Gene: PGR044G2262
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR044G2262
- Transcript Identifier PGR044G2262.02
- Gene Type Coding gene
- Location NC_045134.1 : 761434-771173 : negative
Gene Family Information
- ID HOM05D005108
- #Genes/#Species 147/96
- Phylogenetic origin
- ID ORTHO05D006171
- #Genes/#Species 146/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pid XP_031374601.1
- name LOC116189187
- name XM_031518741.1
- id gene-LOC116189187
- uniprot A0A6P8BW78
Descriptions
- product DNA gyrase subunit A, chloroplastic/mitochondrial, transcript variant X2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006265 | IEA | GOA Database | DNA topological change | |
| GO:0006265 | IEA | InterPro | DNA topological change | |
| GO:0006259 | IEA | GOA Database | DNA metabolic process | |
| GO:0006259 | IEA | InterPro | DNA metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0034335 | ISO | PLAZA Integrative Orthology | DNA negative supercoiling activity | AT3G10690 |
| GO:0003916 | IEA | GOA Database | DNA topoisomerase activity | |
| GO:0003916 | IEA | InterPro | DNA topoisomerase activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0016853 | IEA | GOA Database | isomerase activity | |
| GO:0003918 | IEA | GOA Database | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | |
| GO:0003918 | IEA | InterPro | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042644 | ISO | PLAZA Integrative Orthology | chloroplast nucleoid | AT3G10690 |
| GO:0016592 | ISO | PLAZA Integrative Orthology | mediator complex | AT3G10690 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT3G10690 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G10690 |
| GO:0005694 | IEA | GOA Database | chromosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006691 | DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat |
| IPR013760 | DNA topoisomerase, type IIA-like domain superfamily |
| IPR002205 | DNA topoisomerase, type IIA, subunit A/C-terminal |
| IPR013757 | Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily |
| IPR013758 | DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta |
| IPR035516 | DNA gyrase/topoisomerase IV, subunit A, C-terminal |
| Mapman id | Description |
|---|---|
| 13.5.3.1 | Cell cycle organisation.organellar DNA replication.DNA gyrase complex.subunit A |