HOM05D005108 ORTHO05D006171 2.4e-50 202.2 120 83.3
Hma1.2p1_0892F.1_g233240 Hydrangea macrophylla HOM05D005108 ORTHO05D006171 2.4e-50 202.2 139 74.8
Lalb_Chr10g0096011 Lupinus albus HOM05D005108 ORTHO05D006171 2.4e-50 202.2 120 81.7
COL.COLO4_28907 Corchorus olitorius HOM05D005108 ORTHO05D006171 4.1e-50 201.4 120 84.2
Sc09g0004910 Simmondsia chinensis HOM05D005108 ORTHO05D006171 5.4e-50 201.1 120 81.7
arahy.Tifrunner.gnm1.ann1.3FCU7M Arachis hypogaea HOM05D005108 ORTHO05D006171 7.1e-50 200.7 120 81.7
Phvul.003G022300 Phaseolus vulgaris HOM05D005108 ORTHO05D006171 7.1e-50 200.7 120 80.8
Sp3g09010 Schrenkiella parvula HOM05D005108 ORTHO05D006171 7.1e-50 200.7 120 80.8
EL10Ac4g08769 Beta vulgaris HOM05D005108 ORTHO05D006171 9.2e-50 200.3 120 81.7
AUR62014305 Chenopodium quinoa HOM05D005108 ORTHO05D006171 9.2e-50 200.3 120 80.8
Thhalv10020005m.g Eutrema salsugineum HOM05D005108 ORTHO05D006171 9.2e-50 200.3 120 80.0
Medtr1g031690 Medicago truncatula HOM05D005108 ORTHO05D006171 1.2e-49 199.9 120 80.0
COL.COLO4_28912 Corchorus olitorius HOM05D005108 ORTHO05D006171 1.6e-49 199.5 120 83.3
Eucgr.J00313 Eucalyptus grandis HOM05D005108 ORTHO05D006171 1.6e-49 199.5 120 80.0
Gorai.012G020500 Gossypium raimondii HOM05D005108 ORTHO05D006171 1.6e-49 199.5 120 82.5
Potri.010G247000 Populus trichocarpa HOM05D005108 ORTHO05D006171 1.6e-49 199.5 120 83.3
ATR0068G093 Amborella trichopoda HOM05D005108 ORTHO05D006171 2.1e-49 199.1 120 79.2
AUR62034097 Chenopodium quinoa HOM05D005108 ORTHO05D006171 2.1e-49 199.1 120 80.0
SalBow8G0010 Salvia bowleyana HOM05D005108 ORTHO05D006171 2.1e-49 199.1 120 80.0
SGA_v2.0_scaffold244G44358 Striga asiatica HOM05D005108 ORTHO05D006171 2.1e-49 199.1 120 80.8
Glyma.07G166000 Glycine max HOM05D005108 ORTHO05D006171 2.7e-49 198.7 120 81.7
Rhsim07G0072200 Rhododendron simsii HOM05D005108 ORTHO05D006171 2.7e-49 198.7 120 80.0
Gohir.D04G017700 Gossypium hirsutum HOM05D005108 ORTHO05D006171 3.5e-49 198.4 120 81.7
Sabra10G0192400 Salix brachista HOM05D005108 ORTHO05D006171 3.5e-49 198.4 120 82.5
Gohir.A05G398300 Gossypium hirsutum HOM05D005108 ORTHO05D006171 4.6e-49 198.0 120 81.7
Thecc.10G129800 Theobroma cacao HOM05D005108 ORTHO05D006171 7.8e-49 197.2 120 82.5
Zm00001eb212160 Zea mays HOM05D005108 ORTHO05D006171 7.8e-49 197.2 120 80.0
C03p44330 Brassica napus HOM05D005108 ORTHO05D006171 1.0e-48 196.8 121 80.2
BolC3t16703H Brassica oleracea HOM05D005108 ORTHO05D006171 1.0e-48 196.8 121 80.2
Migut.B01161 Erythranthe guttata HOM05D005108 ORTHO05D006171 1.0e-48 196.8 120 80.0
Carub.0003s0992 Capsella rubella HOM05D005108 ORTHO05D006171 1.7e-48 196.1 120 79.2
MELO3C011386.2 Cucumis melo HOM05D005108 ORTHO05D006171 1.7e-48 196.1 120 81.7
A03p36700 Brassica napus HOM05D005108 ORTHO05D006171 3.0e-48 195.3 121 79.3
BraA03t12833Z Brassica rapa HOM05D005108 ORTHO05D006171 3.0e-48 195.3 121 79.3
Cc02_g32000 Coffea canephora HOM05D005108 ORTHO05D006171 5.1e-48 194.5 120 79.2
Aqoxy6G00412 Aquilegia oxysepala HOM05D005108 ORTHO05D006171 6.6e-48 194.1 122 80.3
HanXRQChr14g0446691 Helianthus annuus HOM05D005108 ORTHO05D006171 1.1e-47 193.4 120 80.0
AL3G22160 Arabidopsis lyrata HOM05D005108 ORTHO05D006171 1.5e-47 193.0 120 78.3
AT3G10690 Arabidopsis thaliana HOM05D005108 ORTHO05D006171 1.5e-47 193.0 120 78.3
CARHR085270 Cardamine hirsuta HOM05D005108 ORTHO05D006171 1.5e-47 193.0 120 78.3
unitig_747.g21367 Utricularia gibba HOM05D005108 ORTHO05D006171 2.5e-47 192.2 120 77.5
THA.LOC104826959 Tarenaya hassleriana HOM05D005108 ORTHO05D006171 3.3e-47 191.8 120 76.7
Aa31LG3G3550 Aethionema arabicum HOM05D005108 ORTHO05D006171 9.6e-47 190.3 120 75.8
ECA238G1701 Erigeron canadensis HOM05D005108 ORTHO05D006171 1.2e-46 189.9 121 77.7
ClCG08G010770 Citrullus lanatus HOM05D005108 ORTHO05D006171 1.6e-46 189.5 146 68.5
SGA_v2.0_scaffold164G38128 Striga asiatica HOM05D005108 ORTHO05D006171 3.6e-46 188.3 120 75.0
Lsat_1_v5_gn_2_64500 Lactuca sativa HOM05D005108 ORTHO05D006171 2.4e-45 185.7 120 75.0
SEGI_06230 Sequoiadendron giganteum HOM05D005108 ORTHO05D006171 3.1e-45 185.3 120 71.7
Oeu013050.3 Olea europaea HOM05D005108 ORTHO05D006171 1.3e-43 179.9 164 59.1
Cc10_g09260 Coffea canephora HOM05D005108 ORTHO05D006171 4.6e-41 171.4 132 68.2
Haze_11639 Corylus avellana HOM05D005108 ORTHO05D006171 1.9e-39 166.0 120 70.8
arahy.Tifrunner.gnm1.ann1.TCCJ6Y Arachis hypogaea HOM05D005108 ORTHO05D006171 1.3e-38 163.3 120 71.7
Mapoly0010s0185 Marchantia polymorpha HOM05D005108 ORTHO05D006171 3.1e-37 158.7 120 65.8
Pp3c8_18800 Physcomitrium patens HOM05D005108 ORTHO05D006171 3.1e-37 158.7 120 64.2
SMO200G0101 Selaginella moellendorffii HOM05D005108 ORTHO05D006171 6.6e-32 141.0 120 55.8
Lj7A491G32 Lonicera japonica HOM05D005108 ORTHO05D006171 2.4e-29 132.5 110 60.0
Ciclev10017460m.g Citrus clementina HOM05D005108 ORTHO05D006171 3.1e-29 132.1 77 85.7
CBR_g16891 Chara braunii HOM05D005108 ORTHO05D006171 1.4e-26 123.2 112 52.7
SHI21237 Sapria himalayana HOM05D005108 ORTHO05D006171 7.9e-25 117.5 84 70.2
Cpa.g.sc54.44 Carica papaya HOM05D005108 ORTHO05D006171 4.3e-23 111.7 67 82.1
MCO10G205 Micromonas commoda HOM05D005108 ORTHO05D006171 5.1e-16 88.2 124 37.1
Ciclev10014605m.g Citrus clementina HOM05D005108 ORTHO05D006171 1.5e-15 86.7 42 95.2
SHI21238 Sapria himalayana HOM05D005108 ORTHO05D006171 2.5e-15 85.9 42 90.5


User provided reference genes

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