Gene: Sopen01g040610

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g040610
  • Transcript Identifier Sopen01g040610.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 98209418-98229389 : positive

Gene Family Information

  • ID HOM05D005108
  • #Genes/#Species 147/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g040610.1

Descriptions

  • Description DNA GYRASE A (GYRA) | FUNCTIONS IN: DNA topoisomerase activity, catalytic activity, ATP binding | INVOLVED IN: DNA topological change, DNA metabolic process | LOCATED IN: mitochondrion, chloroplast, nucleoid | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: DNA gyrase, subunit A , DNA topoisomerase, type IIA, subunit A/C-terminal , DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta , DNA topoisomerase, type IIA, subunit A, alpha-helical , DNA topoisomerase, type IIA, central , DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel | BEST Arabidopsis thaliana protein match is: topoisomerase II
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006265
IEA
InterProDNA topological change
GO:0006259
IEA
InterProDNA metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003918
IEA
InterProDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0005524
IEA
InterProATP binding
GO:0003916
IEA
InterProDNA topoisomerase activity
GO:0034335
ISO
PLAZA Integrative OrthologyDNA negative supercoiling activity AT3G10690

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G10690
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G10690
GO:0016592
ISO
PLAZA Integrative Orthologymediator complex AT3G10690
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid AT3G10690

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal
IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal
IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat
IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta
IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily
IPR013760 DNA topoisomerase, type IIA-like domain superfamily
Mapman id Description
13.5.3.1 Cell cycle organisation.organellar DNA replication.DNA gyrase complex.subunit A